mRNA_Ecto-sp8_S_contig9845.31659.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: D7FMS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMS2_ECTSI) HSP 1 Score: 282 bits (722), Expect = 4.860e-91 Identity = 144/163 (88.34%), Postives = 147/163 (90.18%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLA--------R*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDGMDRGELLTPLLAQHLQ+KFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNS + FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKF+NTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG
Sbjct: 251 QLAEPFDGMDRGELLTPLLAQHLQSKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSDIERDVEVGNGGIDPPEFGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFINTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 413
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A835YNK2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK2_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.010e-53 Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*-----FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDG+DR LLTPL+A+HLQ ++ +AV+Q G +SGPKYG N D+A + + PF+ SN+ A R+AR +G Y+DQ+ +S L WV LRRNIIKRPFLATSEK V++CGASVL+ASAFHPS+ +KM AE AT F C++VR+GLEG
Sbjct: 204 QLAEPFDGIDRSPLLTPLIARHLQRRWRALAVTQVGPTSGPKYGPNARDLALALGADEAPFMRSNAEVAWRVARSGYLPEYGMYIDQEAVSPALAEWVTLRRNIIKRPFLATSEKLVDSCGASVLIASAFHPSFTDKMFNMAEDATAFPACIIVRRGLEG 363
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A6T7WU54_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T7WU54_9CRYP) HSP 1 Score: 162 bits (409), Expect = 1.290e-45 Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNS--VSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDG R E PL+A+HLQ ++ V VSQCG SSGPKYG NLL +A + S P SN A FGWYV Q + S L W +RRN++KRPFLAT+EK+++T GA VL+ASAFHPS+++KM AE A+ F+ C++VR+G EG
Sbjct: 122 QLAEPFDGTHRSESFAPLIARHLQQRWGAVVVSQCGPSSGPKYGPNLLQLALAL-SPDAPLAASNLDIAEAGADQPAFGWYVTQGDASGGLGRWGPIRRNVVKRPFLATAEKYLDTAGAGVLLASAFHPSFSDKMFLMAERASAFEACVIVRRGCEG 277
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A1G1P5S8_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_50_17 TaxID=1801857 RepID=A0A1G1P5S8_9BACT) HSP 1 Score: 144 bits (364), Expect = 3.700e-39 Identity = 79/155 (50.97%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
Q+AEPFDG+D+ ++TPLLA+H+Q VS GR+SGPK+G NLLD+A G L F+ N V +GWY+ Q+ +S +D WV+LR IIKRPFLAT E+FVN A +++ASAFHP YAEKM+T E A + G ++VR GLEG
Sbjct: 106 QIAEPFDGVDQSYMVTPLLARHVQI-LGYRVVSLVGRNSGPKFGNNLLDVAEG---LQAQFLKRN-VDLKCPKPDYGWYIHQKNLSRGMDRWVELRLQIIKRPFLATLERFVNPVRAQMIIASAFHPPYAEKMVTVGEGA-GYSGIIIVRNGLEG 254
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A1G1NX68_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_52_10 TaxID=1801858 RepID=A0A1G1NX68_9BACT) HSP 1 Score: 142 bits (358), Expect = 1.200e-37 Identity = 77/155 (49.68%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDG+D ++TPL+AQ +Q + N VS GR+SGPK+G NLLD+A +L F+ S+S A A +GW+V+QQ +S +D WV+ R IKRPFL+T E+F+N A + ++SAFHP Y EKM+T E A F G ++VR GLEG
Sbjct: 176 QLAEPFDGVDHSNMITPLIAQFIQ-RLNYRVVSHTGRNSGPKFGNNLLDLAK---ALRGRFLLSSSALADE-APAYGWFVNQQNLSPPIDQWVERRHQTIKRPFLSTLERFLNPFNAHIHISSAFHPPYGEKMLTICERA-GFPGSIIVRNGLEG 324
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A3B0W5T9_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0W5T9_9ZZZZ) HSP 1 Score: 137 bits (344), Expect = 1.090e-35 Identity = 74/155 (47.74%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
Q++EPFDG +R +TPL+A +QN AVS GR+SGPK+ NLL+IA +L T F+++ + + +GWY+ Q+ IS +DAWV+ R IIKRPFLAT E+F+N GA +L+ SAFHP+Y E M++ A+TA + G +VV+ GLEG
Sbjct: 171 QISEPFDGFNRSYFITPLIASAVQN-LGFRAVSLVGRNSGPKFATNLLNIAQ---ALDTSFLNT-AEELNKPKPDYGWYIHQKNISPAIDAWVEHRHQIIKRPFLATLERFINPVGAKILITSAFHPNYVETMLSIAQTA-GYAGIIVVQYGLEG 319
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: UPI000E0AB2C1 (anthranilate phosphoribosyltransferase n=1 Tax=Botryobacter ruber TaxID=2171629 RepID=UPI000E0AB2C1) HSP 1 Score: 135 bits (340), Expect = 4.600e-35 Identity = 79/158 (50.00%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEGESV 474
QLAEPFDG++ ++TP+LA Q V VS GRS+GPKY N LDI L PF+ NS A+ A +GW +DQQ +S LD WVD RR I KRPFLAT EK +N C A +LV S FH +Y +KM+T A A F G +V+++GLEG V
Sbjct: 172 QLAEPFDGVEHSYMITPILAHVFQEAGYPVVVSM-GRSAGPKYALNTLDI---YKELEAPFLQQNS-DLAKPAPKYGWALDQQVLSPALDQWVDRRRLIFKRPFLATLEKVLNPCHAGILVTSVFHITYIDKMITLAGMA-GFSGVIVLKRGLEGTLV 323
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A1G1NBX9_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_48_11 TaxID=1801856 RepID=A0A1G1NBX9_9BACT) HSP 1 Score: 134 bits (338), Expect = 9.140e-35 Identity = 73/155 (47.10%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDG+D + TPLLAQ++Q+ ++ GR+SGPK G NLLD+A +L P N+ +GWY +Q+ +S LD WV+LRR +KRP AT EKF+N A +++ SAFHP Y+EKM T AE A F +V+R GLEG
Sbjct: 176 QLAEPFDGVDHSYITTPLLAQYVQS-LGYRVINLVGRNSGPKVGNNLLDLAK---ALQIPLAAGNA-DLKNSKPSYGWYFNQENLSAPLDHWVELRRQTVKRPCFATLEKFLNPAQAQIIITSAFHPPYSEKMTTVAERA-GFPASIVIRNGLEG 324
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A1F3VXP5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium RIFCSPHIGHO2_02_FULL_44_7 TaxID=1797361 RepID=A0A1F3VXP5_9BACT) HSP 1 Score: 130 bits (327), Expect = 2.580e-34 Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNK-FNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDG+D L+TPLLA +QN F VV + GR+SGPK+G ++ D+ +++L + NS A FG++V Q +S +D WV++R+ IKRPFL+T E+F+N A +L+ SAFHP Y EKM+T AE A + G +V+R GLEG
Sbjct: 37 QLAEPFDGVDNSYLITPLLADFIQNLGFRVVTL--IGRNSGPKFGNSVSDV---ISALDIKPIRGNSDLAGPKPP-FGYFVHQANLSRAIDRWVEIRKQTIKRPFLSTLERFLNPTKAKILIVSAFHPPYTEKMITVAERA-GYSGAIVLRNGLEG 185
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Match: A0A1G1LML3_9BACT (Uncharacterized protein n=1 Tax=Omnitrophica WOR_2 bacterium GWA2_47_8 TaxID=1801840 RepID=A0A1G1LML3_9BACT) HSP 1 Score: 130 bits (328), Expect = 2.600e-33 Identity = 72/155 (46.45%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 1 QLAEPFDGMDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSTPFVHSNSVSAARLAR*FGWYVDQQEISLELDAWVDLRRNIIKRPFLATSEKFVNTCGASVLVASAFHPSYAEKMMTCAETATDFKGCMVVRKGLEG 465
QLAEPFDG+D+ ++TPL+AQ+LQ + N V+ GR+SGPK+G N LD+A +L+ P N FGWY++Q ++S LD WV+ R I+KRP AT EKF+N A +++ SAFH Y+EKM AE A F +V+R GLEG
Sbjct: 175 QLAEPFDGVDQSYMITPLVAQYLQAQ-NYRVVNLTGRNSGPKFGNNALDLAQ---ALNIPLAKGNQ-ELVNPKPAFGWYINQPDLSKSLDQWVERRWAIVKRPCFATLEKFLNPVKAQIIITSAFHAPYSEKMTRIAENA-GFPASIVIRNGLEG 323 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9845.31659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9845.31659.1 >prot_Ecto-sp8_S_contig9845.31659.1 ID=prot_Ecto-sp8_S_contig9845.31659.1|Name=mRNA_Ecto-sp8_S_contig9845.31659.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=67bp MDRGELLTPLLAQHLQNKFNVVAVSQCGRSSGPKYGQNLLDIATGMTSLSback to top mRNA from alignment at Ecto-sp8_S_contig9845:4896..6769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9845.31659.1 ID=mRNA_Ecto-sp8_S_contig9845.31659.1|Name=mRNA_Ecto-sp8_S_contig9845.31659.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1874bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9845:4896..6769+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9845:4896..6769+ >mRNA_Ecto-sp8_S_contig9845.31659.1 ID=mRNA_Ecto-sp8_S_contig9845.31659.1|Name=mRNA_Ecto-sp8_S_contig9845.31659.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=201bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9845:4896..6769+ (Ectocarpus species8 EcLAC_412)back to top |