mRNA_Ecto-sp8_S_contig984.31643.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: UPI00031EE39A (ankyrin repeat domain-containing protein n=1 Tax=Bradyrhizobium cosmicum TaxID=1404864 RepID=UPI00031EE39A) HSP 1 Score: 48.1 bits (113), Expect = 1.010e-5 Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 1 DEEGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAV 135
D+ G +PLHFAA G + V L+A GA VD RD++G TPL AV
Sbjct: 12 DDNGWSPLHFAAQAGSAEVTRVLIAAGATVDLRDSNGNTPLGKAV 56
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: A0A3M2R8S0_9HYPO (Uncharacterized protein n=1 Tax=Fusarium kuroshium TaxID=2010991 RepID=A0A3M2R8S0_9HYPO) HSP 1 Score: 49.7 bits (117), Expect = 1.410e-5 Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 7 EGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAVAC 141
+GRTPLHFAA RG+ +I+ LL LGA D D G +PL +A+ C
Sbjct: 1309 QGRTPLHFAARRGELDMINKLLELGADTDLTDKQGRSPLFHALDC 1353
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: A0A0D2LZX4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LZX4_9CHLO) HSP 1 Score: 48.9 bits (115), Expect = 2.610e-5 Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 1 DEEGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYA 132
D+ GR+PLH AA+R + + LLA GAAVDSRD G TPL A
Sbjct: 9 DDRGRSPLHRAAERSSAPAAARLLARGAAVDSRDGLGRTPLMVA 52
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: A0A2R5GLL6_9STRA (Acyl-CoA-binding domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLL6_9STRA) HSP 1 Score: 47.8 bits (112), Expect = 6.360e-5 Identity = 20/44 (45.45%), Postives = 31/44 (70.45%), Query Frame = 1
Query: 4 EEGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAV 135
++ T LH A DR + ++ +L+ LGA V++RD DG+TPL YA+
Sbjct: 183 DDNETLLHMACDRDDAAMVDALIELGADVEARDVDGLTPLGYAL 226
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: A0A553I0D5_9PEZI (Uncharacterized protein n=1 Tax=Xylaria flabelliformis TaxID=2512241 RepID=A0A553I0D5_9PEZI) HSP 1 Score: 47.8 bits (112), Expect = 6.740e-5 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 1
Query: 1 DEEGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPL 123
D+ GR LH AA RG ++ LLA+GA VD RDAD MTPL
Sbjct: 149 DKYGRAALHEAAARGSCDIVEILLAIGADVDVRDADDMTPL 189
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: A0A3S0ZWD3_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZWD3_ELYCH) HSP 1 Score: 46.2 bits (108), Expect = 6.820e-5 Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 1
Query: 7 EGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAV 135
+GR PLH+AAD GQ+ V+ LL+ GA V++ D G+TPL A+
Sbjct: 36 QGRLPLHYAADYGQTDVMEYLLSKGAKVNAEDKYGITPLLSAI 78
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: UPI00201E97F1 (myotrophin-like isoform X2 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E97F1) HSP 1 Score: 46.2 bits (108), Expect = 6.820e-5 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 10 GRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAV 135
GR+P+HFAAD GQ+ V+ L+A GA ++ D G+TPL A+
Sbjct: 35 GRSPIHFAADYGQTAVVEYLVANGAGINIEDQYGITPLLSAI 76
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: UPI001CD88387 (myotrophin n=1 Tax=Solea senegalensis TaxID=28829 RepID=UPI001CD88387) HSP 1 Score: 46.2 bits (108), Expect = 6.820e-5 Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 4 EEGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPL 123
E GR PLHFAAD GQ+ V++ LL++GA +++ D +TPL
Sbjct: 35 EGGRKPLHFAADFGQTEVVTFLLSMGADINAPDKHNLTPL 74
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: UPI001EAFAF0B (myotrophin-like isoform X1 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFAF0B) HSP 1 Score: 46.2 bits (108), Expect = 7.420e-5 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 10 GRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAV 135
GR+P+HFAAD GQ+ V+ L+A GA ++ D G+TPL A+
Sbjct: 40 GRSPIHFAADYGQTAVVEYLVANGAGINIEDQYGITPLLSAI 81
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Match: A0A485LJF0_9STRA (Aste57867_21654 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJF0_9STRA) HSP 1 Score: 47.4 bits (111), Expect = 9.230e-5 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 13 RTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYA 132
RTPLH+AA RGQ +LLA GA V++RDA G TPLA+A
Sbjct: 505 RTPLHWAAIRGQLETARALLAHGANVEARDAVGRTPLAWA 544 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig984.31643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig984.31643.1 >prot_Ecto-sp8_S_contig984.31643.1 ID=prot_Ecto-sp8_S_contig984.31643.1|Name=mRNA_Ecto-sp8_S_contig984.31643.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp DEEGRTPLHFAADRGQSTVISSLLALGAAVDSRDADGMTPLAYAVACENEback to top mRNA from alignment at Ecto-sp8_S_contig984:666..815+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig984.31643.1 ID=mRNA_Ecto-sp8_S_contig984.31643.1|Name=mRNA_Ecto-sp8_S_contig984.31643.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=150bp|location=Sequence derived from alignment at Ecto-sp8_S_contig984:666..815+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig984:666..815+ >mRNA_Ecto-sp8_S_contig984.31643.1 ID=mRNA_Ecto-sp8_S_contig984.31643.1|Name=mRNA_Ecto-sp8_S_contig984.31643.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp8_S_contig984:666..815+ (Ectocarpus species8 EcLAC_412)back to top |