mRNA_Ecto-sp8_S_contig98341.31636.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig98341.31636.1
Unique NamemRNA_Ecto-sp8_S_contig98341.31636.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: D7FHZ7_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ7_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.710e-36
Identity = 58/63 (92.06%), Postives = 59/63 (93.65%), Query Frame = 1
Query:   22 SPQQGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRRYA 210
            S   GFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHR +A
Sbjct:  103 SSHMGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRSFA 165          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A6H5JJZ4_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ4_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.950e-34
Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 1
Query:   22 SPQQGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRRYA 210
            S   GFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGS+AKADPCPVCGETHR +A
Sbjct:  199 SSHMGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSNAKADPCPVCGETHRSFA 261          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A7S4MMV8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MMV8_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 1.100e-11
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 1
Query:   22 SPQQGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRRY 207
            S + GFSC  A+++  W  IP   DIL+THMPPFN LDLAF   +   +  C  CG++H RY
Sbjct:  128 SSRMGFSCPRAEIKKKWKKIPRSTDILITHMPPFNILDLAFSSKALDNST-CSTCGKSHERY 188          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: X6NNU6_RETFI (Metallophos domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NNU6_RETFI)

HSP 1 Score: 60.5 bits (145), Expect = 5.100e-9
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 1
Query:   16 RLSPQQGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRRY 207
            RL  +  ++   + L G W AIP   DIL+TH PPFN LDLA+ +  +A  D C  CG+ H +Y
Sbjct:  242 RLPLKNAYATTESILRGKWDAIPSNTDILITHTPPFNILDLAWGK-DYANNDACAHCGDIHVKY 304          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A6A5BYB3_NAEFO (Metallophos domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BYB3_NAEFO)

HSP 1 Score: 49.7 bits (117), Expect = 3.280e-5
Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 1
Query:   22 SPQQGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHR 201
            S   GFS   + ++  W  IPE VDIL+TH+PPF  +DLA   G       C  C + H+
Sbjct:  215 SRNMGFSMSHSLIDQKWKEIPEDVDILVTHLPPFGVMDLA---GGSEPQQYCDYCKKNHK 271          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: D2V517_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V517_NAEGR)

HSP 1 Score: 49.3 bits (116), Expect = 4.510e-5
Identity = 22/59 (37.29%), Postives = 29/59 (49.15%), Query Frame = 1
Query:   31 QGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRRY 207
            QG +   +     W  I    DI+L+H PPFN LDLA+ + +      C VCG  H  Y
Sbjct:  221 QGMAFHSSNSYSYWKEIDSDSDIVLSHTPPFNILDLAWVKNNENPKQVCKVCGNIHDYY 279          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A812XEQ3_SYMMI (Mpped1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XEQ3_SYMMI)

HSP 1 Score: 48.9 bits (115), Expect = 6.290e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 1
Query:   46 RGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPC 177
            RGA+L+  W+ IP G+D+LLTH PP N LD+A   G   ++  C
Sbjct:  413 RGAELKEEWAKIPTGIDVLLTHTPPANILDIADHTGRQGQSIGC 456          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A812P8H8_9DINO (Mpped1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812P8H8_9DINO)

HSP 1 Score: 48.9 bits (115), Expect = 6.370e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 1
Query:   46 RGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPC 177
            RGA+L+  W+ IP G+D+LLTH PP N LD+A   G   ++  C
Sbjct:  125 RGAELKEEWAKIPTGIDVLLTHTPPANILDIADHTGRQGQSIGC 168          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A813D0S8_9DINO (Mpped1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813D0S8_9DINO)

HSP 1 Score: 48.9 bits (115), Expect = 6.410e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 1
Query:   46 RGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPC 177
            RGA+L+  W+ IP G+D+LLTH PP N LD+A   G   ++  C
Sbjct:  774 RGAELKEEWAKIPTGIDVLLTHTPPANILDIADHTGRQGQSIGC 817          
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Match: A0A1Q9CUL1_SYMMI (Metallophosphoesterase domain-containing protein 1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CUL1_SYMMI)

HSP 1 Score: 48.9 bits (115), Expect = 6.490e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 1
Query:   46 RGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPC 177
            RGA+L+  W+ IP G+D+LLTH PP N LD+A   G   ++  C
Sbjct: 1551 RGAELKEEWAKIPTGIDVLLTHTPPANILDIADHTGRQGQSIGC 1594          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98341.31636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FHZ7_ECTSI2.710e-3692.06Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JJZ4_9PHAE2.950e-3490.48Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A7S4MMV8_9EUKA1.100e-1148.39Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
X6NNU6_RETFI5.100e-943.75Metallophos domain-containing protein n=1 Tax=Reti... [more]
A0A6A5BYB3_NAEFO3.280e-540.00Metallophos domain-containing protein n=1 Tax=Naeg... [more]
D2V517_NAEGR4.510e-537.29Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A812XEQ3_SYMMI6.290e-547.73Mpped1 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A812P8H8_9DINO6.370e-547.73Mpped1 protein n=1 Tax=Symbiodinium necroappetens ... [more]
A0A813D0S8_9DINO6.410e-547.73Mpped1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A1Q9CUL1_SYMMI6.490e-547.73Metallophosphoesterase domain-containing protein 1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98341contigEcto-sp8_S_contig98341:12..224 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score131.0
Seed ortholog evalue2.3e-28
Seed eggNOG ortholog2880.D7FHZ7
Model size213
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.Calcineurin-like phosphoesterase
EggNOG OGsKOG3947@1,KOG3947@2759
Ec32 ortholog descriptionCalcineurin-like phosphoesterase domain, lpxH type
Ec32 orthologEc-12_006490.2
Cds size213
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145350.990666-CDS-Ecto-sp8_S_contig98341:11..2241681145350.990666-CDS-Ecto-sp8_S_contig98341:11..224Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig98341 12..224 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98341.31636.1prot_Ecto-sp8_S_contig98341.31636.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig98341 12..224 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig98341.31636.1

>prot_Ecto-sp8_S_contig98341.31636.1 ID=prot_Ecto-sp8_S_contig98341.31636.1|Name=mRNA_Ecto-sp8_S_contig98341.31636.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=71bp
MLACLRLSPQQGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDR
GSHAKADPCPVCGETHRRYA*
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mRNA from alignment at Ecto-sp8_S_contig98341:12..224-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig98341.31636.1 ID=mRNA_Ecto-sp8_S_contig98341.31636.1|Name=mRNA_Ecto-sp8_S_contig98341.31636.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=213bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98341:12..224- (Ectocarpus species8 EcLAC_412)
ATGTTGGCGTGCTTACGTTTATCCCCCCAACAGGGGTTCAGCTGCAGGGG CGCGCAGCTGGAGGGCGTGTGGTCGGCGATTCCGGAGGGCGTGGACATTC TCCTGACGCACATGCCGCCCTTCAACAGGCTGGATCTTGCGTTCGACCGC GGCAGCCACGCGAAAGCGGACCCTTGCCCGGTGTGCGGAGAGACTCATCG AAGGTATGCATAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig98341:12..224-

>mRNA_Ecto-sp8_S_contig98341.31636.1 ID=mRNA_Ecto-sp8_S_contig98341.31636.1|Name=mRNA_Ecto-sp8_S_contig98341.31636.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=213bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98341:12..224- (Ectocarpus species8 EcLAC_412)
ATGTTGGCGTGCTTACGTTTATCCCCCCAACAGGGGTTCAGCTGCAGGGG
CGCGCAGCTGGAGGGCGTGTGGTCGGCGATTCCGGAGGGCGTGGACATTC
TCCTGACGCACATGCCGCCCTTCAACAGGCTGGATCTTGCGTTCGACCGC
GGCAGCCACGCGAAAGCGGACCCTTGCCCGGTGTGCGGAGAGACTCATCG
AAGGTATGCATAG
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