mRNA_Ecto-sp8_S_contig98301.31629.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig98301.31629.1
Unique NamemRNA_Ecto-sp8_S_contig98301.31629.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: D7FM78_ECTSI (M20_dimer domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM78_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 8.520e-51
Identity = 86/90 (95.56%), Postives = 90/90 (100.00%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAAEHDCAVEVMTQ 270
            SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAV+AIAAEHDCAVEV+++
Sbjct:  209 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVKAIAAEHDCAVEVISK 298          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: A0A836C872_9STRA (M20_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C872_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.630e-26
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAAEHDCAVEVMTQ 270
            SGYP LG SAIDPLV VL  +    WP+SEELG TT+NIGLV GGQAANALAE +EA +MFRL  EPE VL  V++I    D  ++++TQ
Sbjct:  154 SGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQ 243          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: A0A8K1C4Z1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Z1_PYTOL)

HSP 1 Score: 108 bits (270), Expect = 1.460e-25
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAI 231
            SGYPHLG SAIDPL++VL+ +KH  WPSSEELG TT+NIG++ GGQAANALAE + A++MFRL   P+ +LD V +I
Sbjct:  665 SGYPHLGDSAIDPLIDVLYDLKHEKWPSSEELGATTLNIGIISGGQAANALAEHASAMLMFRLTTNPDEILDRVNSI 741          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: K3WGI3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGI3_GLOUD)

HSP 1 Score: 107 bits (268), Expect = 2.720e-25
Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAA 237
            SGYPHLG SAIDPL++VLH +KH  WP+SEELG TT+NIG++ GGQAANA+ E + A++MFRL   PE ++D V+ I +
Sbjct:  681 SGYPHLGDSAIDPLIDVLHDLKHEQWPNSEELGATTLNIGIINGGQAANAIPEYASAMLMFRLTTNPEKIMDRVKKIVS 759          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: A0A7S1C340_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C340_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.310e-24
Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAAEHDCAVEVM 264
            SGYPHLG SAIDPLV  L  +   AWPSS ELG+TT+N+G++ GGQAANA AE +EA++MFR I +P  +L   RA+AA++D  VEV+
Sbjct:  342 SGYPHLGKSAIDPLVAALGDLAKTAWPSSPELGDTTLNVGIISGGQAANATAEHAEALLMFRAISDPNELLAMTRAVAAKYD-GVEVV 428          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: W7U799_9STRA (Peptidase dimerization domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U799_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 7.370e-24
Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAAEHDCAVEVMT 267
            SGYP LG SAIDPLV+ L  +K   WP +EELG TT+NIGL++GG AANALA  +EA ++FRLI  PE VL+ VRA   +    VEV+T
Sbjct:   22 SGYPSLGKSAIDPLVDALQDLKRAHWPKNEELGATTLNIGLLKGGHAANALAAEAEATLVFRLITPPEQVLETVRATVGDR-ADVEVIT 109          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: A0A5D6Y8X3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8X3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.890e-23
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAI 231
            SGYPHLG SAIDPL++VLH +KH  WPSS+ELG TT+NIG++ GGQAANA+ + + A++MFRL   P+ +L  V  I
Sbjct:  664 SGYPHLGESAIDPLIDVLHDLKHEPWPSSDELGTTTLNIGMISGGQAANAIPDFASAMLMFRLTTAPDEILARVERI 740          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: A0A3R7HS81_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HS81_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.950e-23
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAA 237
            SGYPHLG SAIDP+++VL+ +K  AWPSSEE G T +NIGL+ GGQAANALAE S A++MFRL  EP+ +   V  I A
Sbjct:  668 SGYPHLGDSAIDPMIDVLYDLKKEAWPSSEECGSTDLNIGLLNGGQAANALAEESSAMLMFRLTTEPDVIYKRVEEIVA 746          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: D0MR59_PHYIT (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=D0MR59_PHYIT)

HSP 1 Score: 101 bits (251), Expect = 5.390e-23
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAIAA 237
            SGYPHLG SAIDP+++VL+A+K   WP++EE G T +NIGL+ GGQAANALAE S A++MFRL+ EP  + + V  I A
Sbjct:  688 SGYPHLGDSAIDPMIDVLYALKKENWPTTEEYGNTDLNIGLLNGGQAANALAEQSSAMLMFRLVTEPSVIYERVEEIVA 766          
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Match: A0A7S2MUF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUF8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 9.950e-23
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 1
Query:    1 SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVRAI 231
            SGYP LG SAIDPLV+VL+ +K+  WPSS ELG TT+NIG++ GGQAAN LAE + A +MFR+  +P+ + D V +I
Sbjct:   32 SGYPELGDSAIDPLVDVLYELKNEDWPSSPELGATTLNIGMIHGGQAANVLAEFASAFLMFRVTHDPQELYDRVVSI 108          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98301.31629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM78_ECTSI8.520e-5195.56M20_dimer domain-containing protein n=2 Tax=Ectoca... [more]
A0A836C872_9STRA3.630e-2661.11M20_dimer domain-containing protein n=1 Tax=Tribon... [more]
A0A8K1C4Z1_PYTOL1.460e-2564.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WGI3_GLOUD2.720e-2560.76Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S1C340_9STRA2.310e-2459.09Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
W7U799_9STRA7.370e-2458.43Peptidase dimerization domain-containing protein n... [more]
A0A5D6Y8X3_9STRA2.890e-2359.74Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3R7HS81_9STRA3.950e-2362.03Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
D0MR59_PHYIT5.390e-2359.49Uncharacterized protein n=22 Tax=Phytophthora TaxI... [more]
A0A7S2MUF8_9STRA9.950e-2358.44Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig98301contigEcto-sp8_S_contig98301:57..329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score173.3
Seed ortholog evalue5.1e-41
Seed eggNOG ortholog2880.D7FM78
Model size273
KEGG rclassRC00064,RC00300,RC01151
KEGG koko:K01438,ko:K08963
KEGG ReactionR00669,R04420,R09107
KEGG Pathwayko00220,ko00270,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00270,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028,M00034,M00845
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006508,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009636,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0042219,GO:0042221,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0070011,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1990748
Exons1
EggNOG free text desc.aminoacylase activity
EggNOG OGsCOG0624@1,KOG2275@2759
EC3.5.1.16,5.3.1.23
Cds size273
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145350.5638165-CDS-Ecto-sp8_S_contig98301:56..3291681145350.5638165-CDS-Ecto-sp8_S_contig98301:56..329Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig98301 57..329 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig98301.31629.1prot_Ecto-sp8_S_contig98301.31629.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig98301 57..329 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig98301.31629.1

>prot_Ecto-sp8_S_contig98301.31629.1 ID=prot_Ecto-sp8_S_contig98301.31629.1|Name=mRNA_Ecto-sp8_S_contig98301.31629.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=91bp
SGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANA
LAEASEAIVMFRLIQEPEGVLDAVRAIAAEHDCAVEVMTQ*
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mRNA from alignment at Ecto-sp8_S_contig98301:57..329+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig98301.31629.1 ID=mRNA_Ecto-sp8_S_contig98301.31629.1|Name=mRNA_Ecto-sp8_S_contig98301.31629.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=273bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98301:57..329+ (Ectocarpus species8 EcLAC_412)
AGTGGCTATCCCCACCTGGGGGTGTCGGCCATAGACCCACTGGTGGAAGT GCTCCATGCCATCAAGCACCGCGCGTGGCCGTCCAGCGAAGAGCTAGGAG AGACGACCGTCAACATCGGCCTCGTCGAGGGCGGTCAGGCGGCCAACGCT TTGGCGGAGGCTAGCGAGGCCATCGTCATGTTTCGCCTAATTCAGGAGCC GGAGGGGGTGCTCGACGCCGTCAGGGCTATCGCGGCGGAGCACGACTGCG CGGTTGAGGTGATGACGCAATAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig98301:57..329+

>mRNA_Ecto-sp8_S_contig98301.31629.1 ID=mRNA_Ecto-sp8_S_contig98301.31629.1|Name=mRNA_Ecto-sp8_S_contig98301.31629.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98301:57..329+ (Ectocarpus species8 EcLAC_412)
AGTGGCTATCCCCACCTGGGGGTGTCGGCCATAGACCCACTGGTGGAAGT
GCTCCATGCCATCAAGCACCGCGCGTGGCCGTCCAGCGAAGAGCTAGGAG
AGACGACCGTCAACATCGGCCTCGTCGAGGGCGGTCAGGCGGCCAACGCT
TTGGCGGAGGCTAGCGAGGCCATCGTCATGTTTCGCCTAATTCAGGAGCC
GGAGGGGGTGCTCGACGCCGTCAGGGCTATCGCGGCGGAGCACGACTGCG
CGGTTGAGGTGATGACGCAATAG
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