mRNA_Ecto-sp8_S_contig982.31609.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig982.31609.1 vs. uniprot
Match: D8LJM5_ECTSI (Kinesin family member 3A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM5_ECTSI) HSP 1 Score: 843 bits (2177), Expect = 1.980e-261 Identity = 611/723 (84.51%), Postives = 628/723 (86.86%), Query Frame = 1
Query: 172 KLSTVIHSQAGKLAVQHRAFVNLQARLQQQLGEYQKKCTLQQQEITHLRSTIETMERETGSRLGGDEVEEMQRAMMAWQAQATEAQQELRLAARQLEGVRGDGLRHRADRDRLVLELEAAEAREKALLGYWRQLQAALGLGTTTPMPADRVVAAVNRLQEEREKEASAKAKQEQALSARTDGIRECKDLEEKAEALLREKETRQAELQGLEDDKKKAVERLEKLREDRLETEAAIAREEARIRTTTTRLAKVEEAVGEALDAAGLRTKLDEASAARESALAETAAAKREAEAIVSSRDEAVRTSNSTRKKLEAFEGTLDRVSRETRAVLDEKERELCRLQGVLGRKGAVAKRVQSERRTEQQAHAKGIEELRQSLAASRAETSRLTADLAKTRAGAARGKEDAGXXXXXXXXXXXXXXXXXXXXXGAREDAEKAVSALRERLGERERDXXXXXXXXXXXXXXXXXXTLELEGSRASEAQARREASGSEADLATALAREEGAVSRLREVEDTAARRRVELEGRLAAAEEACREGAXXXXXXXXXXREEEVVRGRAKLAQVVARRDEKVRPDGEEAERRVKQLEQEHGESLSAERRQAREALRLAVADAKARHDREAAAALAALSAENSLALARAIEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------ERRFARQSQEHASEIARLEEEASLAAVAAAG 2322
KLSTVIHSQAGKLAVQHRAFVNLQARLQQQLGEYQKKCTLQQQEITHLRSTIETMERETGSRLGGDEVEEMQRAMMAWQAQAT AQQELRLAARQLEGVRGDGLRHRADRDRLVLELEAAEAREKALLGYWRQLQAALGLGTTTPMP DRVVAAVN LQEEREK EQA ARTDGIRECKDLEE+AEAL REKETRQAEL+GLEDDKKKA+ERLEKLREDRLETEA IAREEARIRTT TRL KVEEAVGEALDAAGLRTKLDEASAARESAL E AAKRE+EA+VSS FEG LDRVSRETRAVLDEKE EL RLQG LGRK AVAKRV SER+TEQQAHAKGIEELRQS+AASRAETSRL ADLAKTRAGAARGKEDAGXXXXXXXXXXXXXXXXXXXXXGAR+DAEKA+S LRERLGERERD LELE SRASEAQARR+ASGS+ADL ALAREE AV LREVE+TAARRR ELEGRLAAAE+ACREGA REEEV RGRAKLA+VVARRDEKV DGEE ERRVKQLEQEH ESLSAERRQARE LRLAVADAKARHDREAAAALAALS+ENSLALARAIEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERR ARQ +EHASEIARL+EEASLAAVAAAG
Sbjct: 524 KLSTVIHSQAGKLAVQHRAFVNLQARLQQQLGEYQKKCTLQQQEITHLRSTIETMERETGSRLGGDEVEEMQRAMMAWQAQATAAQQELRLAARQLEGVRGDGLRHRADRDRLVLELEAAEAREKALLGYWRQLQAALGLGTTTPMPPDRVVAAVNHLQEEREKXXXXXXXXEQASRARTDGIRECKDLEEQAEALAREKETRQAELRGLEDDKKKAMERLEKLREDRLETEATIAREEARIRTTVTRLTKVEEAVGEALDAAGLRTKLDEASAARESALQEAEAAKRESEALVSSXXXXXXXXXXXXXXXXXFEGNLDRVSRETRAVLDEKEAELRRLQGALGRKDAVAKRVLSERKTEQQAHAKGIEELRQSVAASRAETSRLKADLAKTRAGAARGKEDAGXXXXXXXXXXXXXXXXXXXXXGARQDAEKAMSGLRERLGERERDAASAQEDLVKANQAVSKLALELESSRASEAQARRKASGSKADLTAALAREEEAVFHLREVEETAARRRGELEGRLAAAEKACREGAGAAVAA----REEEVARGRAKLAEVVARRDEKVGRDGEETERRVKQLEQEHEESLSAERRQAREVLRLAVADAKARHDREAAAALAALSSENSLALARAIEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAAEDERRLARQLEEHASEIARLQEEASLAAVAAAG 1242
BLAST of mRNA_Ecto-sp8_S_contig982.31609.1 vs. uniprot
Match: A0A6H5K0I5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I5_9PHAE) HSP 1 Score: 371 bits (953), Expect = 1.300e-100 Identity = 325/410 (79.27%), Postives = 333/410 (81.22%), Query Frame = 2
Query: 2384 AVEAARRQQAVADEAKHERAVRELEEDFAKRRELLVEGARVGLEEAVTEERAAAEGEARRXXXXXEERAREDAXXXXXXXXXXXXREMNKALKAAARLTLKSQRDAQASLESEKARMAEELDQRLRNAQETHLAEKTEELRGQAERLTREAAAAVAKVEAESRAAVAASAAAAEEQAELLRGRLERVPGEVKAELEREFQEKERLVREGMQQRLDSQAAGMEILWRAELERSLALRTEELEASHEASLKDATAAAAAEREEAVRQVRAELARSEEACRSARESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADRRRRQEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQIAGLETRVERAIAAARDGALEARAAERRAMETE 3613
AVEA AVADEAKHERAVRELEEDFAKRRELLVEGARVGLEEAVT R+AAEGEARR X XXXXXXXXXX REMNKAL+AAARLTLKSQRDAQASLESEKARMAEEL+QRLRN QETHLAEKTEELRGQAERLTREAAAAVAKVEAESRAA AEEQAELLR RLERVPGEV+AELEREFQEKERLVREGMQQ LDSQAAGME LWRAELERSLALRTEELEASHEASLK ATAAAAAER+EAVRQVR ELARS+EACRSARESA AADRRRRQE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + AGLETRVE A AAARD ALEARAAERRAME E
Sbjct: 413 AVEAXXXXXAVADEAKHERAVRELEEDFAKRRELLVEGARVGLEEAVTAARSAAEGEARRRVREXXXXXXXXXXXXXXXXXXXKEREMNKALRAAARLTLKSQRDAQASLESEKARMAEELEQRLRNEQETHLAEKTEELRGQAERLTREAAAAVAKVEAESRAAXXXXXXXAEEQAELLRERLERVPGEVRAELEREFQEKERLVREGMQQCLDSQAAGMETLWRAELERSLALRTEELEASHEASLKGATAAAAAERDEAVRQVRDELARSKEACRSARESAAASAQREQRLLAKERKAASAAGVAAVEAEAADRRRRQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEPHVIFFK-AGLETRVECATAAARDEALEARAAERRAMEAE 821 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig982.31609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig982.31609.1 >prot_Ecto-sp8_S_contig982.31609.1 ID=prot_Ecto-sp8_S_contig982.31609.1|Name=mRNA_Ecto-sp8_S_contig982.31609.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=955bp QVSAEIETLKHRLHQRSLELSQLNSANESGQAENASLRDKLEGLSSTNERback to top mRNA from alignment at Ecto-sp8_S_contig982:3..17379- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig982.31609.1 ID=mRNA_Ecto-sp8_S_contig982.31609.1|Name=mRNA_Ecto-sp8_S_contig982.31609.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=17377bp|location=Sequence derived from alignment at Ecto-sp8_S_contig982:3..17379- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig982:3..17379- >mRNA_Ecto-sp8_S_contig982.31609.1 ID=mRNA_Ecto-sp8_S_contig982.31609.1|Name=mRNA_Ecto-sp8_S_contig982.31609.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2865bp|location=Sequence derived from alignment at Ecto-sp8_S_contig982:3..17379- (Ectocarpus species8 EcLAC_412)back to top |