mRNA_Ecto-sp8_S_contig97969.31574.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: D7FQ21_ECTSI (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ21_ECTSI) HSP 1 Score: 114 bits (284), Expect = 8.340e-30 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQ 156
GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQ
Sbjct: 95 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQ 146
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A7Y2X8B5_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y2X8B5_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 1.850e-22 Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GYAGGT+ENPTY ++C+G TGHAEV + YDP V+TFDELLEVFWKTHDPT ++
Sbjct: 59 GYAGGTVENPTYEEICTGTTGHAEVTQITYDPGVITFDELLEVFWKTHDPTTLN 112
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A537WTQ4_9ACTN (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537WTQ4_9ACTN) HSP 1 Score: 92.8 bits (229), Expect = 2.140e-22 Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GY+GGT+E+PTYR VC+GRTGHAEVV L +DP +VT+D+LLEVFW HDPTQVD
Sbjct: 42 GYSGGTVEDPTYRQVCTGRTGHAEVVQLVFDPDLVTYDQLLEVFWAMHDPTQVD 95
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A7W1GJE8_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W1GJE8_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 2.440e-22 Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GY+GG MENPTYRDVC+GRTGHAEVV +EYDP V ++ELL VFW+ HDPTQ++
Sbjct: 34 GYSGGNMENPTYRDVCTGRTGHAEVVEVEYDPAQVRYEELLRVFWENHDPTQLN 87
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A7W0ZJ27_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W0ZJ27_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 8.430e-22 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GY GG+M NPTYRDVC+GRTGHAEVV +EYDPT V ++ELL VFW HDPTQ++
Sbjct: 41 GYLGGSMPNPTYRDVCTGRTGHAEVVEVEYDPTQVAYEELLNVFWDNHDPTQLN 94
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A1W2GL41_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2GL41_9BACT) HSP 1 Score: 91.7 bits (226), Expect = 8.530e-22 Identity = 38/54 (70.37%), Postives = 48/54 (88.89%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GY GG ++NPTY++VCSG TGHAEV+ + YDP+V+TFDELLEVFWKTHDPT ++
Sbjct: 52 GYMGGEVKNPTYKEVCSGTTGHAEVLQITYDPSVITFDELLEVFWKTHDPTTLN 105
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A7W0GT74_9BACT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W0GT74_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 8.860e-22 Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQ 156
GY GG +ENP+YRDVC+GRTGHAEVV +EYDP++V+++ELL VFW+ HDPTQ
Sbjct: 30 GYLGGNVENPSYRDVCTGRTGHAEVVEVEYDPSIVSYEELLRVFWENHDPTQ 81
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A3B8IW54_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8IW54_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 1.130e-21 Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GY GGT NPTYR+VCSG TGHAEV + YDP+V+TFDELLEVFW THDPT ++
Sbjct: 33 GYTGGTTTNPTYREVCSGTTGHAEVTRITYDPSVITFDELLEVFWVTHDPTTLN 86
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: A0A2W4QVE1_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4QVE1_9BACT) HSP 1 Score: 91.7 bits (226), Expect = 1.370e-21 Identity = 37/54 (68.52%), Postives = 48/54 (88.89%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVD 162
GY+GGT+ENPTY+ VC+G TGHAEVV + YDP+V+T+DELLE+FW THDPT ++
Sbjct: 69 GYSGGTVENPTYKQVCTGTTGHAEVVQITYDPSVITYDELLEIFWHTHDPTTLN 122
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Match: UPI0019A03DC2 (Peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019A03DC2) HSP 1 Score: 90.9 bits (224), Expect = 1.700e-21 Identity = 37/51 (72.55%), Postives = 47/51 (92.16%), Query Frame = 1
Query: 1 GYAGGTMENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPT 153
GY+GG ++NPTYR+VCSG TGHAEV+ + YDP+V+T+DELLEVFW+THDPT
Sbjct: 51 GYSGGKIKNPTYREVCSGLTGHAEVIQITYDPSVITYDELLEVFWETHDPT 101 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97969.31574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig97969.31574.1 >prot_Ecto-sp8_S_contig97969.31574.1 ID=prot_Ecto-sp8_S_contig97969.31574.1|Name=mRNA_Ecto-sp8_S_contig97969.31574.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=48bp MENPTYRDVCSGRTGHAEVVLLEYDPTVVTFDELLEVFWKTHDPTQVDback to top mRNA from alignment at Ecto-sp8_S_contig97969:141..562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig97969.31574.1 ID=mRNA_Ecto-sp8_S_contig97969.31574.1|Name=mRNA_Ecto-sp8_S_contig97969.31574.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=422bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97969:141..562- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig97969:141..562- >mRNA_Ecto-sp8_S_contig97969.31574.1 ID=mRNA_Ecto-sp8_S_contig97969.31574.1|Name=mRNA_Ecto-sp8_S_contig97969.31574.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=144bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97969:141..562- (Ectocarpus species8 EcLAC_412)back to top |