mRNA_Ecto-sp8_S_contig9792.31564.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A6H5KIB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB4_9PHAE) HSP 1 Score: 526 bits (1356), Expect = 7.150e-188 Identity = 256/266 (96.24%), Postives = 258/266 (96.99%), Query Frame = 3
Query: 177 MSNAPSAVRSGVLIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKGVSESEIKWSMSRLPVFQRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELVGSREMAA 974
MSNAPSAVRSGVLIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSL +KGVSESEIKWSMSRLPV+QRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIR LFGKGISTNGG FTEDGRLDVQPYHTNQA PH CRLCPPNMCKG IVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRE IEKEEGGPMACRVVPWQKGEDVYSAFESELVG REMAA
Sbjct: 1 MSNAPSAVRSGVLIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLWQKGVSESEIKWSMSRLPVYQRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRSLFGKGISTNGGVFTEDGRLDVQPYHTNQAAPHSCRLCPPNMCKGSIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRELIEKEEGGPMACRVVPWQKGEDVYSAFESELVGVREMAA 266
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: D8LNT8_ECTSI (Putative phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT8_ECTSI) HSP 1 Score: 360 bits (925), Expect = 1.310e-123 Identity = 172/179 (96.09%), Postives = 172/179 (96.09%), Query Frame = 3
Query: 438 MLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELVGSREMAA 974
MLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGL GKGISTN G FTEDGRLDVQPYHTNQA PHGC LCPPNMCKG IVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELVG REMAA
Sbjct: 1 MLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLIGKGISTNSGVFTEDGRLDVQPYHTNQASPHGCSLCPPNMCKGSIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELVGGREMAA 179
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A836CAM3_9STRA (Phosphatase phospho-type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM3_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.360e-72 Identity = 126/251 (50.20%), Postives = 162/251 (64.54%), Query Frame = 3
Query: 210 VLIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKGVSESEIKWSMSRLPVFQRMLDAVCLAGRVGAQQA----VVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESEL 950
VLIVWDFD SLV++NSDTWV++ L EL+PEF+RLR EE LGWT+IM RQM +L K GV + +I M+ L + RM++ V L GA QA ++SDANT FIE HHGIRG F I TNG + DGRL V P+H A PH C LCPPN+CKGG+++ + P + R+IY+GDGGGD+CPA R+ GDL+LAR + R +GL ++ K E G +A W GED+Y F +EL
Sbjct: 9 VLIVWDFDHSLVDDNSDTWVVQALRPELLPEFKRLRVEEGLGWTEIMGRQMEALWKLGVKQEDIDRCMTALALQPRMVETVQLIQSSGATQASPPMILSDANTHFIEAITAHHGIRGAFASVI-TNGSEYAPDGRLLVTPHHPAHA-PHACALCPPNLCKGGVLD-TIKGP-------YQRIIYVGDGGGDFCPATRMSAGDLVLARHAED--RAYGLWHKLMKCEPGQVAAEARTWATGEDLYRIFAAEL 247
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: K3WZN6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZN6_GLOUD) HSP 1 Score: 199 bits (507), Expect = 4.700e-59 Identity = 111/268 (41.42%), Postives = 165/268 (61.57%), Query Frame = 3
Query: 186 APSAVRSGVLIVWDFDWSLVNENSDTWVIKQLGQELMPEF-RRLREEENLGWTQIMNRQMRSLS--KKGVSESEIKWSMSRLPVFQRMLDAVCLAGRV-GAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDG--RLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELVGSREMA 971
APSA VL+V+D+DWSLVNENSDT+V +QL L+ R R + WT++M+ +R L+ + VS + I+ +++R+PV +MLDAV LA GA +VSDANTV+I+ + HHG+ + + TN G F + RL V+PYH PHGC CP NMCKG I++ +L+ +R F V+Y+GDG GD+CP+ RL P D++ AR G+ +GL ++++ + +A +VVPW GED+Y+ F++ G + A
Sbjct: 7 APSAHAPSVLVVFDYDWSLVNENSDTFVFRQLHPALLETLAERYRLLQPPSWTKLMDELLRDLALQQPHVSAAIIRDTLARIPVLDKMLDAVRLAVETHGAVLKIVSDANTVYIDAMVAHHGLERHVSE-VFTNPGFFDDADAKRLRVEPYHALHLDPHGCANCPANMCKGQILDKILS------ERRFSHVLYVGDGTGDFCPSTRLSPNDVVFARANDADGKSYGLLKKLQANQD-KVAAKVVPWSSGEDIYNQFDAFFQGLQAQA 266
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A8K1CMI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMI0_PYTOL) HSP 1 Score: 198 bits (504), Expect = 7.670e-59 Identity = 114/253 (45.06%), Postives = 159/253 (62.85%), Query Frame = 3
Query: 204 SGVLIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKG--VSESEIKWSMSRLPVFQRMLDAVCLAGRV-GAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDG-RLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESEL 950
+ L+V+D+DWSLVNENSDT++ K L EL+ E R E+ WT++M+ + L + V+ +IK +++++P+ RMLDAV LA GA +VSDAN+V+I+ L HH + + + TN F D RL V+PYH +A PHGC LCP NMCKG I++ + A +A+DRVIYIGDG GD+C ALRL D++LAR E G+K+GL +R+ + RVV W+ GEDVY+ FESE
Sbjct: 2 ASTLVVFDYDWSLVNENSDTFIFKLLCPELLDELSS-RLEQQPSWTRVMDDLLGELHSRQPHVTPRDIKATLAQVPILPRMLDAVRLAVETHGATVKIVSDANSVYIQSMLDHHQLHEHITE-VVTNPAAFEADSSRLRVRPYHPLEAEPHGCPLCPKNMCKGRILDRIHRA------KAYDRVIYIGDGPGDFCAALRLTSDDVVLARADEEDGKKYGLLKRLIAN-AEQVQARVVQWRSGEDVYATFESEF 245
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A813F083_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F083_POLGL) HSP 1 Score: 184 bits (467), Expect = 3.530e-53 Identity = 109/261 (41.76%), Postives = 153/261 (58.62%), Query Frame = 3
Query: 213 LIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKGVSESEIKWSMSRLPVFQRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRK-FGLRERIEKE----------EGGP--MACRVVPWQKGEDVYSAFESELVG 956
L+VWD+DWSL+N NSDT+V++QL EL+ F ++ WTQ+M+ Q+ +L GVS ++++ ++ +PV + L A+ LA + A+Q V+SDANTVFIE FL +R F K + TN F + GRL ++PYH HGC LCP N+CKG ++E L + A RVIY+GDGGGD+CPA LR GD LL R FGL+ R+EK +G P +A + PW G+DV++ L G
Sbjct: 7 LVVWDYDWSLINANSDTYVVEQLRPELLGNFDA--PGASIAWTQLMHEQVGALHASGVSRAQLESCVAAVPVHEGCLRAIRLAAPL-AEQVVLSDANTVFIESFLLRAELRQCF-KEVITNPAEFDDQGRLHIRPYHGGPQH-HGCPLCPANLCKGQVLERLRSTLG-----AESRVIYVGDGGGDFCPACDLRAGDALLVRSPPSPPLDHFGLKRRLEKSLQVGRQEVTRKGTPAAVAADIHPWHSGDDVFAILSKLLNG 257
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A1Q9DPG6_SYMMI (Inorganic pyrophosphatase 3 n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DPG6_SYMMI) HSP 1 Score: 181 bits (460), Expect = 2.310e-52 Identity = 111/255 (43.53%), Postives = 145/255 (56.86%), Query Frame = 3
Query: 213 LIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKGVSESEIKWSMSRLPVFQRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGG-RKFGLRERIE-----KEEGGP--MACRVVPWQKGEDVYSAFESELV 953
L+VWD+DWSL+N NSDT+V+++L ELM F + GWT +M+RQM ++PVF+ L AV A A Q V+SDANTVFIE FL+ G+R F + I TN F DG L V+P+H + PHGC LCP N+CKG ++ LLA D RV+Y+GDGGGD+CPA LR D+LL R +FGL+ R+E K++G + RV WQ GEDV +A LV
Sbjct: 15 LLVWDYDWSLINTNSDTFVVEKLRPELMARFD---SPCSGGWTALMDRQM------------------KVPVFEENLLAVRRAAEAEAAQIVLSDANTVFIEAFLQSAGLRSCFSE-IITNAAEFNSDGCLRVRPFH--EGPPHGCPLCPDNLCKGLVLRRLLA------DYQPQRVLYVGDGGGDFCPACELRKEDVLLCRAPPSPPLTRFGLKRRLEGPPEVKQDGSAAKVVARVTEWQSGEDVLAAITDFLV 239
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A812IGW7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812IGW7_9DINO) HSP 1 Score: 177 bits (449), Expect = 2.850e-51 Identity = 96/195 (49.23%), Postives = 126/195 (64.62%), Query Frame = 3
Query: 213 LIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKGVSESEIKWSMSRLPVFQRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRP 797
L+VWD+DWSL+N NSDT+V+++L ELM FR + GWT +M+RQM++L GVS ++ +S +PVF+ L AV A A Q V+SDANTVFIE FL+ G+R F + I TN F DG L V+P+H + PHGC LCP N+CKG ++ LLA D RV+Y+GDGGGD+CPA LRP
Sbjct: 15 LLVWDYDWSLINTNSDTFVVEKLRPELMAHFRSPCSD---GWTALMDRQMKALFDLGVSRGLVEQCVSSVPVFEENLLAVRRAAEAEAAQIVLSDANTVFIEAFLQSAGLRSCFSE-IITNAAEFNYDGCLHVRPFH--EGPPHGCPLCPDNLCKGLVLRRLLA------DYRPQRVLYVGDGGGDFCPACELRP 197
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A8K1FNF3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNF3_PYTOL) HSP 1 Score: 178 bits (451), Expect = 8.210e-51 Identity = 108/270 (40.00%), Postives = 160/270 (59.26%), Query Frame = 3
Query: 177 MSNAPSAVRSGVLIVWDFDWSLVNENSDTWVIKQLGQELMPE-FRRLREEENLGWTQIMNRQMRSLSKKG--VSESEIKWSMSRLPVFQRMLDAVCLA-GRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTF-TEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCPALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELVGSREMA 971
MS +PS LI++D+D SLVN++SD ++ KQL EL+ + F+R++++ + ++ + L ++ ++E+EI+ +++ +PV RMLDAV A R GA ++SDANTV+I+ L HH + + + TN F T+ RL Q YH PHGC CP NMCKG I++ L + DR+IY+GDG GD+CPALRL D +LAR E G+ +GL ER+ E G + +VV W+ GEDVY FE L + E +
Sbjct: 1 MSASPST-----LIIFDYDLSLVNDDSDQFIYKQLCPELLMDIFKRMKQDSK--YIPKVDDVLEELHERRPELTENEIRQALAEIPVLPRMLDAVRRAVDRHGASVKIISDANTVYIQSMLDHHQLNSHITE-VYTNPSAFDTDKPRLLYQSYHPEHEKPHGCEHCPTNMCKGRILDDLR------NNSPVDRIIYVGDGKGDFCPALRLTSRDTILARANDEDGKSYGLLERLV-EYSGQVQAQVVTWRTGEDVYEYFERALTSTTEYS 255
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Match: A0A6G0W2G0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W2G0_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.740e-50 Identity = 93/248 (37.50%), Postives = 149/248 (60.08%), Query Frame = 3
Query: 213 LIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEENLGWTQIMNRQMRSLSKKGVSESEIKWSMSRLPVFQRMLDAVCLAGRVGAQQAVVSDANTVFIEEFLKHHGIRGLFGKGISTNGGTFTEDGRLDVQPYHTNQAVPHGCRLCPPNMCKGGIVEGLLAAPDGGEDRAFDRVIYIGDGGGDYCP-ALRLRPGDLLLARDGGEGGRKFGLRERIEKEEGGPMACRVVPWQKGEDVYSAFESELV 953
L+++D+DWSL+N+NSDT+V +QL EL R+L + WTQ +++ +L+K ++ ++ +++R+P+ ML+AV A G + +VSDANTVFI+ L+HH + + K + TN F E L V P+H + PHGC CPPNMCKG IV+ + A+ + + ++IYIGDGGGD+CP A +L D++ AR+ ++ L R++ G ++ V PW G D+ + F+ +V
Sbjct: 4 LVIFDYDWSLINDNSDTYVFQQLQPELYTHLRQL-SSSGVQWTQAVDQ---TLAKLTCTKEQLIDALARIPIQDGMLEAVQFAHTKGCEIVIVSDANTVFIQSMLEHHNLTSII-KQVYTNPAVF-EGNVLHVSPFHASNLPPHGCPRCPPNMCKGSIVQQIQAS------KTYSKIIYIGDGGGDFCPCATQLSSNDVVFARE------QYELLRRLQANSG-DVSATVEPWSTGLDILAGFQRHIV 232 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9792.31564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9792.31564.1 >prot_Ecto-sp8_S_contig9792.31564.1 ID=prot_Ecto-sp8_S_contig9792.31564.1|Name=mRNA_Ecto-sp8_S_contig9792.31564.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=267bp MSNAPSAVRSGVLIVWDFDWSLVNENSDTWVIKQLGQELMPEFRRLREEEback to top mRNA from alignment at Ecto-sp8_S_contig9792:3403..7023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9792.31564.1 ID=mRNA_Ecto-sp8_S_contig9792.31564.1|Name=mRNA_Ecto-sp8_S_contig9792.31564.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3621bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9792:3403..7023- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9792:3403..7023- >mRNA_Ecto-sp8_S_contig9792.31564.1 ID=mRNA_Ecto-sp8_S_contig9792.31564.1|Name=mRNA_Ecto-sp8_S_contig9792.31564.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9792:3403..7023- (Ectocarpus species8 EcLAC_412)back to top |