mRNA_Ecto-sp8_S_contig9789.31561.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI) HSP 1 Score: 787 bits (2033), Expect = 1.980e-271 Identity = 522/543 (96.13%), Postives = 530/543 (97.61%), Query Frame = 1
Query: 895 GGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDREHEGRXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGAAPAVAXXXXXXXXXXXLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSLTAATNGSTPGVAAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGGSNSATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 2523
GGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDRE XXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGC+KEA + ++LLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHA+ESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATW+HFNDTITTKVSQ+TVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGAAPAV XXXXXXXXX LLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPS+ AATNGSTPG AAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTGGSNSATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE
Sbjct: 429 GGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGAAPAVXXXXXXXXXXS-LLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMNAATNGSTPGAAAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GTGGSNSATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 968
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE) HSP 1 Score: 767 bits (1981), Expect = 3.730e-260 Identity = 512/586 (87.37%), Postives = 518/586 (88.40%), Query Frame = 1
Query: 895 GGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDREHEGRXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGE--RSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWGPGTQAQSMRPGAAPAVAXXXXXXXXXXXLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSLTAATNGSTPGVAAAVGGTIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGGSNS-----------------------------------------ATKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 2523
GGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDR+HEGR XXXXXX APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGC+KEAGE ++LLHAPEILMLHVKRFRRGY WSHKVHNRVVFPLHDLDVSRWLSDHA+ESSVNQQRA GTSGGDAHRKSSVRR XXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSW PGTQAQSMRPGAAPAV XXXXXXXXX LLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPS+TAATNGSTPG AAAVG TIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTGGSNS A KEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE
Sbjct: 427 GGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDRDHEGRASXXXXXX--APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSVRRGCASPDGXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRPGAAPAVXXXXXXXXXXS-LLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMTAATNGSTPGAAAAVGATIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---GTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRAAKEMVAVPRGVHRSLVNRYGPRTPAVVAGKPSPLDATTGGVKVAVAPGESADRISVGRXXXXXXXMALVGSSRPLLELTSCTACAALEEERALLKSAEQKE 1006
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: L8H1Q6_ACACA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1Q6_ACACA) HSP 1 Score: 105 bits (263), Expect = 1.280e-19 Identity = 66/227 (29.07%), Postives = 99/227 (43.61%), Query Frame = 1
Query: 1057 GLVSSLGVWLGF--KSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRP 1731
GL S + WL ++V LEDCL AF + E L GA++Y C+ C ++ + + PE+L +H+KRFR + K+ + V FPL DLD+SR+ A V+ + YDLV +V H GG+ GHY +Y +D W+ F+D+ T VS++TV + Y+L Y R+ P
Sbjct: 344 GLFSKVTNWLMLSNRTVTLEDCLQAFCTKEELMGADRYRCEHCKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLDISRFCEQDADAPQVSMK----------------------------------------------------------YDLVSVVNHIGGISGGHYIAYALNDEDGKWYEFDDSWATAVSEDTVRNKEAYVLFYLRQSP 512
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: A0A5K3EM68_MESCO (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3EM68_MESCO) HSP 1 Score: 105 bits (262), Expect = 1.660e-19 Identity = 67/215 (31.16%), Postives = 96/215 (44.65%), Query Frame = 1
Query: 1099 VALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPV-LYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSS--ASPYILVYRRKRPS 1734
+ LEDCLDAFF + L G NQYHC+ C L PE+L LH+KRFR ++ + K+++ V FPL +LD+S++L PS V LYDLVG+V H+G + GHY +Y ++ G W+ FND+ +V + S +S YILVYR+++ S
Sbjct: 356 IELEDCLDAFFDVDELAGENQYHCEHCSRHTNGRMHIELTKLPEVLCLHLKRFRHDFISASKIYSPVDFPLRNLDLSKYLH-------------------------------------------------------------PSCRTRVALYDLVGVVCHSGTVRCGHYYAYAQNQGDNAWYEFNDSSVLRVDDSAIPSLSSSAYILVYRKQQTS 509
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: UPI000F67000D (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67000D) HSP 1 Score: 104 bits (259), Expect = 2.760e-19 Identity = 62/214 (28.97%), Postives = 92/214 (42.99%), Query Frame = 1
Query: 1081 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 1722
WL +V+L CL AFFS + L+G N Y C+ CG + + S ++H PE+L++H+KRFR Y++S K+ V FPLH LD++ +L V YDL ++ H G GHYTSY ++ + W+ F+D T+VS ETV+ Y L Y++
Sbjct: 242 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFLHKDCTSEVVT------------------------------------------------------------YDLYAVICHHGTAGGGHYTSYCQNWSNGRWYEFDDQYVTEVSPETVAKCEAYCLFYKK 395
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: UPI001E1D05EE (ubiquitin carboxyl-terminal hydrolase 33-like isoform X1 n=3 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D05EE) HSP 1 Score: 104 bits (259), Expect = 4.090e-19 Identity = 63/217 (29.03%), Postives = 95/217 (43.78%), Query Frame = 1
Query: 1081 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRP 1731
WL +V+L CL AFFS + L+G N Y C+ CG + + S +L PE+L++H+KRFR ++S K+ V FPLH LD++++L S V YDL G++ H G GHYT+Y ++ + W+ F+D T+VS ETV+ Y+L Y++ P
Sbjct: 511 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVLQLPEVLIVHLKRFRHETMFSSKISQYVSFPLHGLDLTQFLHKDC------------------------------------------------------------SSEVVTYDLYGIICHHGTAGGGHYTAYCQNWSNHRWYEFDDQYVTEVSSETVAKCEAYVLFYKKASP 667
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: UPI001C70FF2F (ubiquitin carboxyl-terminal hydrolase 20-like isoform X1 n=15 Tax=Penaeus TaxID=133894 RepID=UPI001C70FF2F) HSP 1 Score: 104 bits (259), Expect = 4.270e-19 Identity = 62/214 (28.97%), Postives = 92/214 (42.99%), Query Frame = 1
Query: 1081 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 1722
WL +V+L CL AFFS + L+G N Y C+ CG + + S ++H PE+L++H+KRFR Y++S K+ V FPLH LD++ +L V YDL ++ H G GHYTSY ++ + W+ F+D T+VS ETV+ Y L Y++
Sbjct: 531 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFLHKDCTSEVVT------------------------------------------------------------YDLYAVICHHGTAGGGHYTSYCQNWSNGRWYEFDDQYVTEVSPETVAKCEAYCLFYKK 684
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: A0A1I8AR30_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AR30_9BILA) HSP 1 Score: 103 bits (258), Expect = 4.890e-19 Identity = 59/211 (27.96%), Postives = 93/211 (44.08%), Query Frame = 1
Query: 1096 SVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGG-LEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRK 1725
+++L+DCL AFFSP+ L+G + Y C+ C + + + PEIL +H+KRFR Y++S KV V FP+ D+D+S +L D+ PS P YDL V H GG E+GHY +Y R++ W+ F+D+ T++ V + Y+L Y+++
Sbjct: 441 AISLDDCLKAFFSPDHLKGEDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYMYSTKVSTSVTFPICDMDLSEFLCDNV---------------------------------------------------------QPSDMVPTEYDLCAFVTHRGGGSEYGHYLAYCRNELDDNWYEFDDSTVTRIDAAEVLNKQAYVLFYQKQ 594
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: A0A444TGK4_ARMVU (Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TGK4_ARMVU) HSP 1 Score: 103 bits (256), Expect = 9.710e-19 Identity = 63/217 (29.03%), Postives = 97/217 (44.70%), Query Frame = 1
Query: 1081 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRP 1731
WL SV+L +CL AFFS + L+G N Y C+ CG + + S ++ PEIL++H+KRFR Y++S K+ V FP+ LD+S +L S VR YDL ++ H G + GHYT+Y ++ + W+ F+D T+V+ ETV++ Y+L Y++ P
Sbjct: 525 WLWGPSVSLFNCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVIELPEILIIHLKRFRHEYMYSSKISQYVAFPVQGLDLSPFLHKDCT--------------------SEVRS----------------------------------------YDLYAVICHHGAVGSGHYTAYAQNASNNRWYEFDDQCVTEVNLETVANCEAYVLFYKKVSP 681
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Match: A0A1V9XU25_9ACAR (Ubiquitinyl hydrolase 1 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XU25_9ACAR) HSP 1 Score: 102 bits (255), Expect = 1.460e-18 Identity = 63/209 (30.14%), Postives = 90/209 (43.06%), Query Frame = 1
Query: 1096 SVALEDCLDAFFSPERLRGANQYHCDGCGCEKEAGERSNLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHAVESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRR 1722
SV+L DCL AFFS + L+G N Y C C + + S LL PE+L +H+KRFR L+S K+ +RV FPL LD++ + HA + LYDLV ++ H G GHYTSY +++ W+ F+DT +KV V++ Y+L YR+
Sbjct: 582 SVSLTDCLAAFFSADELKGDNMYSCGKCNKLRNGIKYSKLLELPEVLCIHLKRFRHELLFSTKISSRVSFPLEGLDMAPFTHPHARDEVT------------------------------------------------------------LYDLVAVICHHGTASSGHYTSYAKNEYDEQWYEFDDTYVSKVDPSVVATCEAYVLFYRK 730 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9789.31561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9789.31561.1 >prot_Ecto-sp8_S_contig9789.31561.1 ID=prot_Ecto-sp8_S_contig9789.31561.1|Name=mRNA_Ecto-sp8_S_contig9789.31561.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=841bp DTGGGYPRSRQGKPLVRRQRAARRARGAAVDLGPAARRAQTSGAGELRARback to top mRNA from alignment at Ecto-sp8_S_contig9789:5..5715+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9789.31561.1 ID=mRNA_Ecto-sp8_S_contig9789.31561.1|Name=mRNA_Ecto-sp8_S_contig9789.31561.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5711bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9789:5..5715+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9789:5..5715+ >mRNA_Ecto-sp8_S_contig9789.31561.1 ID=mRNA_Ecto-sp8_S_contig9789.31561.1|Name=mRNA_Ecto-sp8_S_contig9789.31561.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2523bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9789:5..5715+ (Ectocarpus species8 EcLAC_412)back to top |