mRNA_Ecto-sp8_S_contig97888.31559.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: D7FPR0_ECTSI (Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR0_ECTSI) HSP 1 Score: 149 bits (376), Expect = 6.380e-43 Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 1
Query: 16 YMLDAQTIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
YMLDA+TIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLK+RGNVPVAQVSWVDADAYCSWAGRR
Sbjct: 66 YMLDAETIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKSRGNVPVAQVSWVDADAYCSWAGRR 133
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A8J5XF83_DIALT (FGE-sulfatase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF83_DIALT) HSP 1 Score: 90.1 bits (222), Expect = 1.400e-19 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 19 MLDAQTIK--EADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
LDA+T+ +AD G+GR++ + HWVGV GA WRQPEGPRSS++ R + PV S+ DA A+C+WAGRR
Sbjct: 125 FLDAETLARADADGGLGRLRDAPHWVGVAGAYWRQPEGPRSSIRGREDHPVVHASYNDALAFCTWAGRR 193
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A7S2WSR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSR2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.610e-18 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 16 YMLDAQTIKEAD--EGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
Y+ T+ D G GRVK + HW+ V+GA WR+PEGP SSL+ R + PV VS+ DA AYC WAGRR
Sbjct: 156 YLASKDTVDAVDGESGYGRVKDAPHWMAVQGAYWRRPEGPGSSLRGRASHPVTHVSYNDAKAYCEWAGRR 225
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A7S2SNU0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 7.410e-18 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 16 YMLDAQTIKEAD--EGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
Y+ T+ D G GRVK + HW+ V+GA WR+PEGP SSL+ R + PV VS+ DA AYC WAGRR
Sbjct: 156 YLASKDTVDAVDGESGYGRVKDAPHWMAVQGAYWRRPEGPGSSLRGRASHPVTHVSYNDAKAYCEWAGRR 225
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A6J4KCL4_9ACTN (Sulfatase modifying factor 1 (C-alpha-formyglycine- generating enzyme 1) n=1 Tax=uncultured Friedmanniella sp. TaxID=335381 RepID=A0A6J4KCL4_9ACTN) HSP 1 Score: 79.7 bits (195), Expect = 3.070e-16 Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 43 EADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
E + +GR G+ W+GV GA+WR P+GPRS L R + PV VSW DA AYC WAGRR
Sbjct: 73 EPADVLGRAPGTPWWLGVRGADWRHPDGPRSDLSGRRDHPVVHVSWNDAQAYCVWAGRR 131
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A511MCN8_9NOCA (FGE-sulfatase domain-containing protein n=2 Tax=Nocardia TaxID=1817 RepID=A0A511MCN8_9NOCA) HSP 1 Score: 79.3 bits (194), Expect = 6.180e-16 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 37 IKEADEG--IGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
+ ADE +GR S WVGV+GA+WR PEG SS+ +R + PV QVSW DA AYC WAGRR
Sbjct: 81 VLAADEHDLVGRAPQSPWWVGVKGASWRHPEGRHSSIDDRADHPVVQVSWHDATAYCDWAGRR 143
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A6H9WUK6_9MICO (Formylglycine-generating enzyme family protein n=3 Tax=Pseudoclavibacter endophyticus TaxID=1778590 RepID=A0A6H9WUK6_9MICO) HSP 1 Score: 78.6 bits (192), Expect = 8.350e-16 Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 37 IKEADEGI-GRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
++ DE + G+V G+ W+GV GA+WR+P GPRS L G PV VSW DA AYC+WAGRR
Sbjct: 70 VQADDEDVMGKVPGTPWWLGVRGADWRRPGGPRSDLDELGEHPVVHVSWNDAVAYCAWAGRR 131
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: UPI0016687081 (Uncharacterized protein n=2 Tax=Nonomuraea cavernae TaxID=2045107 RepID=UPI0016687081) HSP 1 Score: 79.0 bits (193), Expect = 8.420e-16 Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 16 YMLDAQTI-------KEADEGI--GRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
Y+ +A+ I + A G+ RV G+ WVGVEGA WR PEGP SS+ +R N PV VSW DA AY SWAG+R
Sbjct: 94 YVTEAERIGWSFVFRRFAGRGVMDARVPGAPWWVGVEGATWRSPEGPGSSVGDRQNHPVVHVSWHDAHAYASWAGKR 170
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A2D7F2A1_9BACT (Serine/threonine protein phosphatase n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A2D7F2A1_9BACT) HSP 1 Score: 79.0 bits (193), Expect = 1.010e-15 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 19 MLDAQTIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
L T+++ ++ +V+G E WVG++GANWR+PEGP S++KNR + PV VSW DA AY WA +R
Sbjct: 114 QLKKSTVRKLNQSR-KVQGVEWWVGIDGANWRKPEGPGSNIKNRMHHPVVSVSWHDAHAYAQWANKR 179
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Match: A0A7Y0QFG9_CELFI (Formylglycine-generating enzyme family protein n=2 Tax=Cellulomonas fimi TaxID=1708 RepID=A0A7Y0QFG9_CELFI) HSP 1 Score: 78.2 bits (191), Expect = 1.830e-15 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 43 EADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAQVSWVDADAYCSWAGRR 219
+ D+ +GR + W+ V GA+WR PEG RSSL+ R + PV VSW DA AYC+WAGRR
Sbjct: 117 DPDDVLGRAASTPWWLAVRGADWRHPEGRRSSLEGRDDHPVVHVSWNDAQAYCAWAGRR 175 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97888.31559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig97888.31559.1 >prot_Ecto-sp8_S_contig97888.31559.1 ID=prot_Ecto-sp8_S_contig97888.31559.1|Name=mRNA_Ecto-sp8_S_contig97888.31559.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=68bp MLDAQTIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKNRGNVPVAback to top mRNA from alignment at Ecto-sp8_S_contig97888:210..431- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig97888.31559.1 ID=mRNA_Ecto-sp8_S_contig97888.31559.1|Name=mRNA_Ecto-sp8_S_contig97888.31559.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=222bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97888:210..431- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig97888:210..431- >mRNA_Ecto-sp8_S_contig97888.31559.1 ID=mRNA_Ecto-sp8_S_contig97888.31559.1|Name=mRNA_Ecto-sp8_S_contig97888.31559.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=204bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97888:210..431- (Ectocarpus species8 EcLAC_412)back to top |