mRNA_Ecto-sp8_S_contig9788.31558.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9788.31558.1
Unique NamemRNA_Ecto-sp8_S_contig9788.31558.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE)

HSP 1 Score: 728 bits (1880), Expect = 5.690e-254
Identity = 387/421 (91.92%), Postives = 394/421 (93.59%), Query Frame = 1
Query:    1 MTLSAHRRYGVGIALWLMVLMIAMSLVSMESTDDTIMCPPTNQLVVLCMSVMSYDAQGNPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDVEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMYGADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKTIEAVRSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEFHMELTQKLEECAVALR 1263
            M LSAHRRYGVGIALWLMVLMIAMS VSMESTDDTIM                     +PFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLD EALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTL+SKVVYALSACLTN+GDVQLQFGS+MGEAVLSAMY ADGSDRRVR+KTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEK IEAV+SFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEE+H ELTQKLEECAVALR
Sbjct:    1 MRLSAHRRYGVGIALWLMVLMIAMSSVSMESTDDTIMW--------------------SPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.400e-31
Identity = 122/391 (31.20%), Postives = 169/391 (43.22%), Query Frame = 1
Query:  187 LSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDVEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGP----DSQPSV-----------------------------------------------------LALLLENAMAATTPTLKSKVVYALSACLTNSGDVQLQFGSQMG-----EAVLSAMYGADGSDRRVRMKTLTLMSDLLQEAAR--GSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAA---LEKTIEAVRSFTPSCRDQFAQLDTKRRLEGL 1158
            L      SI  +DDHP++D   AR  RML AL  +P  E++ M LD  A+ +   +ER   LQ LWE RQ EL+E Y  MP   ++L   I IL +  + D  L  AL DLED LSD+DMARDFHT+GG+  L ++L   R   VRE AAW +GTAVKN  E   W LE GP    D+  SV                                                     +  LLE    A    L+ K +YAL++ L ++   Q  F +  G      A  +A      + R +  K +TL+SD++ + A   GS    +A             WC  +   L  A +      LE+ ++A     P C  + A +  + RL  +
Sbjct:   91 LEKRTADSIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLD--AILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEAHEEGSGGGAVAAGVARDER-----WCVLLHALLLRADAARGGTQLERALDAALVLAPLCGARPAGVALEARLAAM 474          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 9.130e-26
Identity = 88/250 (35.20%), Postives = 128/250 (51.20%), Query Frame = 1
Query:  370 LQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLE----DGPDSQPSVLALLLENAMAATTPTLK--SKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMYGADGSDRRVRMKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGA----WCRRVDEALQHAHSPAALEKTIEAV 1089
            + G+W+ RQQ+LREA ++M     + +ERI +L+ AD+++  +   L  LED L DIDMARDFHT+GG+P L  +L  S  E VR  AA  VG  V+N PE Q WV E       D + + +  LL + M ++  T K  SK + ALS  L N  +    F    G A L A+   D  + R+ ++ + ++SDL  EAA      +   +        GG     WCRR ++    A      ++  EAV
Sbjct:  134 IDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAV 374          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.040e-16
Identity = 113/384 (29.43%), Postives = 158/384 (41.15%), Query Frame = 1
Query:  253 ARADRMLAALESIPEGERQGMDLDVEALRSKP-----LAERLAE-------------LQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRP-EGVREL---AAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPT---------LKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMYGAD------------GSDRRVRMKTLTLMSDLLQEAARGSPAAVLAT---------------MPVGSTASSGGAWCRRVDEALQHA------HSPAALEKTIEAVRSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEE 1212
            +R   ML  L  +P  ER  M +D   L S+P     L E + E             ++ LW  RQ  L +AY+ M K  E L   I +L      +  +  AL +LED LSD+DMA+DF+T+GG+P L S L      EG RE+   AAW VG AVKN+   Q WVLE G +   S L  LL       T           L  K VYA+++    +  VQ +   + G  VL  +  +             G  R + +K +    DL  EA +   AA+                  +  G T+    AWC  +   L+            ALE  +EA++     C  Q    +  R +E L ++ R       EV EEE
Sbjct:  174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEE--VMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSIXXXXXXXLLAGVTSP---AWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAR-------EVVEEE 544          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7S2RJU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.400e-14
Identity = 69/206 (33.50%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  370 LQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHT-IGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDS-----QPSVLAL-----LLENAMAATTPTLKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMY--GADGSDRRVRM--KTLTLMSDLLQE 942
            L+ LWE RQ+EL+ A +AM +  + L   I  + + D  + ++  AL DLE+ LSD+DMARD H  +GG+P L  +L   +   +R  AA  +GTA+KNEP  Q W+LE   +S     Q +  AL     +LE         +  + +YAL++ L ++   Q  F    G   L A+     DG      +  K   L+ D+L+E
Sbjct:  121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIRSGD--EESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7S0J9D3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J9D3_9EUKA)

HSP 1 Score: 87.4 bits (215), Expect = 2.610e-14
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  505 ALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMYGADGSDRRVRMKTLTLMSDLLQEAA 948
            AL  L++L+ D+D ARDF TIGGF  +  +L    PE V    AW VGTAV+N+ E QL +LE        ++A LL+     +   +++KV+YA+S  L N  + QL F  + G +VL      D S R +R K L L++DLL E+A
Sbjct:  171 ALFALQELVEDLDNARDFMTIGGFKQVMELLGSDTPELVAA-TAWVVGTAVQNQRELQLHMLEL------ELMAPLLQLLHDHSAIDVRAKVLYAVSGLLRNCPEAQLDFRRRQGVSVLVMTLARDSSPRLMR-KALVLLTDLLSESA 310          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7S1UMA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.640e-14
Identity = 69/220 (31.36%), Postives = 111/220 (50.45%), Query Frame = 1
Query:  355 ERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLED------------GPDSQPSVLALLLENAM---AATTPTLKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMY----GADGSDRRVRMKTLTLMSDLLQEAARGS 957
            +R+AE+   W  RQ +L+ A +++   + +    + +L +  A+   L   L  + + L D+D+A DFH++GG+P +A++L    PEGVR  AA  +  +V+N PE Q WV  D            G D    V AL L   M   +++TP  + K ++ALSA L N      +F    G A LSA+     GA   D ++  + + + +DL  EAA  +
Sbjct:  198 DRVAEV---WRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAAESA 414          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.770e-14
Identity = 58/133 (43.61%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  475 ADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLAL------LLENAMAATTPT----------LKSKVVYALSACLTNSGDVQ 825
            AD T       L  LE LL D+D ARDFHTIGG+PTL S L+ S+P  VR +AA AVGTA+KN  ++QLW LE    S     AL      LL  A+  +  T          L+ + +YALSA +  + DVQ
Sbjct:  204 ADLTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7S2FHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.130e-14
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  268 MLAALESIPEGERQGMDLDVEALRSKPLAERL--AELQGLWEVRQQELREAYDAMPKVNELLMERIDIL----NNADATDGALTGALTDLEDLLSDIDMARDFH-TIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLE 693
            M+  L ++P  E+  +       +SK   E    A+L+ LWEVRQ EL EA  A  +  + L   I  L    ++  A D  +  AL  LED LSD+DMARDFH  +GG+P+L ++L  ++   VR  AA  +GTAVKN+ E Q W+LE
Sbjct:   52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILE 200          
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Match: A0A7S0LLH1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLH1_9EUKA)

HSP 1 Score: 83.2 bits (204), Expect = 6.290e-13
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  505 ALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMYGADGSDRRVRMKTLTLMSDLLQEAA 948
            AL  L++L+ D+D A+DF  IGGF  +  +L    P  V  +A W VGTAV+N+ E QL +LE        ++A LL+   A T   +++K +YALS  L N  + QLQF    G  VL     AD S  R+  K L L++DLL E A
Sbjct:  173 ALLALQELVEDLDNAKDFMAIGGFKQVMELLGSETPALVAGVA-WIVGTAVQNQRELQLQMLEL------HLMAPLLQLLHAHTAAEVRTKALYALSGLLRNCAEAQLQFKQGEGVGVLLRTL-ADVSSPRLVRKALVLLTDLLAERA 312          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9788.31558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQD1_9PHAE5.690e-25491.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7K3_9STRA2.400e-3131.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U9J5_9STRA9.130e-2635.20Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TQS8_9STRA3.040e-1629.43Armadillo-like helical n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S2RJU1_9STRA2.400e-1433.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0J9D3_9EUKA2.610e-1440.54Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1UMA0_9STRA2.640e-1431.36Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3M316_9STRA4.770e-1443.61Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2FHY2_9STRA7.130e-1440.27Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S0LLH1_9EUKA6.290e-1340.54Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9788contigEcto-sp8_S_contig9788:2317..6964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score706.8
Seed ortholog evalue5.9e-201
Seed eggNOG ortholog2880.D7FW70
Model size3176
KEGG koko:K14001,ko:K15196
KEGG Pathwayko04141,map04141
Hectar predicted targeting categorysignal peptide
Exons3
EggNOG free text desc.adenyl-nucleotide exchange factor activity
EggNOG OGsCOG0197@1,KOG2160@2759
Cds size1266
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145345.1150656-CDS-Ecto-sp8_S_contig9788:2316..24271681145345.1150656-CDS-Ecto-sp8_S_contig9788:2316..2427Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9788 2317..2427 +
1681145345.127075-CDS-Ecto-sp8_S_contig9788:2654..32361681145345.127075-CDS-Ecto-sp8_S_contig9788:2654..3236Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9788 2655..3236 +
1681145345.1377103-CDS-Ecto-sp8_S_contig9788:4481..50541681145345.1377103-CDS-Ecto-sp8_S_contig9788:4481..5054Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9788 4482..5054 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145345.1487966-UTR-Ecto-sp8_S_contig9788:5054..69641681145345.1487966-UTR-Ecto-sp8_S_contig9788:5054..6964Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9788 5055..6964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9788.31558.1prot_Ecto-sp8_S_contig9788.31558.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9788 2317..5054 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9788.31558.1

>prot_Ecto-sp8_S_contig9788.31558.1 ID=prot_Ecto-sp8_S_contig9788.31558.1|Name=mRNA_Ecto-sp8_S_contig9788.31558.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=422bp
MTLSAHRRYGVGIALWLMVLMIAMSLVSMESTDDTIMCPPTNQLVVLCMS
VMSYDAQGNPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEG
ERQGMDLDVEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLM
ERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLR
CSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMA
ATTPTLKSKVVYALSACLTNSGDVQLQFGSQMGEAVLSAMYGADGSDRRV
RMKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHA
HSPAALEKTIEAVRSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEV
AEEEFHMELTQKLEECAVALR*
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mRNA from alignment at Ecto-sp8_S_contig9788:2317..6964+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9788.31558.1 ID=mRNA_Ecto-sp8_S_contig9788.31558.1|Name=mRNA_Ecto-sp8_S_contig9788.31558.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4648bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9788:2317..6964+ (Ectocarpus species8 EcLAC_412)
ATGACACTTTCAGCCCACCGAAGATATGGAGTTGGCATCGCTCTGTGGTT GATGGTGCTGATGATTGCCATGAGCTTAGTCTCGATGGAAAGCACTGATG ATACGATCATGGTGAGAAGGCGGAGGAAAGAAAGAGTGGAGACTAACATC AACACAGGGGCGGGGTATGCCACAACCATCGCTAAGTCAACTGCATCATT TCGGTCACCTTCTGTTGTCAGCAACGGACCGCAGTCCCGATTGGCGTCCA ATACACTGCTGCAGCAGCCGTTTGTAGAAATATTCTCTGTATTTACGTGC CTGGTGGGTCCTTGTCTGTCGCTTCTTAGGGCGCCAAGTGTCCGCCGACA AACCAACTCGTCGTCCTTTGCATGTCCGTCATGTCTTACGATGCACAGGG GAATCCTTTCGACCTCAGCACGGAGGCCTTGGCGTCTATCGCCGATCTAG ATGACCATCCCATCGAAGACAACGATGCTGCTCGAGCTGACCGCATGCTC GCGGCCCTGGAGTCCATCCCTGAGGGCGAGCGCCAAGGCATGGACCTAGA CGTGGAAGCTTTGCGCTCGAAACCCCTTGCGGAGCGGTTGGCCGAGTTAC AGGGGCTATGGGAAGTACGGCAGCAGGAACTCCGCGAGGCTTACGACGCG ATGCCTAAGGTGAACGAATTACTGATGGAACGGATCGATATCCTGAACAA CGCCGACGCAACGGATGGCGCCCTGACCGGCGCTCTCACCGACCTGGAGG ACCTGCTGTCGGATATCGACATGGCTAGAGATTTCCATACTATCGGAGGA TTCCCCACGCTGGCTTCTATGCTCCGCTGTTCGCGACCAGAAGGTGTTCG TGAACTAGCAGCCTGGGCAGTCGGCACTGCGGTGAAAAATGAGCCTGAAC ATCAACTGTGGGTGTTAGAGGTGAGCACACCAAGAGCAGCCATCGGAGTA TGAGGTTGCCAAGTAGCGGCACGAAGGAGTCGCCCCTCGTGTTGGAATGA AACAGTCCTCCACTTTGGAGCGGAAGAGGGGCGATACCGTTGGTAGAAGC GCAGTTCGGAGCATTTTATGTATTCAGGAGATCAATACGATGACACATTC CGTACTGAGTCTTGGCAGCGTCCACTATCGCGGCAGATCTCGCACCAGTG GCAATTCCTCTCCGACGATTCCGACATTGTACAAGGTTGTACGCACACGG TTTCCACGGCGGTTCTGTCTTAATACGTGAGGATCCTGACACGATGGCTG CCCTCTTCTGTCGTTTAGTACCATAGTTGGGGCTGGCTGGTGAGAAGAAT CTCAGTCACTGCCGCTCGTTCATCTTCGAATGTCCTCCACAAAATGAGAA ATTTTCAAATTCGTCAAGAAAGTTCAATCAAGGTAGACAACACACACACT TTTCACCTGCCGCCCTTTGGGTTGGTTGTATGCATATGTACGTGGTGTGC CCGGGTCTAAAACTACTGCACTTCGGAACATGATTGATTGCGAGAAGGGG ACAGTTCTTTGCGGTGCCAATGCCTTGCAATTGTGAAGCTCTACCTTTCA TGTCCATCGCGGTCGATCTTCTGAATGAACGCGTTCAACACCAAACCAAG ATTTAATGACACATTGCAGCGAGAGGCAACGGACGAAATTCAACGTATCA AGTTCCTAGTGATTCCGCGTGTTTCGGTTGACGTGGAAGCAAGTCACAAC ATGACGTGCACAGATGCTATGATGGGTCATCTGGAGAAACAGACGGACGG ATCCATCCAAAAATAGCCGCCCGATTTCGTTTTGGAGCAGATTCGAATGG GCGCAGTGTGGCCGGGAGTCGCGCGCTGCACAAATACGTTAAATACCCTT CCCTCGAATCCCTAACAAGACACATCGCTTTGCTTTCGTTGTCCTTGTCT TTCAAGTGACAAGCCGTCTCGACCTCTTGTATTACCGCCTTGTGGTCACA CGCTACATGTACCCCACGATAGCACAGAAACAAATGTGAAGACCCAGATA AAATCCTAACCACTCCCGAATCTGACAAAAAATATGCTAAATACAGGATC GATGTGTGTGTGACGTGTGAGAGAGCCAACACATATTCCTCGGCCTGCCA TCTTGTCTGCGTACGCTGCTTGTCTGCGTACGCTGCTTCTGCGTACGCTG CTGCATAACAAACAGGACGGTCCTGATTCCCAACCCTCGGTGCTGGCTCT TCTGCTGGAAAACGCCATGGCCGCCACGACCCCGACTCTGAAAAGCAAAG TTGTCTATGCACTTTCAGCGTGCTTGACAAATAGTGGTGATGTACAGCTT CAGTTCGGCTCGCAAATGGGAGAGGCCGTGCTTTCAGCGATGTACGGTGC AGATGGATCAGATCGCCGTGTTAGAATGAAGACCCTCACCCTCATGTCAG ATTTGCTTCAAGAGGCTGCGAGAGGCTCGCCGGCAGCTGTTCTAGCCACG ATGCCTGTTGGCTCCACGGCTTCGTCGGGCGGGGCCTGGTGTCGCCGAGT AGATGAAGCGCTGCAGCATGCGCATTCTCCAGCTGCGCTGGAAAAGACGA TCGAAGCTGTTCGGTCTTTTACACCCTCTTGCAGGGATCAATTTGCACAG CTCGACACTAAACGACGATTAGAAGGCCTAGCCCAGCAATGCCGTACATC GCCTCCGGAGGGGTTCGAGGTAGCAGAGGAAGAATTTCACATGGAATTGA CCCAGAAATTGGAAGAATGTGCTGTCGCTCTTCGATGACCCCGAGCAGAG TAGTGTGGCATGTAGCGGCATTTTCTCGACGAGCTTGTAGGCTATATGAG CGACTCCCACTTTCGCAGGAGTTTGAGGTGTTTGCTTGGACGAAATCACT GTTCTTGGTTCAGTCTACACGCTGCAGCCGCGAGGATAGATAAAGCGCAT TTCTCGGGCCTTCGCCATGAACCGTGTGTGACGCTTGCGTGTTGACGTGA TGCCCTAAGCATATGCCCGGACCCAATACCCCCGCGCACGGGGGGAACGC AGGCAGAGAGATGTTGGTACATGGTTTGACATAAGAGTACACAGCAGTTG GACGTGGCGTCGTGGATAATAGATTACGTTCTATTGATGGCCGCAATGCG AGGCTTGTACATAGGAAAATGAATGCAAAATATGCATACATGAATTTTTT ACATGCAGCTGAAGGTATTTTCAGCACGAGGCTCAACCCGGCGGCCCCTC TCTTCGGGTGATCGGAGGTACCAGACCAAGTCGCTAGAGATGTGTACCCC ATGCAACCGAATGAGACAGACCACTCGAGCCTACATGTACATGCATCAAA CGAACACGACATGAGCATGTACAAAGGGGCACCTAAAAGAACCCCGGGGT TCGGTACTAACCAGTGCCTCGTGTGTATGTGAGTTCAAGACCCTACGCCG AACTTCTGCGATCTCAGTACATCCAGAGTGGAACCATCCCCGAAGTACTA GACAATAGGTACAAATACCACGAAGGAAGGGTCAAAAAACCCTTCGGGAA TACAACGCAACAATAAATACCTGGTGAACGATGCCGAGGTGCGGGTTCGG GTGTTCTTTTTTTGTGAACACAACCTTCTTCTGCGACATGCTCACCTACC CGATTTTTCTGTTGAGTTCTGTGACACTAGCAGAACCCTACCCGGAATTA AAAACCCTGCAGACCACACTTGGAACAGTCGGCTTTTTATGTAGCATACC TGGGTCTATTCCAAAGGAAAGCAGCGTAGAGTATATATATGCATACGTGA TTTTGACACAAAACACTATCTCATATCGCACCCACCCAAAACACGGGTAG GGTAAAACCCTTCAGGGTGACGGCACTGCTACTTCCCTCAAAGAGGTGAC GGTGAGGAGGCGCTGTCACTGCCAGACTAAAAAAGATACGCATGTTTTAC TCGGCAACGCGGTGAGGCCTCATCCAAGACAAAATCCATCCGCTCACTCC TCTTTTTGCGGCTGCCGTAAGGGCGTTACCATGCTCTTCGCGCGGGGCAC ATGAGGAGCTGCAATCAAGGAACAAAAATAAATAGAGATCGAAGCAACTT CGCACTGCCGAAAAACTACCGACTTTTACGTGAAGTATGTTGTCTTTGTC TTGTCTTGTCAACACCAAATACTGCGTAGGGCGCACGCAAGACATTAGTA AATCAAACGAGACATCGCAAGCACGTCAGCAGTTCAGAAGCAAAACGCAC CAGGTCAGCAAACAACCATTTCGGGGTAGCGAAATTGCACCAAGGTGCGC GATCGCGCGCAATACCGCCGCCCCTTCGCTGCAGATCCAGTCCCGTCTGA GACTCGATCGGACGAGTCGGGCGGCGGCCACGCCTTTTTCGTCGTAGATC ACAGCTCTGGCCGACAAACCCCTTTCAAACCTACTCACACCCAAAAGAAC ACAAACACCAAACTCGTTCTACTTTGAAACTTCATGCCACACTCTACCAT CGATCGTGTACAACTACTACAACAGAACACCTTTGTTCTTTGGTTCAACA GCAACCGAACACGATCTGGCACAACGCAACATCGCCAGTAAAAACCTCAG CAGTTCTGGCTTAGACCCAACCTCGGGGCTCATCTTGAGAAAAAACTTGC GCCACGTAGCAACAACCGCATTTATAGCTTACTCTTCCCCATCGTACA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9788:2317..6964+

>mRNA_Ecto-sp8_S_contig9788.31558.1 ID=mRNA_Ecto-sp8_S_contig9788.31558.1|Name=mRNA_Ecto-sp8_S_contig9788.31558.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9788:2317..6964+ (Ectocarpus species8 EcLAC_412)
ATGACACTTTCAGCCCACCGAAGATATGGAGTTGGCATCGCTCTGTGGTT
GATGGTGCTGATGATTGCCATGAGCTTAGTCTCGATGGAAAGCACTGATG
ATACGATCATGTGTCCGCCGACAAACCAACTCGTCGTCCTTTGCATGTCC
GTCATGTCTTACGATGCACAGGGGAATCCTTTCGACCTCAGCACGGAGGC
CTTGGCGTCTATCGCCGATCTAGATGACCATCCCATCGAAGACAACGATG
CTGCTCGAGCTGACCGCATGCTCGCGGCCCTGGAGTCCATCCCTGAGGGC
GAGCGCCAAGGCATGGACCTAGACGTGGAAGCTTTGCGCTCGAAACCCCT
TGCGGAGCGGTTGGCCGAGTTACAGGGGCTATGGGAAGTACGGCAGCAGG
AACTCCGCGAGGCTTACGACGCGATGCCTAAGGTGAACGAATTACTGATG
GAACGGATCGATATCCTGAACAACGCCGACGCAACGGATGGCGCCCTGAC
CGGCGCTCTCACCGACCTGGAGGACCTGCTGTCGGATATCGACATGGCTA
GAGATTTCCATACTATCGGAGGATTCCCCACGCTGGCTTCTATGCTCCGC
TGTTCGCGACCAGAAGGTGTTCGTGAACTAGCAGCCTGGGCAGTCGGCAC
TGCGGTGAAAAATGAGCCTGAACATCAACTGTGGGTGTTAGAGGACGGTC
CTGATTCCCAACCCTCGGTGCTGGCTCTTCTGCTGGAAAACGCCATGGCC
GCCACGACCCCGACTCTGAAAAGCAAAGTTGTCTATGCACTTTCAGCGTG
CTTGACAAATAGTGGTGATGTACAGCTTCAGTTCGGCTCGCAAATGGGAG
AGGCCGTGCTTTCAGCGATGTACGGTGCAGATGGATCAGATCGCCGTGTT
AGAATGAAGACCCTCACCCTCATGTCAGATTTGCTTCAAGAGGCTGCGAG
AGGCTCGCCGGCAGCTGTTCTAGCCACGATGCCTGTTGGCTCCACGGCTT
CGTCGGGCGGGGCCTGGTGTCGCCGAGTAGATGAAGCGCTGCAGCATGCG
CATTCTCCAGCTGCGCTGGAAAAGACGATCGAAGCTGTTCGGTCTTTTAC
ACCCTCTTGCAGGGATCAATTTGCACAGCTCGACACTAAACGACGATTAG
AAGGCCTAGCCCAGCAATGCCGTACATCGCCTCCGGAGGGGTTCGAGGTA
GCAGAGGAAGAATTTCACATGGAATTGACCCAGAAATTGGAAGAATGTGC
TGTCGCTCTTCGATGA
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