mRNA_Ecto-sp8_S_contig97477.31491.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI) HSP 1 Score: 176 bits (445), Expect = 3.080e-49 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1
Query: 1 LIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
LIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGF+TK
Sbjct: 279 LIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTK 365
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.600e-41 Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 1
Query: 1 LIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
LIAMVEEVV AQ+MTEAERVCLFFVDDA +LWVA SV F+D KIKIGEGLCGHAAATGGTVNVIDSYEDPRF GRWDKQTGF+TK
Sbjct: 289 LIAMVEEVVDAAQVMTEAERVCLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGGTVNVIDSYEDPRFVGRWDKQTGFVTK 375
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.390e-35 Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 1
Query: 1 LIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
LIAMVEEVV AQ+MTEAERV LFFVDDA +LWVA SV F+D KIKIGEGLCGHAAATG TVNVIDS +DPR GRWDKQTGF+ K
Sbjct: 274 LIAMVEEVVHAAQVMTEAERVRLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGRTVNVIDSCKDPRSVGRWDKQTGFVAK 360
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A7V3XCS9_9BACT (GAF domain-containing sensor histidine kinase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3XCS9_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 1.790e-13 Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 49 EAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
EAER LF D+ ELW +A+ + + ++K+GEG+ G TG T+N+ID+Y+DPRF+ +D++TG+ TK
Sbjct: 36 EAERSTLFLYDEERKELWSKIAQESEIKEIRLKLGEGIAGSVMKTGQTLNIIDAYQDPRFNNAFDEKTGYFTK 108
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A0S4N9J5_9BACT (Signal transduction histidine kinase n=1 Tax=Candidatus Thermokryptus mobilis TaxID=1643428 RepID=A0A0S4N9J5_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 1.410e-11 Identity = 29/82 (35.37%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 22 VVRVAQIMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
++ +A +T A+R ++ VD+ + E+W V + + + ++KIG+G+ G+ A TG +N++D+Y+DPRF+ D++TG+ TK
Sbjct: 180 ILEIALEITNADRGTVYLVDEMSGEIWSKVLQGDEIREIRLKIGQGIAGYVAQTGEVINLVDAYQDPRFNPEIDRKTGYRTK 261
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A0P1MNV1_9BACT (Signal transduction histidine kinase n=1 Tax=Candidatus Chrysopegis kryptomonas TaxID=1633643 RepID=A0A0P1MNV1_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 3.580e-11 Identity = 29/82 (35.37%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 22 VVRVAQIMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
++ +A +T A+R ++ VD+ E+W V + + + ++ +G+G+ G+ A TG T+N+ID+Y+DPRF+ D++TG+ TK
Sbjct: 180 ILEIALEITNADRGTVYLVDELTGEIWSKVLQGDELTEIRLPLGKGIAGYVAQTGETINLIDAYQDPRFNPEVDRKTGYRTK 261
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A6L9J1I7_9CHLR (SpoIIE family protein phosphatase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L9J1I7_9CHLR) HSP 1 Score: 66.6 bits (161), Expect = 6.510e-11 Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 52 AERVCLFFVDDAADELWVAKSVD----FDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
AER L+ VD+ A+ELW +D + +++IGEG+ GH AA+G VN+ D Y DPRF+ +D+ +GF T+
Sbjct: 61 AERGTLYLVDEQANELWSRVLMDQEGHLSEIRMRIGEGIAGHVAASGEVVNIPDVYADPRFNQDFDRTSGFRTR 134
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A2E9QGU6_9SPIO (Guanylate cyclase domain-containing protein n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A2E9QGU6_9SPIO) HSP 1 Score: 66.6 bits (161), Expect = 6.760e-11 Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 52 AERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
A+R LF +D +ELW + ++ +IK+ EG+ GH A TG TVN+ D+Y+D RF +D +TG+ T+
Sbjct: 74 ADRSTLFLIDREKEELWSTVAQGSEEIRIKLSEGISGHVATTGETVNIEDAYQDARFSRDYDLKTGYRTR 143
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A2P6MX58_9EUKA (Phosphodiesterase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MX58_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 1.300e-10 Identity = 33/86 (38.37%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 10 MVEEVVRVAQIMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
+++ ++R A+ + AER LF +D+ +EL VA+ D ++ ++ + G+ GH AATG T+N+I++Y+DPRF+ DK+TG+ T+
Sbjct: 560 LIQFIMRRARELVNAERCSLFLMDEDHNELRSKVAEGTD-EEIRVPMNMGIAGHVAATGSTLNIIEAYDDPRFNIEVDKRTGYKTR 644
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Match: A0A3N5T1K1_9CHLR (GAF domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5T1K1_9CHLR) HSP 1 Score: 65.1 bits (157), Expect = 2.340e-10 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 52 AERVCLFFVDDAADELWVAKSVD----FDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFITK 261
AER ++ +D+ ELW ++ + ++K+GEG+ GH AATG VN+ D+Y D RF+ ++DK TGF T+
Sbjct: 189 AERGTIYLLDEERGELWSKVLLEQIGPLSEIRVKVGEGISGHVAATGDVVNIPDAYADTRFNPQFDKVTGFRTR 262 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97477.31491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig97477.31491.1 >prot_Ecto-sp8_S_contig97477.31491.1 ID=prot_Ecto-sp8_S_contig97477.31491.1|Name=mRNA_Ecto-sp8_S_contig97477.31491.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=84bp MVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCback to top mRNA from alignment at Ecto-sp8_S_contig97477:14..274- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig97477.31491.1 ID=mRNA_Ecto-sp8_S_contig97477.31491.1|Name=mRNA_Ecto-sp8_S_contig97477.31491.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=261bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97477:14..274- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig97477:14..274- >mRNA_Ecto-sp8_S_contig97477.31491.1 ID=mRNA_Ecto-sp8_S_contig97477.31491.1|Name=mRNA_Ecto-sp8_S_contig97477.31491.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=252bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97477:14..274- (Ectocarpus species8 EcLAC_412)back to top |