mRNA_Ecto-sp8_S_contig97451.31486.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: D7FVJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ1_ECTSI) HSP 1 Score: 125 bits (315), Expect = 5.600e-36 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAEEDLGLLDTV 192
GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAEEDLGLLDTV
Sbjct: 41 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAEEDLGLLDTV 104
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A6H5K396_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K396_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.270e-31 Identity = 62/64 (96.88%), Postives = 62/64 (96.88%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAEEDLGLLDTV 192
GCTEEAKARDLTSKLGVQVHRSMV LSHSPMRALA EYSGKRVMVLGSSAKKIAEEDLGLLDTV
Sbjct: 72 GCTEEAKARDLTSKLGVQVHRSMVALSHSPMRALASEYSGKRVMVLGSSAKKIAEEDLGLLDTV 135
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A0L0H9B8_SPIPD (TIGR01456 family HAD hydrolase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H9B8_SPIPD) HSP 1 Score: 62.8 bits (151), Expect = 5.570e-10 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAEEDLGLLDTV 192
G +E +KA LT KLG+++H S +VLSHSPMR LAP+Y K V V+G K + G D V
Sbjct: 74 GESEASKAHKLTQKLGIEIHPSQIVLSHSPMRHLAPQYKNKLVHVVGPDECKNVAQSYGFSDVV 137
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A1Y1WLK1_9FUNG (HAD hydrolase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WLK1_9FUNG) HSP 1 Score: 59.3 bits (142), Expect = 9.830e-9 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAE 165
G TE AKA D++ +LGV++ V+LSHSPM+ALA +YS K V+V+G + AE
Sbjct: 87 GVTEAAKAADISRRLGVEIKPEQVILSHSPMQALAEKYSDKHVLVVGGVQHRCAE 141
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A1Y1YVF2_9FUNG (HAD-superfamily hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YVF2_9FUNG) HSP 1 Score: 54.7 bits (130), Expect = 4.260e-7 Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKKIAEEDLG 177
G TEEAKA DL SK+G +V + ++LSHSP++A + Y + V+V+G A K G
Sbjct: 78 GLTEEAKAADLASKIGFEVTKEQIILSHSPLKAWSRRYEEEPVLVIGRDACKEVAHSYG 136
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A088S1E6_9TRYP (Uncharacterized protein n=4 Tax=Viannia TaxID=37616 RepID=A0A088S1E6_9TRYP) HSP 1 Score: 51.2 bits (121), Expect = 7.240e-6 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGS-SAKKIAEE 168
G +E KA +L++ LG + V+LSHSPMR L PEY +RV+V+GS + IA E
Sbjct: 230 GKSEAGKAEELSALLGCHIAARQVLLSHSPMRLLVPEYGEERVLVVGSPNCASIARE 286
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A1X2GYB1_9FUNG (HAD-superfamily hydrolase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GYB1_9FUNG) HSP 1 Score: 49.7 bits (117), Expect = 2.480e-5 Identity = 21/47 (44.68%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLG 141
G TE +KA ++ +GV++ V++SHSPM+ALA +Y +RV+V+G
Sbjct: 67 GMTEASKAEQISDMVGVKIDPDQVIMSHSPMQALAKKYKERRVLVVG 113
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A835WH65_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WH65_9CHLO) HSP 1 Score: 49.7 bits (117), Expect = 2.530e-5 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLG 141
G E KA L+S LGVQV S V+LSH+PMR LAP+ +G V+V G
Sbjct: 126 GVCEARKAAQLSSWLGVQVAPSQVILSHTPMRDLAPQLAGAPVLVSG 172
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: A0A2R5GVK3_9STRA (Haloacid dehalogenase-like hydrolase domain-containing 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVK3_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 3.380e-5 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 1 GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLG 141
G E +AR L+ +L V V + VVL+HSPM+ L PE+ KRVM+LG
Sbjct: 51 GHLESVRARRLSDRLEVPVDPAQVVLAHSPMQQLVPEFGKKRVMILG 97
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Match: E9AFQ9_LEIMA (Uncharacterized protein n=9 Tax=Leishmania TaxID=38568 RepID=E9AFQ9_LEIMA) HSP 1 Score: 49.3 bits (116), Expect = 3.470e-5 Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 7 TEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGS 144
+E KA +L++ LG + + V+L+HSPMR LAPEY +RV+V+G+
Sbjct: 232 SEADKAEELSALLGCDISANQVLLAHSPMRLLAPEYGEERVLVVGA 277 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97451.31486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig97451.31486.1 >prot_Ecto-sp8_S_contig97451.31486.1 ID=prot_Ecto-sp8_S_contig97451.31486.1|Name=mRNA_Ecto-sp8_S_contig97451.31486.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=64bp GCTEEAKARDLTSKLGVQVHRSMVVLSHSPMRALAPEYSGKRVMVLGSSAback to top mRNA from alignment at Ecto-sp8_S_contig97451:274..465+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig97451.31486.1 ID=mRNA_Ecto-sp8_S_contig97451.31486.1|Name=mRNA_Ecto-sp8_S_contig97451.31486.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=192bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97451:274..465+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig97451:274..465+ >mRNA_Ecto-sp8_S_contig97451.31486.1 ID=mRNA_Ecto-sp8_S_contig97451.31486.1|Name=mRNA_Ecto-sp8_S_contig97451.31486.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=192bp|location=Sequence derived from alignment at Ecto-sp8_S_contig97451:274..465+ (Ectocarpus species8 EcLAC_412)back to top |