mRNA_Ecto-sp8_S_contig9699.31414.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: D7G8A3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A3_ECTSI) HSP 1 Score: 298 bits (762), Expect = 5.310e-95 Identity = 157/219 (71.69%), Postives = 167/219 (76.26%), Query Frame = 1
Query: 1 MLARIKEYFEDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARHPRGRDKWTEIDRQNRREKIGPVFAPINNAIQHSNNAFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLKFKLSQTFLVGDDRDNGNESTDRGTRRPLVKEASSGTGGWRG*GREDDLEREGKRLAPPGAGGVGGRPAALL 657
MLARIKEYFEDRGVTASNLPKVIVVH+CLSVAFLALTWAVCYQIQPTQ GPV APIN IQ+SNNAF+VRSRQSFEALISK E RL+ DWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWL KLSQTFLVGDDRDNGNEST+ GTRRPLVKEA+SGT GW + + GK + PPG G G P +
Sbjct: 1 MLARIKEYFEDRGVTASNLPKVIVVHECLSVAFLALTWAVCYQIQPTQ----------------------GPVLAPINKTIQNSNNAFIVRSRQSFEALISKSEKRLSQDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLTLKLSQTFLVGDDRDNGNESTNSGTRRPLVKEAASGTRGWGWLRKGRRSGKRGKTICPPGRRGGGRAPGCFV 197
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: A0A6H5JVT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT6_9PHAE) HSP 1 Score: 132 bits (331), Expect = 5.130e-33 Identity = 77/114 (67.54%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 364 MAISLAESTLFRKLAKPVTIPGKLWLKFKLSQTFLVGDDRDNGNESTDRGTRRPLVKEASSGTGGWRG*GREDDLEREGKR---LAPPGAGGVGGRPAALLPYRR----PLLAR 684
MAISLAESTLFRKLAKPVTIPGKLWL KLSQTFLVGDDRDNGNEST+R TRRPLVKEASSGTGGW G R GKR + PPG G G P + + PLL R
Sbjct: 1 MAISLAESTLFRKLAKPVTIPGKLWLTLKLSQTFLVGDDRDNGNESTNRVTRRPLVKEASSGTGGW---GWLRKGRRSGKRRKAICPPGRRGGGRTPGCFVALPQAASDPLLLR 111
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: A0A835Z1Y4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y4_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.300e-24 Identity = 56/153 (36.60%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 4 LARIKEYFEDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARHPRGRDKWTEIDRQNRREKIGPVFAPINNAIQHSNNAFVVRSRQSFEALISKYETRLTHD-WLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLKFKLSQ 459
L ++ FED+G+T ++ P +H+ L+VAFLA TWA+CYQ QP+Q+ +FAP+ AI+ S N +V+ R+ F +++ E ++ L+ +G D+ R+ +LAEST+FRK KP+TIPGKLW +K+ +
Sbjct: 10 LDHLRGVFEDQGITPADFPTAFAIHELLAVAFLASTWAICYQTQPSQS----------------------ALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIME 140
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: L1JN94_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JN94_GUITC) HSP 1 Score: 66.2 bits (160), Expect = 2.580e-9 Identity = 41/142 (28.87%), Postives = 68/142 (47.89%), Query Frame = 1
Query: 16 KEYFEDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARHPRGRDKWTEIDRQNRREKIGPVFAPINNAIQHSNNAFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWL 441
K YF + G+T ++L K +VVH+ + +++LA +W +CY +QP R + +QN + F + + S +VRS +D R+ +SLAES++ R A+PVT+P KLW+
Sbjct: 24 KAYFLEHGLTPTDLAKALVVHETVGISWLAGSWGLCYAVQPI-------RRLGSRYFQQNIDKFFDKAFTKLQPVFRWSARFALVRS------------------------MDKQRLIMSLAESSILRNAARPVTVPLKLWV 134
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: A0A7S3XSQ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ9_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 3.830e-9 Identity = 46/182 (25.27%), Postives = 83/182 (45.60%), Query Frame = 1
Query: 1 MLARIKEYFEDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARHPRGRDKWTEIDRQNRREKIGPVFAPIN--NAIQHSNNAFVVRSRQSFE--------------------ALISKYETRLTHDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLKFKLSQTFLVGDD 480
M+ IK+YF ++G AS +PK I V++ L ++FL TW++CYQ+QP Q+ + ++ + + E+ P F NA+ +++ ++ K + +LN ++ S +S++FRK KPVTIP K+WL +K+ + +
Sbjct: 26 MINDIKKYFGEKGFEASEIPKAIAVYEILGLSFLVSTWSICYQLQPHQSAVLKSCRQFLQSN-----EQALPKFLSTGYQNAVHSADSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIPGKISEIIGGGFLNTE-----KLVASYIQSSVFRKACKPVTIPAKIWLTWKILHPETISSE 197
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: A0A4Q6D0M9_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6D0M9_9PROT) HSP 1 Score: 56.6 bits (135), Expect = 7.250e-6 Identity = 38/142 (26.76%), Postives = 63/142 (44.37%), Query Frame = 1
Query: 28 EDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARHPRGRDKWTEIDRQNRREKIGPVFAPINNAIQHSNNAFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLKFKL 453
+D+G S++PK I +H+ L + LALTW++CY +Q+ P+F I A + +S ++ + L S + +S ES+ RKL +P+T+PGK++L FKL
Sbjct: 17 KDKGFGPSDIPKAIFIHELLGMFMLALTWSLCYFYPLSQS----------------------PMFVKPLAVISSKMPAALAKSLEANKFL-------------------SSPIGVSYVESSCLRKLIRPLTLPGKVFLTFKL 117
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Match: A0A7S0Z0G7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0G7_9CRYP) HSP 1 Score: 56.6 bits (135), Expect = 1.060e-5 Identity = 38/152 (25.00%), Postives = 67/152 (44.08%), Query Frame = 1
Query: 10 RIKEYFEDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARHPRGRDKWTEIDRQNRREKIGPVFAPINNAIQHSNNAFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLKFKLSQTF 465
+ ++Y +D+G+ +PK IV+++ S F+ W++CY QPT K+G A + ++EA I+K + + G+ + R+A S AE + R KP+ IP KL+L ++L Q +
Sbjct: 46 KAEKYLKDKGIDLVEIPKAIVIYELTSAGFMFGVWSICYLAQPT---------------------KMGLSVAQM-------------AKPGAYEAAIAKGQKMAAR---KEPGL-AARLATSYAEGAVLRTAIKPIIIPVKLYLTWRLQQAY 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9699.31414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9699.31414.1 >prot_Ecto-sp8_S_contig9699.31414.1 ID=prot_Ecto-sp8_S_contig9699.31414.1|Name=mRNA_Ecto-sp8_S_contig9699.31414.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=190bp MLARIKEYFEDRGVTASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQARback to top mRNA from alignment at Ecto-sp8_S_contig9699:1670..5740+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9699.31414.1 ID=mRNA_Ecto-sp8_S_contig9699.31414.1|Name=mRNA_Ecto-sp8_S_contig9699.31414.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4071bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9699:1670..5740+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9699:1670..5740+ >mRNA_Ecto-sp8_S_contig9699.31414.1 ID=mRNA_Ecto-sp8_S_contig9699.31414.1|Name=mRNA_Ecto-sp8_S_contig9699.31414.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=570bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9699:1670..5740+ (Ectocarpus species8 EcLAC_412)back to top |