mRNA_Ecto-sp8_S_contig965.31338.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI) HSP 1 Score: 298 bits (763), Expect = 1.990e-97 Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 1
Query: 40 MGTRILAFLFFWGSTSELLVAASCKDGYPADYSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAYQ 450
MGTRILAFLFFWGST +LLVAASCKDGYPADYSPRGCFADSTIDRIMP IRLVHLQEMTQQGPMSAETCY+ICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAYQ
Sbjct: 1 MGTRILAFLFFWGSTPDLLVAASCKDGYPADYSPRGCFADSTIDRIMPNIRLVHLQEMTQQGPMSAETCYFICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAYQ 137
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.240e-35 Identity = 65/111 (58.56%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 118 GYPADYSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAYQ 450
G PAD+S GC+ADS RI L Q PMSAE CY CDDG+NTHFGM+YS ECWC + P+L ++G EL ECD LC GTTT E CGGF KMSV+EITAY+
Sbjct: 35 GCPADFSFVGCYADSVGKRI--------LNSRGQHNPMSAEMCYMFCDDGVNTHFGMQYSGECWCGIHPELNQNGEELAAGECDFLCAGTTTGEICGGFLKMSVFEITAYK 137
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: D7G445_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G445_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 5.280e-22 Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 130 DYSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITA 444
D+ GC+ADS RIM + + MSA+ CY +C+DG NTHFG ++ ECWC + P L HG ELD CD C GT E CGGF+KM+VY+I A
Sbjct: 30 DFVLVGCYADSRSLRIM--------FDKQSKPIMSADICYDLCNDGTNTHFGTQFGRECWCGIHPALATHG-ELDIDSCDMACKGTG-GENCGGFDKMTVYDIQA 124
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: A0A6H5KUX7_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX7_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.780e-21 Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 130 DYSPRGCFADSTIDRIMPKIRLVHLQEMTQQ-------------GPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITA 444
DY GC+ADS RIM + + + G A+ C+ +C+DG NTHFG +Y ECWC + P L +HG ELD CD C G +E CGGF+KM+VY+I A
Sbjct: 21 DYVLVGCYADSQSGRIMFNKQSEDVMSASVSCTVLLLRTLAFWIGAWRAQICFDLCNDGTNTHFGTQYGEECWCGIHPALARHG-ELDIDSCDFPCAGNE-EETCGGFDKMTVYDIQA 136
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: A0A6H5JN62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN62_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 7.300e-21 Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 130 DYSPRGCFADSTIDRIMPKIRLVHLQEMTQQ-------------GPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITA 444
DY GC+ADS RIM + + + G A+ C+ +C+DG NTHFG +Y ECWC + P L +HG ELD CD C G +E CGGF+KM+VY+I A
Sbjct: 21 DYVLVGCYADSQSGRIMFNKQSEDVMSASVSCTVLLLRTLAFWIGAWRAQICFDLCNDGTNTHFGTQYGEECWCGIHPALARHG-ELDIDSCDFPCAGNE-EETCGGFDKMTVYDIQA 136
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 9.660e-18 Identity = 54/131 (41.22%), Postives = 63/131 (48.09%), Query Frame = 1
Query: 118 GYPADYSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDG-----------LNTHFGM----------EYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAY 447
G PAD+S GC+ADS RI Q PMSAE G N FG +T+CWC + P+L ++G EL ECD LC GTTT E CGGF KMSV+EITAY
Sbjct: 35 GCPADFSFVGCYADSVGKRIF--------NSRGQHYPMSAEEVQPYATYGDVYFPHPELLPYNLLFGHPPLDFLLDPPRINTKCWCGIHPELNQNGEELAAGECDFLCAGTTTGEICGGFLKMSVFEITAY 157
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: A0A8B7Y8Z9_ACAPL (uncharacterized protein LOC110978761 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y8Z9_ACAPL) HSP 1 Score: 73.9 bits (180), Expect = 1.380e-12 Identity = 43/126 (34.13%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 73 WGSTSELLVAASCKDGYPADYSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHF---GMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEIT 441
WG T +L++ S + P GCF DS+ DR++P V ++ S E C+ C + +T + G+EY++EC+C + D K+ + D +CDH+C G T D++CGG+ ++SVY+I+
Sbjct: 15 WGMTFQLMLFLSEQGNVPGYL---GCFGDSS-DRVLPVGPGVDGEKQ------SVEWCFRYCLEDGSTQYKYAGLEYASECFCGNDDDNDKYEEKPDS-DCDHMCRGNT-DQFCGGYWRISVYKIS 128
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: UPI0018745C00 (copper radical oxidase n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI0018745C00) HSP 1 Score: 61.6 bits (148), Expect = 3.100e-8 Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 82 TSELLVAASCKDGYPADYSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITA 444
T+ A S G P ++ GC+ D+ R++ + G MS + C C + G+EYS+EC+C + G + C+ LC G +T EYCGG N++SVY+ TA
Sbjct: 122 TTVTSTAPSVNPG-PTGWTSLGCYNDNIPGRVLA----YRYGVVGGDGAMSVQLCANACKAAGFAYAGVEYSSECYC---DNNILSGAQSGQSGCNMLCSGNST-EYCGGSNRISVYQSTA 233
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: A0A177C782_9PLEO (WSC-domain-containing protein n=1 Tax=Paraphaeosphaeria sporulosa TaxID=1460663 RepID=A0A177C782_9PLEO) HSP 1 Score: 61.6 bits (148), Expect = 3.510e-8 Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 145 GCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHFGMEYSTECWC--AVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITA 444
GC+A+ P + V L T M+ E C C T+FG+EYS EC C A+ P T +DP +C++ C G+ + EYCGG N+M VY++++
Sbjct: 997 GCYAE-------PSGKTVSLNATTSN-IMTVEWCATWCGSAY-TYFGLEYSQECTCGNALNPKSTL----VDPSQCNYPCKGSNS-EYCGGLNRMQVYQMSS 1084
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Match: K3VCG4_FUSPC (Uncharacterized protein n=14 Tax=Fusarium sambucinum species complex TaxID=569360 RepID=K3VCG4_FUSPC) HSP 1 Score: 58.5 bits (140), Expect = 4.140e-7 Identity = 35/105 (33.33%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 133 YSPRGCFADSTIDRIMPKIRLVHLQEMTQQGPMSAETCYYICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPI-ECDHLCFGTTTDEYCGGFNKMSVYEITA 444
Y+ GC+ ++T R +P R V P AE C C G + G+EY EC+C + G PI +C LC G ++ EYCGG N+++VY++ +
Sbjct: 1052 YTSIGCYTEATSGRALPNGRGV-------DSPTVAE-CVDACSSGSFVYAGVEYGGECYCG---NTFSDGSVPAPIADCGMLCNGNSS-EYCGGPNRLNVYQVNS 1144 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig965.31338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig965.31338.1 >prot_Ecto-sp8_S_contig965.31338.1 ID=prot_Ecto-sp8_S_contig965.31338.1|Name=mRNA_Ecto-sp8_S_contig965.31338.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=137bp MGTRILAFLFFWGSTSELLVAASCKDGYPADYSPRGCFADSTIDRIMPKIback to top mRNA from alignment at Ecto-sp8_S_contig965:40..2791- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig965.31338.1 ID=mRNA_Ecto-sp8_S_contig965.31338.1|Name=mRNA_Ecto-sp8_S_contig965.31338.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2752bp|location=Sequence derived from alignment at Ecto-sp8_S_contig965:40..2791- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig965:40..2791- >mRNA_Ecto-sp8_S_contig965.31338.1 ID=mRNA_Ecto-sp8_S_contig965.31338.1|Name=mRNA_Ecto-sp8_S_contig965.31338.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=411bp|location=Sequence derived from alignment at Ecto-sp8_S_contig965:40..2791- (Ectocarpus species8 EcLAC_412)back to top |