mRNA_Ecto-sp8_S_contig9632.31310.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: D7G2R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R1_ECTSI) HSP 1 Score: 280 bits (716), Expect = 2.090e-91 Identity = 182/211 (86.26%), Postives = 187/211 (88.63%), Query Frame = 1
Query: 1 MMSGQTKSYLSAVILLIAAAIQQADAFMVAPAAAGKVSAGNKVEARGDFFKLNQSPYEEYMASRGGGNSAPAPAAPXXXXXXXRSAVSSPASSGGGSKWQPKADWKSAKPSSKPSYAPAAASPRPPTARAAAPAYAPPAXXXXXXXXXAPYSXXXXXXXXXXXXXAKSDEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 633
MM+GQTKSYLSAVILL+AAAIQ ADAFMVAPAAAGKVSAGNKVEARGD FKLN SPYEEYMASRGGG+SAPAPA P RSAVSS SSGGGSKWQPKADWKSAK SSKPSYAPAAASPRPPTAR PAYAPPA XXXX APY XXXXXXXXXXXXXA++ EKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN
Sbjct: 1 MMNGQTKSYLSAVILLLAAAIQ-ADAFMVAPAAAGKVSAGNKVEARGDVFKLNLSPYEEYMASRGGGSSAPAPA-PAAPSSPARSAVSSXXSSGGGSKWQPKADWKSAKASSKPSYAPAAASPRPPTARXXXPAYAPPAAXXXXYTPPAPYXXXXXXXXXXXXXXAQAGEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 209
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: D7G2R0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R0_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.820e-17 Identity = 87/145 (60.00%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 280 GGGSKWQPKADWKSAKPSSKPS-------------------------YAPAAASPRPPTARAA--APAYAPPAXXXXXXXXXAPYSXXXXXXXXXXXXXAKSDEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 633
G G KW+P+ DWKS+ S+ PS + P A +P + A APAYAPPA XXXXXXXX XXXXXXXXXXXX +DEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN
Sbjct: 273 GAGKKWEPRPDWKSSAGSAAPSRXXXXXXXXXXXXXXXXXXXXXKATFNPKADAPWKASGGGAPAAPAYAPPAAXXXXXXXXX---XXXXXXXXXXXXPKAADEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 414
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: A0A7S2MQH4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQH4_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 6.330e-13 Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 1
Query: 514 HIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSK 627
HIG+GGMADTRDPDA++HEDPRKSISAAPSF EYLKS+
Sbjct: 33 HIGSGGMADTRDPDAMEHEDPRKSISAAPSFEEYLKSR 70
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: A0A835YTB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.250e-12 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 505 DEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQ 630
DEKH G GGMADTRDP+ +DHEDPRKSIS AP+F EY+K KQ
Sbjct: 34 DEKHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 75
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: A0A7S1Z902_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z902_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.570e-12 Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 1
Query: 514 HIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSK 627
HIG+GGMADTR+PDAL+HEDPRKSISAAPSF EYLKS+
Sbjct: 34 HIGSGGMADTRNPDALNHEDPRKSISAAPSFEEYLKSR 71
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: A0A835YLE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE0_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.290e-12 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 502 SDEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQ 630
++EKH G GGMADTRDP+ +DHEDPRKSIS AP+F EY+K KQ
Sbjct: 31 AEEKHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 73
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: A0A7S4HPX0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPX0_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.980e-10 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 1
Query: 517 IGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 633
+G GGMADTRDPDALDH+DPRKSISAAPSF EYLK + +
Sbjct: 39 LGAGGMADTRDPDALDHDDPRKSISAAPSFEEYLKLRDS 77
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: A0A6H5JPP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP9_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.100e-10 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 1
Query: 496 AKSDEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 633
+K+ H GTGGMADTRDP + HEDPRKSI AAPSFAEYLKSK+N
Sbjct: 312 SKTPPGHKGTGGMADTRDPAPVKHEDPRKSIPAAPSFAEYLKSKRN 357
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: D8LKW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW1_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 3.430e-10 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 1
Query: 496 AKSDEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 633
+K+ H GTGGMADTRDP ++H DPRKSISAAPSFAEYLKSK+N
Sbjct: 333 SKTAPGHKGTGGMADTRDPAPVNHADPRKSISAAPSFAEYLKSKKN 378
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Match: K0TRG6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TRG6_THAOC) HSP 1 Score: 67.4 bits (163), Expect = 3.430e-10 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 508 EKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQ 630
EK +G+GGMADTRDP+A + EDPRKSISAAPSF EYLK ++
Sbjct: 91 EKKLGSGGMADTRDPEAFEDEDPRKSISAAPSFEEYLKQRE 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9632.31310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9632.31310.1 >prot_Ecto-sp8_S_contig9632.31310.1 ID=prot_Ecto-sp8_S_contig9632.31310.1|Name=mRNA_Ecto-sp8_S_contig9632.31310.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=212bp MMSGQTKSYLSAVILLIAAAIQQADAFMVAPAAAGKVSAGNKVEARGDFFback to top mRNA from alignment at Ecto-sp8_S_contig9632:840..4858- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9632.31310.1 ID=mRNA_Ecto-sp8_S_contig9632.31310.1|Name=mRNA_Ecto-sp8_S_contig9632.31310.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4019bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9632:840..4858- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9632:840..4858- >mRNA_Ecto-sp8_S_contig9632.31310.1 ID=mRNA_Ecto-sp8_S_contig9632.31310.1|Name=mRNA_Ecto-sp8_S_contig9632.31310.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9632:840..4858- (Ectocarpus species8 EcLAC_412)back to top |