mRNA_Ecto-sp8_S_contig96291.31302.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: E1UWC6_PICPA (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Komagataella TaxID=460517 RepID=E1UWC6_PICPA) HSP 1 Score: 365 bits (936), Expect = 5.300e-121 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSPFNELFIH 579
IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSPFNELFIH
Sbjct: 298 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIYWFALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSPFNELFIH 490
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: A0A1E4TMW7_PACTA (Uncharacterized protein n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TMW7_PACTA) HSP 1 Score: 293 bits (750), Expect = 1.480e-95 Identity = 153/193 (79.27%), Postives = 171/193 (88.60%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSPFNELFIH 579
IK+IIALSTMSQVG MMIAIGVS YNLALFHLICHSFFKALLFMSAGSVIHSI SEYQD+R++G F+Q++PL YTC+ IASLSLMAIP LTG+YSKDIIIESMYG Y FSG+I+Y FAL SAT TSLYS+RLIYYTF++ PN+ KYIY L ENDI+LI PMIILTILSIF GY+LRD+YLGMGS F LFIH
Sbjct: 123 IKRIIALSTMSQVGFMMIAIGVSAYNLALFHLICHSFFKALLFMSAGSVIHSIASEYQDLRVFGSFKQYLPLTYTCMLIASLSLMAIPSLTGYYSKDIIIESMYGNYEFSGYIVYLFALSSATLTSLYSLRLIYYTFIHTPNNSKYIYYYLFENDIILIIPMIILTILSIFIGYILRDVYLGMGSSFYNLFIH 315
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: S5TE96_PICKL (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=cellular organisms TaxID=131567 RepID=S5TE96_PICKL) HSP 1 Score: 278 bits (711), Expect = 2.780e-87 Identity = 135/194 (69.59%), Postives = 171/194 (88.14%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSP-FNELFIH 579
IKKIIALSTMSQVGIMM+ +G+S YNLA++HLICHSFFKALLFMSAG++IH++++EYQDIR YGGF +F+PL+Y CIFIASLSLMA+PGLTG+YSKDIIIES+YG YTF+G+IIY FA+ SAT TS+YS+RL+YY FLN PN+P+Y+Y++L EN I + PMIIL + SIF GYL +D+YLG+G+ +N +FIH
Sbjct: 298 IKKIIALSTMSQVGIMMLGVGISAYNLAIYHLICHSFFKALLFMSAGAIIHAVMNEYQDIRTYGGFHKFLPLSYICIFIASLSLMALPGLTGYYSKDIIIESLYGSYTFTGYIIYWFAIASATLTSVYSVRLVYYVFLNTPNNPRYVYMHLNENPIFMYIPMIILALFSIFVGYLAKDLYLGLGATIYNSIFIH 491
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: A0A2U9RAN3_PICKU (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Pichia kudriavzevii TaxID=4909 RepID=A0A2U9RAN3_PICKU) HSP 1 Score: 273 bits (697), Expect = 3.360e-85 Identity = 135/194 (69.59%), Postives = 169/194 (87.11%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSP-FNELFIH 579
IKKI+ALSTMSQVGIMM+ +G+S YNLA++HLICHSFFKALLFMSAG++IH++I+EYQD+R YGGF +F+PL+Y CIFIASLSLMA+PGLTG+YSKDIIIES+YG YTF+G+IIY FA+ SAT TS+YSIRL+YY F N PN+PKY+Y++L EN I++ PMIIL SIF GYL +D+YLG+G+ +N FIH
Sbjct: 298 IKKIMALSTMSQVGIMMLGVGMSAYNLAMYHLICHSFFKALLFMSAGAIIHAVINEYQDMRTYGGFHKFLPLSYICIFIASLSLMALPGLTGYYSKDIIIESLYGSYTFTGYIIYWFAIASATLTSVYSIRLMYYIFFNIPNNPKYVYMHLNENPIIMYIPMIILATFSIFIGYLAKDLYLGLGATIYNNTFIH 491
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: C7FEY5_DEKBR (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Dekkera bruxellensis TaxID=5007 RepID=C7FEY5_DEKBR) HSP 1 Score: 269 bits (687), Expect = 1.030e-83 Identity = 136/194 (70.10%), Postives = 166/194 (85.57%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSP-FNELFIH 579
IK+IIALSTMSQVGIMM+ IG+S YNLALFHLICHSFFKALLFMSAG++IH++ + YQDIR YG F +F+PL Y CI IASLSLMA+PGLTG+YSKDIIIE++YG YT +G+IIY FAL SAT TS+YSIRLIYY F N PN+PKYIY++L+EN ++ PM IL + SIF GYL++D+YLGMG+P +N +FIH
Sbjct: 298 IKRIIALSTMSQVGIMMLGIGISAYNLALFHLICHSFFKALLFMSAGAIIHAVGNGYQDIRTYGSFLKFLPLTYICILIASLSLMALPGLTGYYSKDIIIETLYGSYTLTGYIIYWFALGSATLTSIYSIRLIYYLFFNKPNNPKYIYLHLRENPTLMYIPMTILALFSIFIGYLIKDLYLGMGTPLYNNMFIH 491
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: C7FEW0_BRECS (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Brettanomyces custersianus TaxID=13368 RepID=C7FEW0_BRECS) HSP 1 Score: 268 bits (685), Expect = 2.030e-83 Identity = 131/194 (67.53%), Postives = 166/194 (85.57%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSP-FNELFIH 579
+K+I+ALSTMSQVGIMM+ +G+S YNLA+FH+ICHSFFKALLFMSAG++IH++ + YQDIR YGGF +F+PL Y C+FIASLSLMA+PGLTG+YSKDIIIE++YG YTF+G+IIY FAL SA TS+YSIRL+YY F N PN PKYIY++L EN ++ PM IL +LSIF GYL +D+YLG+G+P +N +FIH
Sbjct: 298 VKRIVALSTMSQVGIMMLGVGISAYNLAIFHVICHSFFKALLFMSAGAIIHAVANGYQDIRTYGGFLKFLPLTYVCVFIASLSLMALPGLTGYYSKDIIIETLYGSYTFTGYIIYWFALSSAVLTSIYSIRLMYYVFFNRPNDPKYIYMHLTENPTLMYIPMSILALLSIFVGYLAKDLYLGLGTPIYNYVFIH 491
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: S5TEX4_9ASCO (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Ogataea thermophila TaxID=369265 RepID=S5TEX4_9ASCO) HSP 1 Score: 264 bits (675), Expect = 6.480e-82 Identity = 137/195 (70.26%), Postives = 164/195 (84.10%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKE--NDIVLITPMIILTILSIFGGYLLRDIYLGMGSP-FNELFI 576
IKKIIALSTMSQ+ IM+++IG+S YNLALFHLICHSFFKALLFMSAG++IHS++ + QDIR YGG+ +F+PL+YTCI IASLSLMAIPGLTG+YSKDIIIES+YG YT SGFII+ F L+SA+ TS+YSIRLIYY F N PN PKYIY NL E N + PMIIL I SIF GY L+D+YLG+G+P +N +FI
Sbjct: 298 IKKIIALSTMSQISIMILSIGISSYNLALFHLICHSFFKALLFMSAGTIIHSVLHQSQDIRTYGGYLKFLPLSYTCILIASLSLMAIPGLTGYYSKDIIIESLYGNYTLSGFIIFWFTLLSASLTSIYSIRLIYYIFYNTPNGPKYIYNNLSEGNNPFGIYVPMIILAIFSIFAGYFLKDLYLGLGTPLYNNIFI 492
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: E7E830_OGAPD (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Ogataea parapolymorpha (strain ATCC 26012 / BCRC 20466 / JCM 22074 / NRRL Y-7560 / DL-1) TaxID=871575 RepID=E7E830_OGAPD) HSP 1 Score: 252 bits (643), Expect = 3.550e-77 Identity = 127/195 (65.13%), Postives = 163/195 (83.59%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKE--NDIVLITPMIILTILSIFGGYLLRDIYLGMGSP-FNELFI 576
IKKIIALSTMSQ+ +MM+++G+S YNLALFHL+CHSFFKAL FMSAG++IHS++ + QDIR YGG+ +F+PL+YTC+ IASLSLMA+PGLTG+YSKDIIIES+YG YT SGFI++ F L+SA+ TS+YSIRL+YY F N PN PKYIY NL E N + PMI+L + S+F GY L+D+YLG+G+P +N +FI
Sbjct: 298 IKKIIALSTMSQISMMMLSMGISSYNLALFHLMCHSFFKALTFMSAGTIIHSVLHQSQDIRTYGGYTKFLPLSYTCMLIASLSLMAMPGLTGYYSKDIIIESLYGNYTTSGFIMFWFTLLSASLTSIYSIRLMYYMFYNTPNGPKYIYNNLSEGNNPFGMYVPMIMLAMFSMFAGYFLKDLYLGLGTPLYNNMFI 492
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: K9L3A6_MAGMU (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Magnusiomyces magnusii TaxID=43963 RepID=K9L3A6_MAGMU) HSP 1 Score: 251 bits (640), Expect = 9.450e-77 Identity = 127/193 (65.80%), Postives = 157/193 (81.35%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSPFNELFIH 579
IKKIIALSTMSQ+G+M++AIG+S YN++LFHL CH+ FKALLFMSAGS+IHS++SE QDIR YGGF ++P+ Y CI IASLSLMA+PGLTG+YSKDIIIES G YT SG+I+Y +L SAT T+LYSIRL+Y F N PN+ ++IY N+ E+ ++ PMI L+ SIF GYL RDIYLG GSPFN +FIH
Sbjct: 298 IKKIIALSTMSQLGLMVVAIGLSAYNISLFHLFCHAMFKALLFMSAGSIIHSVVSESQDIRTYGGFIHYLPVTYVCILIASLSLMALPGLTGYYSKDIIIESTIGVYTISGYIVYWLSLSSATLTTLYSIRLLYLVFYNVPNASRFIYHNMHESSWFMLVPMIFLSFASIFIGYLTRDIYLGFGSPFNSIFIH 490
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Match: A0A0A1I5R0_GEOCN (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0A1I5R0_GEOCN) HSP 1 Score: 246 bits (629), Expect = 4.330e-75 Identity = 123/193 (63.73%), Postives = 157/193 (81.35%), Query Frame = 1
Query: 1 IKKIIALSTMSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDIRMYGGFRQFIPLAYTCIFIASLSLMAIPGLTGFYSKDIIIESMYGEYTFSGFIIY*FALISATCTSLYSIRLIYYTFLNNPNSPKYIYINLKENDIVLITPMIILTILSIFGGYLLRDIYLGMGSPFNELFIH 579
IKKI+ALSTMSQ+G+M++AIG+S YN++LFHL CH+ FKALLFMSAGS+IHSI+SE QDIR YGG ++P+ Y C+ IASLSLMA PGLTG+YSKDIIIES G YT SG+I+Y +L SAT T+LYSIRL+Y F N PN+ K+ Y+NL E+ +++ PMI+L+ S+F GY+ RDIYLG GSPFN +F+H
Sbjct: 299 IKKIMALSTMSQLGLMVVAIGLSAYNMSLFHLFCHAMFKALLFMSAGSIIHSIVSESQDIRTYGGLLNYLPVTYVCMLIASLSLMAFPGLTGYYSKDIIIESTIGVYTMSGYIMYWLSLSSATLTTLYSIRLLYLVFFNTPNNSKFAYLNLHESSWLMLMPMIMLSFASMFLGYITRDIYLGFGSPFNSMFMH 491 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96291.31302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig96291.31302.1 >prot_Ecto-sp8_S_contig96291.31302.1 ID=prot_Ecto-sp8_S_contig96291.31302.1|Name=mRNA_Ecto-sp8_S_contig96291.31302.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=107bp MSQVGIMMIAIGVSCYNLALFHLICHSFFKALLFMSAGSVIHSIISEYQDback to top mRNA from alignment at Ecto-sp8_S_contig96291:1..579- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig96291.31302.1 ID=mRNA_Ecto-sp8_S_contig96291.31302.1|Name=mRNA_Ecto-sp8_S_contig96291.31302.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=579bp|location=Sequence derived from alignment at Ecto-sp8_S_contig96291:1..579- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig96291:1..579- >mRNA_Ecto-sp8_S_contig96291.31302.1 ID=mRNA_Ecto-sp8_S_contig96291.31302.1|Name=mRNA_Ecto-sp8_S_contig96291.31302.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=321bp|location=Sequence derived from alignment at Ecto-sp8_S_contig96291:1..579- (Ectocarpus species8 EcLAC_412)back to top |