mRNA_Ecto-sp8_S_contig96121.31275.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A6H5JGA1_9PHAE (Carboxypeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGA1_9PHAE) HSP 1 Score: 131 bits (330), Expect = 2.110e-34 Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1
Query: 49 DYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
DYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQEN EDAPV+
Sbjct: 26 DYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENAEDAPVI 87
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A7S4QN09_9STRA (Carboxypeptidase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QN09_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 9.530e-9 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 52 YTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
YT EALAD++ ++LPG L GF+ FSGY V RNIFYW++E+Q + E+ PVV
Sbjct: 77 YTSEALADQI--TSLPG---LNYNHGFNQFSGYFKVSEHYNRNIFYWYVESQNDPENDPVV 132
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A087SC47_AUXPR (Carboxypeptidase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SC47_AUXPR) HSP 1 Score: 57.8 bits (138), Expect = 6.180e-8 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 55 TPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
T EA ADKV S+LPG NL+ D F ++SGYI VDAE GR++FY F+E+Q++ P+V
Sbjct: 39 TKEAAADKV--SSLPGWGNLQ-DDEFDIYSGYITVDAEAGRSLFYVFVESQDDPAADPLV 95
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A1Q9CE03_SYMMI (Carboxypeptidase n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CE03_SYMMI) HSP 1 Score: 55.8 bits (133), Expect = 3.080e-7 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 52 YTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVD---AENGRNIFYWFMEAQENTEDAPVV 234
Y P AL D++ + LPGA ++ F MFSGYI+V A R IFYWF+EAQ N +APV+
Sbjct: 98 YGPAALQDEI--THLPGAPPVD----FRMFSGYIDVSPSWANGSRQIFYWFVEAQSNASEAPVI 155
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: W7TR82_9STRA (Carboxypeptidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR82_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 7.610e-7 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 43 DADYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
+A YT EALAD+V LPG L K F F+GY+N+ +NIFYW++EA+E+ ++AP+V
Sbjct: 115 NASYTKEALADEV--LDLPG---LTEKVTFRQFAGYLNLKGTQ-KNIFYWYVEAEESPDEAPLV 172
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A2G9HWJ6_9LAMI (Carboxypeptidase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HWJ6_9LAMI) HSP 1 Score: 53.9 bits (128), Expect = 1.400e-6 Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 1 WVFSLFLFV------YGPCADA---DYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
WVFSLFL + C+ + D + L D+V LPG +N +V F+ F+GY+ V+ E+GR +FYWF EA+E+ P++
Sbjct: 6 WVFSLFLICCILNLRFISCSTSFSPDPPNQQLLDRV--LNLPG-QNFDVS--FAHFAGYVTVNEESGRTLFYWFFEAEEDPSSKPLL 87
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A803MNX5_CHEQI (Carboxypeptidase n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MNX5_CHEQI) HSP 1 Score: 53.5 bits (127), Expect = 1.920e-6 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 WVFSLFLFVYGPCADADYTPEALA----DKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
W+ + + V G + +PE +A D+V LPG + GF ++GY+NV+A +GR +FYWF EA +N PVV
Sbjct: 21 WLTTHVMIVSGSTSTLGLSPEVVAKQNADRV--VDLPGQPVV----GFKHYAGYVNVNASHGRELFYWFFEADQNPHHKPVV 96
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A6A4LTH1_9ERIC (Carboxypeptidase (Fragment) n=2 Tax=Rhododendron TaxID=4346 RepID=A0A6A4LTH1_9ERIC) HSP 1 Score: 53.1 bits (126), Expect = 2.610e-6 Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 1 WVFSLFLFVY------GPCADA---DYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
WVF L ++++ G C+ + D T + L D+V S LPG + +V F+ +SGY+ V+ E GR +FYWF+EA + P+V
Sbjct: 6 WVFVLCIYIFINNVYIGSCSSSFSSDPTAQQLLDRV--SELPG-QTFDVS--FAHYSGYVTVNEEFGRALFYWFVEAVDEPSSKPLV 87
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A8J4BMJ6_9CHLO (Carboxypeptidase (Fragment) n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BMJ6_9CHLO) HSP 1 Score: 52.8 bits (125), Expect = 3.640e-6 Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 49 DYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
D TPEA ADK+ +LPG N S F GYI VDA GR +FY+F+E++ + + PVV
Sbjct: 49 DLTPEAAADKI--ISLPGFLNTLPS---SQFGGYITVDANRGRRLFYYFVESERDPVNDPVV 105
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Match: A0A7R9ZL37_9STRA (Carboxypeptidase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZL37_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 3.640e-6 Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 94 LPGAENLEVKDGFSMFSGYINVDAENGRNIFYWFMEAQENTEDAPVV 234
LPG L GF+ +SGY+NVD ++GR IFYW++E+Q + E P+V
Sbjct: 132 LPG---LGYDPGFNQYSGYLNVDEDHGRRIFYWYVESQSSPEHDPLV 175 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96121.31275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig96121.31275.1 >prot_Ecto-sp8_S_contig96121.31275.1 ID=prot_Ecto-sp8_S_contig96121.31275.1|Name=mRNA_Ecto-sp8_S_contig96121.31275.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=78bp WVFSLFLFVYGPCADADYTPEALADKVDWSTLPGAENLEVKDGFSMFSGYback to top mRNA from alignment at Ecto-sp8_S_contig96121:300..533+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig96121.31275.1 ID=mRNA_Ecto-sp8_S_contig96121.31275.1|Name=mRNA_Ecto-sp8_S_contig96121.31275.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=234bp|location=Sequence derived from alignment at Ecto-sp8_S_contig96121:300..533+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig96121:300..533+ >mRNA_Ecto-sp8_S_contig96121.31275.1 ID=mRNA_Ecto-sp8_S_contig96121.31275.1|Name=mRNA_Ecto-sp8_S_contig96121.31275.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=234bp|location=Sequence derived from alignment at Ecto-sp8_S_contig96121:300..533+ (Ectocarpus species8 EcLAC_412)back to top |