mRNA_Ecto-sp8_S_contig9612.31274.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: A0A6H5K6N9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N9_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 1.860e-156 Identity = 239/272 (87.87%), Postives = 249/272 (91.54%), Query Frame = 2
Query: 59 MAMYTLTLARRCRTGWQANRSLIGALSSSRSRLLFTDDRAARPGPTPSPRIAGASMDLKAAARPSSPPWNTYPGARFSSLASPNEFVAAGSPGSXXXXXXXSDFTVVEDGTEKFLVAARVLEANQVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEYIDGGATGSPPLTGAVKTWAEEHGIV*RDSQRSM 874
MAM+TLTLARRCRTGWQA+ SLIGALSSSRSRLLFTDDRA RPGPTP PRIAGASM L A A+PSSP YPGA FSSLA PNEFVAAGSP S XXXXXSD+TVV+DGTEKF+VAARVLEANQVLF+RVEGLVTGVKTRHSVQ+SKERHLE G +L LMNHSCEPNCQLEVVDTAEQPYLRV VRAPRVQPNE L IDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAE+EEYIDGGATGSPPLTGAVKTWAEEHGI RDSQRSM
Sbjct: 1 MAMHTLTLARRCRTGWQASGSLIGALSSSRSRLLFTDDRATRPGPTPPPRIAGASMALTADAKPSSPS-PVYPGAGFSSLARPNEFVAAGSPVSSSXXXXXSDYTVVQDGTEKFVVAARVLEANQVLFSRVEGLVTGVKTRHSVQLSKERHLETGSDLALMNHSCEPNCQLEVVDTAEQPYLRVTVRAPRVQPNEALEIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIACRDSQRSM 271
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: A0A6H5JKC4_9PHAE (Post-SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKC4_9PHAE) HSP 1 Score: 340 bits (872), Expect = 3.690e-109 Identity = 199/356 (55.90%), Postives = 221/356 (62.08%), Query Frame = 2
Query: 65 MYTLTLARRCRTGWQANRSLIGALSSSRSRLLFTDDRAARPG------PTPSPRIAGASMDLKAAARPSSPPWNTYPGARFSSLASPN-EFVAA--------------GSPGSXXXXXXXS-----------------------DFTVVEDGTEKFLVAARVLEANQVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTA--------------------------------------------------EQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEYIDGGATGSPPLTGAVKTWAEEHGIV 850
M+TLTL RRC TGWQA+ SLI AL+SSR+RLLFTDD A RPG P PS R+ GASM K+ SS W+TY GA SSLA PN ++VA G G+ DFTVV+DGTEKFLVAARVLEANQ +FARVEGLVTGV TRHSVQVSKERHLEA +L+ +NHSCEPNCQLEVVD A EQPYLRV VRAPR++PNELLTIDYNAMEIDM+CPFDCQCGAVRCRGWVSGFSNLSRAE++EYIDGGAT SPPLTGAVKTWA+E+ IV
Sbjct: 1 MHTLTLVRRCPTGWQASGSLIRALTSSRNRLLFTDDLATRPGGEEHGGPPPSTRVGGASMVPKSPVTSSSTAWSTYRGAWLSSLAGPNNDYVAGDVAVMVSGERGGGIGGKGNTLAPFPVGFSSRSXXXXXXXXXXXXXXXXSLDFTVVKDGTEKFLVAARVLEANQAIFARVEGLVTGVSTRHSVQVSKERHLEARCDLMFLNHSCEPNCQLEVVDAADHWVGWKSWANPNPIGIRKGVIEILKCSTLEKYCSNNRRAHAMNTFCNPQEQPYLRVTVRAPRIRPNELLTIDYNAMEIDMSCPFDCQCGAVRCRGWVSGFSNLSRAEQKEYIDGGATKSPPLTGAVKTWAQENDIV 356
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: D8LGU6_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU6_ECTSI) HSP 1 Score: 219 bits (559), Expect = 4.050e-66 Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 2
Query: 539 MNHSCEPNCQLEVVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEYIDGGATGSPPLTGAVKTWAEEHGIV 850
MNHSCEPNCQLEVVDTAEQPYLRV VRAPRVQP+ELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAE+EEYIDGGATGSPPLTGAVKTWAEEHGIV
Sbjct: 1 MNHSCEPNCQLEVVDTAEQPYLRVTVRAPRVQPSELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEQEEYIDGGATGSPPLTGAVKTWAEEHGIV 104
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: D8LGU7_ECTSI (Post-SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU7_ECTSI) HSP 1 Score: 111 bits (278), Expect = 2.770e-26 Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 2
Query: 668 MEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEYIDGGATGSPPLTGAVKTWAEEHGIV 850
MEIDM+CPF+CQCGAVRCRG VSGFSNLSR E++EYI+GGAT SP LTGAVK WAEEH IV
Sbjct: 1 MEIDMSCPFECQCGAVRCRGLVSGFSNLSRVEQKEYINGGATRSPSLTGAVKMWAEEHNIV 61
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: A0A3M6VG35_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VG35_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.720e-14 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 2
Query: 449 VEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAE 763
V G + + TR +VQ+++ +H+ G L +NHSC PN ++EVV+T + V ++ E LT DY+ E DM FDC+CGA++CRG + G LS E
Sbjct: 81 VSGNLYSMPTRFTVQLTRNKHMHFTGGLEFINHSCNPNTRIEVVETEAKVSF---VAITSIKKGEHLTFDYSTSEWDMDEKFDCRCGALKCRGHIGGAKYLSDDE 182
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: W5WEZ3_9PSEU (Uncharacterized protein n=1 Tax=Kutzneria albida DSM 43870 TaxID=1449976 RepID=W5WEZ3_9PSEU) HSP 1 Score: 75.9 bits (185), Expect = 2.120e-12 Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 2
Query: 362 SDFTVVEDGTEKFLVAARVLEANQVLFARVEGLVTGVKTRHSVQVSKERHLEA----GGNLVL-------MNHSCEPNCQLEVVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLS 754
S VV G E +VA+R LF V G +TGV TR+SVQ+ + H++ G V+ NHSCEPN +L D + LR + R + T Y E +M PFDC+CG+ +C G +SGF +LS
Sbjct: 6 SGVAVVRSGGEYTIVASRPFATGSRLF-EVNGEITGVPTRYSVQIGPDSHIDLPDRYGTEEVMDRFFWRFTNHSCEPNVRL---DGRQFFALRPIERWQEI------TFHYGTTEYEMAEPFDCRCGSAQCEGRISGFRHLS 137
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: A7T2D6_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7T2D6_NEMVE) HSP 1 Score: 75.5 bits (184), Expect = 2.510e-12 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 2
Query: 479 RHSVQVSKERHLEAGGNLVLMNHSCEPNCQLE------VVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEYIDGGATGSPPLTGAVK 823
RH+VQVSK++H+ G + NH+C P + E VV + +V + E +T +Y E +M PF+CQCGA +C G V GF +L+ +++E + A SP + +K
Sbjct: 45 RHTVQVSKDKHIMPEGKVKFTNHACSPTAEFEFKARDGVVAPEGKELSWHLVATRDINKGEEITFNYTLTEYEMDAPFECQCGAKQCLGRVQGFKHLTTEQQQEIM---AKVSPAIKEIIK 162
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: A0A7Y1GVH2_9PSED (SET domain-containing protein-lysine N-methyltransferase n=3 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A7Y1GVH2_9PSED) HSP 1 Score: 75.5 bits (184), Expect = 3.240e-12 Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 2
Query: 404 VAARVLEANQVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEYID 781
+ RV +++L A++ G G + H++Q+S HL L+ HSC+PN L++ + + ++P LLT+DY E + C F CQCGA+ CRGW++G + + +++
Sbjct: 48 IKTRVAFDSRILMAKISGYALGERHLHTLQISSRIHLYDPWFSGLILHSCDPNVFLDISELE-------LWSVQAIRPGTLLTMDYATTEDALLCQFACQCGALNCRGWITGAKEPLNPQGQLFME 166
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: UPI00195C5168 (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Lentzea nigeriaca TaxID=1128665 RepID=UPI00195C5168) HSP 1 Score: 74.3 bits (181), Expect = 6.180e-12 Identity = 50/146 (34.25%), Postives = 71/146 (48.63%), Query Frame = 2
Query: 362 SDFTVVEDGTEKFLVAARVLEANQVLFARVEGLVTGVKTRHSVQVSKERHLEAGGNLVL-----------MNHSCEPNCQLEVVDTAEQPYLRVMVRAPRVQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEK 766
S VV E LVA R + ++LF VEG VT V TR++VQV ++ H++ MNHSC+P + R ++ V+ + +T +YN E DM PF C+CG+ RC G V GF +LS E+
Sbjct: 11 SAVAVVRADGEYRLVANRPITEGELLFT-VEGEVTTVPTRYTVQVGRDTHVDVPAEYDFEAILDRFYWRFMNHSCDPTVFVRG---------RAVISLKPVEFGQDITFNYNTTEFDMAEPFACRCGSDRCSGRVQGFRHLSGEER 146
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Match: A0A3L7SDW3_9BACT (SET domain-containing protein-lysine N-methyltransferase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SDW3_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 6.250e-12 Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 2
Query: 473 KTRHSVQVSKERHLEAGGNLVLMNHSCEPNCQLEVVDTAEQPYLRVMVRAPR-VQPNELLTIDYNAMEIDMTCPFDCQCGAVRCRGWVSGFSNLSRAEKEEY 775
++R ++QV+ + H+E G VLMNHSC+PNC + + + + +RA R + E +TIDY+ E ++T C+CG+++CRG V+G+ +LS K Y
Sbjct: 387 RSRRTIQVAADMHVEPDGVAVLMNHSCDPNCGVVIRSGVRE----IEIRALRPIAAGEEITIDYDTFEYEVTLGGACRCGSLKCRGRVAGYKHLSSDVKARY 484 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9612.31274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9612.31274.1 >prot_Ecto-sp8_S_contig9612.31274.1 ID=prot_Ecto-sp8_S_contig9612.31274.1|Name=mRNA_Ecto-sp8_S_contig9612.31274.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=265bp MAMYTLTLARRCRTGWQANRSLIGALSSSRSRLLFTDDRAARPGPTPSPRback to top mRNA from alignment at Ecto-sp8_S_contig9612:4083..6456+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9612.31274.1 ID=mRNA_Ecto-sp8_S_contig9612.31274.1|Name=mRNA_Ecto-sp8_S_contig9612.31274.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2374bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9612:4083..6456+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9612:4083..6456+ >mRNA_Ecto-sp8_S_contig9612.31274.1 ID=mRNA_Ecto-sp8_S_contig9612.31274.1|Name=mRNA_Ecto-sp8_S_contig9612.31274.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9612:4083..6456+ (Ectocarpus species8 EcLAC_412)back to top |