mRNA_Ecto-sp8_S_contig9590.31237.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9590.31237.1
Unique NamemRNA_Ecto-sp8_S_contig9590.31237.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: D7G755_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G755_ECTSI)

HSP 1 Score: 660 bits (1704), Expect = 1.890e-236
Identity = 347/377 (92.04%), Postives = 353/377 (93.63%), Query Frame = 1
Query:    1 FSSVVVTLLGAATAYFINANELLRATHFYLNLGWSEETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYGWPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMSQLPSNSPAQEPLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTALGVLRGE 1131
            + SVVVTLLGAATAYFINANELLRATHFYLN GWSEETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYGWPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQ                   ESMANTEEFIGALKTSLWIIWSSYSVLGGVALLI+QQDGPVSDNIMSQLPS+S AQEPLLLFIT+ATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPR PKEEDGESHSSGELSPALRYGLRAALVLFTGVCAT VPNFGVV+TLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCF+GAVTCVFTTTTTALGVLRGE
Sbjct:  129 YISVVVTLLGAATAYFINANELLRATHFYLNPGWSEETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYGWPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQ-------------------ESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIFQQDGPVSDNIMSQLPSDSLAQEPLLLFITMATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRSPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATIVPNFGVVITLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFVGAVTCVFTTTTTALGVLRGE 486          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A6H5JMK9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK9_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 1.880e-134
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 1
Query:  457 ESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMSQLPSNSPAQEPLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTALGVLRGE 1131
            ESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQ GPVSDNIMSQLPS SPAQEPLLLFIT+ATLFTYPLAMQPV SIFEQALIKAGFGQASAR+GGDDQRYGALTAAETGTDPRFPKEEDG+SHSSGELSPALRYGLRAALVLFTGVC+TSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTALGVLRGE
Sbjct: 1028 ESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQHGPVSDNIMSQLPSGSPAQEPLLLFITMATLFTYPLAMQPVCSIFEQALIKAGFGQASARIGGDDQRYGALTAAETGTDPRFPKEEDGDSHSSGELSPALRYGLRAALVLFTGVCSTSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTALGVLRGE 1252          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A4D9D3P3_9STRA (Aa_trans domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3P3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.300e-26
Identity = 127/418 (30.38%), Postives = 179/418 (42.82%), Query Frame = 1
Query:   16 VTLLGAATAYFINANELLRATHFYLNLGWSEETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGL---------------EMYGWPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMSQLPSNSPAQEPLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPAL-----------------------RYG---------------LRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTA 1110
            VT +G   +Y I A++LL  T   L    S       NT + + ++ PL+C KSL+ LS  S   I+AL+  F  II LG+               E  G P      +WD  +      G S FFG+A FS+G   ++  IQ S                   M   E F  A+  +L  + ++Y ++    +L+Y  D  V  NI++ L S SP    + L + +  + TYPLA+ P+    E+AL     G   AR+     R+ +L    +   PR   E +  S S   L+  L                       RY                LRA +V  T + AT VP FG VV  LG+FSV + SFVLPPLFH ++F  RL   E   D  + F+G V CV  T+ TA
Sbjct:   83 VTFVGCGVSYLIAASDLLEITPVSLVWAGSPIFTRLANTLLCVLVVLPLSCAKSLSFLSYTSFFGIIALLLSFITIIALGINHTSPTAXXXXXXXVEAGGGPS-----AWDRAFETDA-KGLSRFFGIACFSFGIPPLLFPIQGS-------------------MPCPEFFRPAVGLALVSVAAAYILIAETVVLLY--DFVVPPNILTVL-STSPLSTTVRLSMVLVCVLTYPLAIVPLCESVEKALE----GPRVARI----YRWESLQGPTSYYQPR--DEPEALSSSRSILAQCLGRREEISRETPRSPSDRPPGHMPRYQQPHSKSRTWSWRVLILRACIVFATALLATLVPCFGGVVAFLGAFSVAILSFVLPPLFHLILFNARLLRREALIDVGMFFLGLVVCVGATSLTA 462          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A7S3HQW5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQW5_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.490e-19
Identity = 101/369 (27.37%), Postives = 156/369 (42.28%), Query Frame = 1
Query:    7 SVVVTLLGAATAYFINANELLRATHFYLNLGWSEETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYG---------------WPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGP--VSDNIMSQLPSNSPAQEPLLLFITIATLFTYPLAMQPVSSIFEQAL------IKAGFGQASARVGG----------DDQRYGALTAAE---TGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFH 1005
            S+++TLLG   A+ I    LL      +   +   TA+   T I   ++YPL+C++ +  ++ LSL  +V LVAG   II  G+  YG                   E V  W     P +    + F GV  F +    +   IQ                   ESM +  EF  A+  SL  +W  Y +LG +  ++Y  D    + +NI+S LP +S     +   +    L TYP+ + P + + E  L      +    G +SAR             +  RY     A+   +   PR    +  ++    E S   R G R  +VLFT V A  +P FG+V++LLG F++ +  F+LPPL H
Sbjct:  100 SIIMTLLGVCIAFQITFATLLHE----VPGNFLSNTAL---TIISGIVVYPLSCLRDMDAMASLSLVGMVCLVAGVVAIIAHGVHAYGSIAYSEFDYSEDIQQLHDHERVALW-----PASLADTAAFLGVTIFCFDICSLAFPIQ-------------------ESMQHKHEFGTAVLWSLVFVWLVYVLLGDIGAVLYVHDVSHGIRENILSNLPVHSTISLLVRWAMACVGLLTYPITLAPAAQMLEHHLATTYEHLLRSSGPSSARNSASYSPIEEDFEESPRYTRRANADAVLSSPSPRVDTTKIVDTADWSEPSVYTRCGNRFFMVLFTTVVAAYIPCFGMVISLLGGFTIAILDFILPPLLH 437          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A196SBX9_BLAHN (Transmembrane amino acid transporter protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SBX9_BLAHN)

HSP 1 Score: 74.3 bits (181), Expect = 5.450e-11
Identity = 86/376 (22.87%), Postives = 148/376 (39.36%), Query Frame = 1
Query:    7 SVVVTLLGAATAYFINANELLRATHFYLNLGWSE------ETAMYVNTFIYMCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYGWPPMEEVLSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQ-DGPVSDNIMSQLPSNSPAQEPLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTAL 1113
            S +VTL+G   AY I  N+++        L WS+         ++      +C+ YP+  ++S++ +S  S      L+A   V+I  G+ +Y  P ++  + W     P+ +   +  FGV  FS G   +                    L+S  SM     F  AL  SL I    Y       ++ Y+  +G + D I++ +P  S       + +++    +YP+A+ P                             AL A E             E  +   ++   R   R  +V+ T + A  +P+F +VV+ +G F++++ SF+LPPL H  +     S A    D +   +G       TTTT L
Sbjct:   76 SFIVTLIGVGAAYQITFNKMIAG------LPWSDWHFPLGNNVLFWTGLFALCI-YPIVLLRSMSSISFASQAGNYILIAVMVVVIIYGI-LYNKPSLDLSMLW-----PRKYMEIANMFGVICFSMGVAFVG-------------------LSSRSSMKEPNRFKKALVVSLSIPSLIYITFAFAGVVFYKNAEGGIQDVILANIPRKSAWYIGSAIGLSLVCFLSYPIAVYP-----------------------------ALIACEAWIS---------EQETKTMVTNWKRVLQRLGVVVVTSLLAYFIPSFQMVVSFIGCFTISIVSFILPPLLHMRILPTE-SKASWYVDLLFVILGVGVMAVATTTTVL 380          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A1X7U875_AMPQE (Aa_trans domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U875_AMPQE)

HSP 1 Score: 69.3 bits (168), Expect = 2.930e-9
Identity = 69/260 (26.54%), Postives = 110/260 (42.31%), Query Frame = 1
Query:  328 DGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMS-QLPSNSPAQEPLLL--FITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTT 1098
            DG   F GVA + Y    ++  ++ S  +                  NT  F    K  L+++   Y V G +  L +   GP + +I++  LP   P   PL++   + ++  FTYP+ M PVS I E+ +    F                                   SH +G LS  +   LR  LVL TG+    +PNF +++ L+GS   TL +F+LP +FH  +FG+ ++  +   D +L  IG +  V  T
Sbjct:  210 DGLPFFLGVAIYCYEGAGMVLSLEQSVIKD---------------YRNT--FRSIFKLVLFLVTLLYIVFGVMGYLSF---GPYTQSIITLNLP---PGPFPLIVKSCLCLSLFFTYPMMMFPVSEILEKRISCVSFSP---------------------------------SHFTGYLSGCI---LRILLVLVTGIIVLLIPNFSILMALVGSSCCTLLAFILPAVFHVKLFGKNIARFQFFFDILLILIGLIGAVIGT 410          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A7S3C3_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7S3C3_NEMVE)

HSP 1 Score: 68.6 bits (166), Expect = 4.260e-9
Identity = 70/257 (27.24%), Postives = 109/257 (42.41%), Query Frame = 1
Query:  325 FDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMS-QLPSNSPAQEPLLL--FITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYG--LRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAV 1080
            F G   F G+A + Y    +I  ++AS  +            SA S     +F    K +L+++   Y + G    L +   GP +DNI++  LP   P   PLL+   +  +  FTYP+ M PV +I E+ L                                    ++G+SH          YG  LR  +V+ TG+    +P+F +++ L+GS   TL +F+LP LFH  +F   LS   K  D +L  +G V
Sbjct:  164 FSGLPFFLGIAIYCYEGAGMILALEASCAK------------SARS-----KFRSIFKLTLFLVTMLYILFGVCGYLSF---GPDTDNIITLNLP---PGIFPLLVKSCLCFSLFFTYPVMMFPVVAILEKKLFS----------------------------------DEGKSH--------YYYGTFLRGLMVIITGIVVLGIPDFSMLMALVGSSCCTLLAFILPALFHLQIFKGELSICAKLLDFILILLGVV 355          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: UPI001E674E23 (amino acid transporter AVT3B-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E674E23)

HSP 1 Score: 60.8 bits (146), Expect = 2.090e-6
Identity = 76/321 (23.68%), Postives = 130/321 (40.50%), Query Frame = 1
Query:  142 MCLMYPLTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYGWPPMEEVLSWDALYIPQTFD--GFSTFFGVAAFSY---GATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGP-VSDNIMSQLPSNSPAQE---PLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGA 1077
            M L+ PL C+  L  L++L++ ++ A V+       L L +  W       S +  + P+ F   GF  FF V+ + Y   G  + + E  A H R                            T L +++ S+ V G      Y   GP   D I   LP  +   +    + + + ++  FTYP+ M PV+ + ++      FG ASA   G+                                       +R  LV+ TG+   +VPNF ++++L+G+   TL +F+LP  FH  +F +RL+  ++  D +L  +G+
Sbjct:  169 MLLIPPLYCLTLLRHLNKLAVFSLFAQVSNV-----LALTVVFWFDFSH--SEEVPFTPKEFSMKGFPFFFAVSIYCYEGAGMILSLEESMAEHKRD-----------------KFRSIFICTMTGLTMLYISFGVSG------YASFGPHTMDIITLNLPHGNGTVDFAAMVKICLGVSLFFTYPMMMFPVTHLLDKT-----FGFASAPYRGNM--------------------------------------MRMVLVVMTGLVVNAVPNFAILMSLIGATCCTLLAFILPAAFHLSIFKQRLTKRQRYFDIMLIVLGS 416          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A7S2KHS0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KHS0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.810e-6
Identity = 65/286 (22.73%), Postives = 118/286 (41.26%), Query Frame = 1
Query:  160 LTCIKSLAPLSRLSLPAIVALVAGFAVIIKLGLEMYGWPPMEEV---LSWDALYIPQTFDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSD-NIMSQLPSNSPAQEPLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFH 1005
            L+C+ ++  LS+ S   + A+   FA I   G+  YG    + +   +S  +L IP ++   +++FGVAAFS+G T ++  IQ                   ESMA     + A  + L I    Y ++G    ++Y    PV + + +  LP++      + + +    + + PL + P   I                    D ++G                        G  + A++  +R A+ L   + +T VP+F  VV+ +G   +   SF++PPLF+
Sbjct:  137 LSCLPNVGFLSKFSAFGLTAIFITFAEITAYGVHEYGTNGFQSIGDEVSMGSL-IPSSYSAIASWFGVAAFSFGLTPVVFNIQ-------------------ESMAEPSRMMEATTSGLSIASFVYILVGTGIAILYSPGFPVFEGDALEHLPTDQIQATVVRISMAFMIIVSCPLLVIPCGEIL-------------------DGKFGV-----------------------GTENKAMKIMIRVAICLVCVLVSTLVPDFVHVVSFIGGCFIAFISFIVPPLFY 360          
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Match: A0A7S1XNH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNH0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.290e-5
Identity = 100/390 (25.64%), Postives = 150/390 (38.46%), Query Frame = 1
Query:   10 VVVTLLGAATAYFINANELLRATHFYLNLGWSEETAMYVNTFIYMCLMYPLTC------IKSLAPLSRLSLPAIVALVAGF--AVIIKLGLEMYGWPPMEEVLSWDA-LYIPQTFDGFSTFFGVAAFSYGATIIIPEIQASHTRQDSSAGTSE*LNSAESMANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMSQLPSNSPAQ----EPLL-----LFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDDQRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVCATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVLCFIGAVTCVFTTTTTALGVLR 1125
            +VVT+ G   AY I   +LL  +   L    + E   Y + F  +     +T       +  L P S+  L      V GF  A +  +G    G    +  +  DA   +P +F+ F+ +FGVA F +G T ++  ++    R          +      AN    +GA           Y+++G     I+Q+ G V  N++  LP  +         LL     L     TL ++PL    ++ + E   + AG   +S   G   QR                           EL   +R  L AA+ LF    A  +P FG+VV+LLG FSVT+ SF LPP F   +  E        A       G + CV TT  T   V+ 
Sbjct:  144 LVVTIYGVCVAYMIFCAQLLGDSPMSLGRLMNTEDEFYTHLFNCLACTVAVTPPSLYRDVSFLVPYSKAGLG-----VLGFVLACMFYMGFSQGG----DRNVPLDAHTLLPTSFNDFAAYFGVAVFCFGGTPLMFPVKDGMRRS---------MQHRFKDANCAALMGAALL--------YAIVGCGLGYIFQEKGGVPQNVLQSLPPTTELAGGDLRTLLATCMRLGYLAVTLLSFPLTFVALAGMVEDR-VSAG---SSEPAGHFIQR---------------------------EL---IRLLLLAAVALF----AILIPEFGLVVSLLGCFSVTILSFALPPFFLMRICNEYTYKLSIAATG-----GLIVCVCTTIQTGAAVVE 464          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9590.31237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G755_ECTSI1.890e-23692.04Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JMK9_9PHAE1.880e-13496.89Reverse transcriptase domain-containing protein n=... [more]
A0A4D9D3P3_9STRA9.300e-2630.38Aa_trans domain-containing protein n=2 Tax=Monodop... [more]
A0A7S3HQW5_9STRA3.490e-1927.37Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A196SBX9_BLAHN5.450e-1122.87Transmembrane amino acid transporter protein n=1 T... [more]
A0A1X7U875_AMPQE2.930e-926.54Aa_trans domain-containing protein n=1 Tax=Amphime... [more]
A7S3C3_NEMVE4.260e-927.24Predicted protein n=2 Tax=Nematostella vectensis T... [more]
UPI001E674E232.090e-623.68amino acid transporter AVT3B-like n=1 Tax=Procamba... [more]
A0A7S2KHS0_9STRA2.810e-622.73Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1XNH0_9STRA1.290e-525.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9590contigEcto-sp8_S_contig9590:139..3334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score418.3
Seed ortholog evalue2.2e-114
Seed eggNOG ortholog2880.D7G755
Model size1134
KEGG koko:K14209
KEGG TC2.A.18.8
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.amino acid transmembrane transporter activity
EggNOG OGsCOG0814@1,KOG1304@2759
Cds size672
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9590.31237.1prot_Ecto-sp8_S_contig9590.31237.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9590 2092..3334 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145321.2496452-UTR-Ecto-sp8_S_contig9590:138..3111681145321.2496452-UTR-Ecto-sp8_S_contig9590:138..311Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9590 139..311 +
1681145321.2711024-UTR-Ecto-sp8_S_contig9590:836..9261681145321.2711024-UTR-Ecto-sp8_S_contig9590:836..926Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9590 837..926 +
1681145321.2845714-UTR-Ecto-sp8_S_contig9590:1627..18201681145321.2845714-UTR-Ecto-sp8_S_contig9590:1627..1820Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9590 1628..1820 +
1681145321.2958348-UTR-Ecto-sp8_S_contig9590:2085..20911681145321.2958348-UTR-Ecto-sp8_S_contig9590:2085..2091Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9590 2086..2091 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145321.3109288-CDS-Ecto-sp8_S_contig9590:2091..23131681145321.3109288-CDS-Ecto-sp8_S_contig9590:2091..2313Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9590 2092..2313 +
1681145321.3232772-CDS-Ecto-sp8_S_contig9590:2884..33341681145321.3232772-CDS-Ecto-sp8_S_contig9590:2884..3334Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9590 2885..3334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9590.31237.1

>prot_Ecto-sp8_S_contig9590.31237.1 ID=prot_Ecto-sp8_S_contig9590.31237.1|Name=mRNA_Ecto-sp8_S_contig9590.31237.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=224bp
MANTEEFIGALKTSLWIIWSSYSVLGGVALLIYQQDGPVSDNIMSQLPSN
SPAQEPLLLFITIATLFTYPLAMQPVSSIFEQALIKAGFGQASARVGGDD
QRYGALTAAETGTDPRFPKEEDGESHSSGELSPALRYGLRAALVLFTGVC
ATSVPNFGVVVTLLGSFSVTLGSFVLPPLFHRVVFGERLSSAEKTADEVL
CFIGAVTCVFTTTTTALGVLRGE*
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mRNA from alignment at Ecto-sp8_S_contig9590:139..3334+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9590.31237.1 ID=mRNA_Ecto-sp8_S_contig9590.31237.1|Name=mRNA_Ecto-sp8_S_contig9590.31237.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3196bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9590:139..3334+ (Ectocarpus species8 EcLAC_412)
TTTTCCAGCGTGGTGGTGACACTTTTGGGTGCAGCCACGGCGTACTTCAT CAACGCTAACGAGCTCTTGAGAGCAACTCACTTTTACCTCAACCTGGGAT GGTCGGAGGAGACGGCTATGTACGTGAACACGTTCATCTACATGTGCCTC ATGTACCCGCTCACGTGCATCAAGTGAGTACCTGTGCCTTGAACTTGACC CTGTGCGGGAACTGAAAACAAGAGTCGTGTTGGCACAAAGAATGCCACAG TAGAGCACGAGTCCTAGATAAGGACGTGGTGTTTGCAATGAAGTCTCGAT GCTTCAGACAAGGAACGAAACGATCACGCCATGATCATATTGCCTGGCAC ACTCGACCAGCGTCTTCCGCAACATTTTTTTGTTGTCTGCGAGCGTGTGA CGGGCACGCAACCGGCGTCAAGTTCCTGTTTCGGTCACGGTGTTTGTTGC AGGGGTGCACCATCCACTGCCACATCCTGCGGGACTCCGGAACACAGGCT ACACCGAGGGACGAAATTAACTCGCACCACACCACGCATCTCTCACGCCT GCTGTGACGCCATGTGTTTCTTCCATGCAAAGAAACTTCAAGGTGTTCCG AAATGTAAATGCGTGTATGTATAGTGCGCAAGCTGTCCGGGGGTAATTTC CTCACGCTTGTCTTTCTCCCGCCTGGCTGCGTTTCTTTCCTCCGTCAGAT CCTTGGCGCCTCTGTCGAGGCTATCGTTGCCGGCTATCGTAGCCCTTGTC GCCGGGTTTGCCGTCATCATCAAGCTGGGCTTGGAGATGTGAGCAAGGCG ATTACCGGGTTGCGTAGACTAGGCTGCCGATGGATGGATGAACTAAGTCT CACGGCTGTGCCGTGGGGTACCTCATACTGCGTGGCGGGCCTGGCGTGGG ATTACCGTACATATGACTTCAAGCGCTTTCTCGTGGCAGACCGCATCTGA CCCTGGCAAGGATTAGCACCCGCTGGCGTGTTTTCCACCTACGGTATTCC CACGCCATAGTCTGAGACTTTTTGGTAGCAATTCGCAGACGCGTTTCAGG GTTGCCTTGGAGGCGGTCGATACCGATTGGTTCGGCCTTTTGGGTTTCAC GTTTACAGCCGGCATCATTGTGTGGGAGACCAATGAGTAGTCTGGTTTGA CGCGGGTTCGAAGCACTCGGAGGGTGACGGGCTGGGAAAGGTCGCTCCGT ATTTGACACTGCGAGACGCTCGGCCGTGCGCAGCCCCAGCAGAAAGCAAC TCGTTGGCGTTGTTTCCATGGACCAGAGTTAGCTTTGTCGGAGAGAACAA ACAACAACGGACCCCCCCCCATTGTTTAACCTGGACGATCGCTGCCGGTC CCGCTGTACTCGAACGAAATCTTGCATGCATGTGTCACTGACGGTAATGT CAACCACAACAACAACAACCACAATAACAACAACAACAACAACAACAACA ACATTGATCACCACCACCTTGCATGGCGTGTTCGTGTAGGTACGGCTGGC CGCCGATGGAGGAGGTCCTCTCGTGGGACGCTTTGTACATCCCCCAAACT TTCGACGGTTTCAGCACGTTCTTCGGAGTGGCGGCGTTCTCCTACGGGGC AACGATCATCATCCCCGAAATCCAGGCAAGCCACACACGACAGGATTCAT CAGCTGGCACCTCCGAATAGCTAAACAGTGCTGTAGCCCTGATTCCGTTA ATGACATCGCCGTTTTTCCGACCAAGGCAACAATGCCTGGTGTTCGTGAT ATGATAGTAGTAGCACTTCAGTCTGGTTTCGGTGGCATGGTATCATAGGT GGGTACGTGCCTCCGGCGGCAGGCGGGCGACCCCCCCCCCGGCGCCCAGC CACCCCTTCCTCACCCAGACACCGTCGCTGCCCCGACCGTGAAACAACGC TAATCGTGTTGGTGCCTACCCTTGCGGCGAATGAACCCCTCACTCAGGAA TCGATGGCGAACACCGAAGAGTTCATCGGCGCCCTCAAGACCTCCCTCTG GATCATCTGGAGTTCCTACTCCGTGCTCGGTGGGGTGGCTCTGCTCATCT ACCAGCAGGACGGCCCCGTCTCCGACAACATCATGAGCCAGCTGCCGAGC AACTCTCCCGCCCAAGAGCCTCTTCTTCTTTTCATCACGATAGCGACGCT CTTCACGTACCCTTTGGCGATGCAGGTTGGTTTCGGTCGCGACCCGGCCC TCCTGTAGCCGTACGTGTACTGGATGGGCTGTTTTCGTGTCTCGATTCAC ACGTGCAAAGGTTACCCTGCTTCTTGCTGTCGCTTTCCAAAGCATCATCC ATATTGTACTGGACGGACTGTTGTTGTTGTTGTGGTTGTTGTTGTTGTTG TCTTCACATAAACAAAACGTTCCGTTCTCCGCTCAGTACCTTCGAATGTC CGTACTGGTCCAACCAACGCGGACGGACGACTTCCGTGGTCACAAGCCTA ATTCACACGGGGTAAGAAGGCTCTTGCTGTCGCTTTTCCAACGCAAGAAC TTGTACTGGATGGACTGTTCTGTGTCTTGATTCACACGTGTTCAGGCCAC CCACCCTCTTTCTGTCACGTTTCCGACGAAAGGGCTCCAATCCCCACAGC AGTCACACCAATATAAAACACCTCCGCGATCGCCAACATGTTTTTCCCGT TGCGGAGAGAGTCTCTGACAGCAGTGCGTTCACCTATTGCCCTCTCTCTC CCCCCCTCCTTTTCCCCAACAAACCTGCGCTGCTGTGCCGCAACAGCCTG TCTCCTCGATCTTCGAGCAGGCCCTCATCAAGGCAGGCTTCGGTCAGGCT TCCGCCCGGGTCGGCGGCGATGACCAGAGGTACGGCGCCCTTACCGCGGC GGAGACAGGAACGGACCCGCGGTTCCCCAAGGAGGAGGACGGAGAGAGCC ACTCGTCGGGCGAGCTATCTCCGGCGCTGAGGTACGGGCTCCGCGCCGCC CTCGTCCTCTTCACCGGGGTCTGCGCGACGAGCGTGCCCAACTTCGGCGT CGTCGTCACCCTCCTGGGGTCGTTCTCCGTGACCCTCGGGTCCTTCGTCC TGCCGCCCCTGTTCCACCGCGTCGTGTTCGGGGAGAGGCTGTCTAGCGCC GAGAAGACCGCCGATGAGGTGCTCTGCTTCATCGGCGCCGTGACCTGCGT GTTCACGACTACTACCACCGCGCTGGGGGTGCTCCGGGGCGAGTAA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9590:139..3334+

>mRNA_Ecto-sp8_S_contig9590.31237.1 ID=mRNA_Ecto-sp8_S_contig9590.31237.1|Name=mRNA_Ecto-sp8_S_contig9590.31237.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9590:139..3334+ (Ectocarpus species8 EcLAC_412)
ATGGCGAACACCGAAGAGTTCATCGGCGCCCTCAAGACCTCCCTCTGGAT
CATCTGGAGTTCCTACTCCGTGCTCGGTGGGGTGGCTCTGCTCATCTACC
AGCAGGACGGCCCCGTCTCCGACAACATCATGAGCCAGCTGCCGAGCAAC
TCTCCCGCCCAAGAGCCTCTTCTTCTTTTCATCACGATAGCGACGCTCTT
CACGTACCCTTTGGCGATGCAGCCTGTCTCCTCGATCTTCGAGCAGGCCC
TCATCAAGGCAGGCTTCGGTCAGGCTTCCGCCCGGGTCGGCGGCGATGAC
CAGAGGTACGGCGCCCTTACCGCGGCGGAGACAGGAACGGACCCGCGGTT
CCCCAAGGAGGAGGACGGAGAGAGCCACTCGTCGGGCGAGCTATCTCCGG
CGCTGAGGTACGGGCTCCGCGCCGCCCTCGTCCTCTTCACCGGGGTCTGC
GCGACGAGCGTGCCCAACTTCGGCGTCGTCGTCACCCTCCTGGGGTCGTT
CTCCGTGACCCTCGGGTCCTTCGTCCTGCCGCCCCTGTTCCACCGCGTCG
TGTTCGGGGAGAGGCTGTCTAGCGCCGAGAAGACCGCCGATGAGGTGCTC
TGCTTCATCGGCGCCGTGACCTGCGTGTTCACGACTACTACCACCGCGCT
GGGGGTGCTCCGGGGCGAGTAA
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