mRNA_Ecto-sp8_S_contig95765.31212.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: D8LRP0_ECTSI (Amidohydro-rel domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP0_ECTSI) HSP 1 Score: 124 bits (311), Expect = 5.320e-33 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKG--SKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
ELGAVVWMHPCRPQSYADYD+YKG SKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPG+
Sbjct: 154 ELGAVVWMHPCRPQSYADYDSYKGEGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGL 213
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A835Z1K2_9STRA (Amidohydro-rel domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K2_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.900e-26 Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAY----KGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYP 168
EL VW+HPCRPQ+YADYD Y KGS HQIWN+FGWIYDTSVAMVHIAL GVFRRYP
Sbjct: 159 ELDVAVWIHPCRPQNYADYDQYQREGKGSLHQIWNSFGWIYDTSVAMVHIALGGVFRRYP 218
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A7S3UR03_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR03_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 2.590e-24 Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 1
Query: 7 GAVVWMHPCRPQSYADYDAYK--GSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
GA VW+HPCRPQ DYDAY+ GSK+QIWNT GWIYDTSVAMVHIA AGVF+R+P V
Sbjct: 3 GAPVWLHPCRPQFVPDYDAYRAGGSKYQIWNTLGWIYDTSVAMVHIAQAGVFQRHPDV 60
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: W7TWC5_9STRA (Amidohydrolase 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWC5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.260e-21 Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKG---SKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
E G VW+HP RPQ Y DY+AY+G S HQIWNT GW+YDTSVAMVH+ +AGVF+RYP +
Sbjct: 195 EDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNL 255
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A3D3BJX0_9GAMM (Amidohydrolase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D3BJX0_9GAMM) HSP 1 Score: 72.0 bits (175), Expect = 3.550e-14 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYP 168
E G +WMHP R Q +ADY + S+++IW TFGW Y+TSVAM + +G+F RYP
Sbjct: 7 ESGKPIWMHPARGQGFADYQSEDRSEYEIWWTFGWPYETSVAMARLVFSGMFDRYP 62
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: UPI001685C528 (amidohydrolase family protein n=1 Tax=Anabaena azotica TaxID=197653 RepID=UPI001685C528) HSP 1 Score: 72.4 bits (176), Expect = 1.390e-13 Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
ELG +W+HPCRP +Y DY S++ +W T GW+ DTS MV + +G+F+RYP +
Sbjct: 156 ELGVPLWLHPCRPGNYPDYIDENKSEYLLWQTLGWLMDTSSVMVRLVFSGIFQRYPQI 213
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A3P4B6A3_9BURK (Amidohydrolase n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4B6A3_9BURK) HSP 1 Score: 70.9 bits (172), Expect = 5.070e-13 Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
EL +W+HP R S+ADY A S ++IW GW ++TSVAM HIAL+G+F R+PG+
Sbjct: 152 ELDRPIWLHPDREASHADYTAESKSHYEIWFAIGWPHETSVAMAHIALSGLFDRHPGL 209
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A2E4KV02_9GAMM (Amidohydrolase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E4KV02_9GAMM) HSP 1 Score: 69.3 bits (168), Expect = 1.830e-12 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
E G +WMHP R Q + DY + S+++IW TFGW Y+TSVAM + +GV RYP +
Sbjct: 154 ESGKPIWMHPARGQDFPDYQSEDRSEYEIWWTFGWPYETSVAMARLVFSGVLDRYPNL 211
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A1E3ZFJ2_9BORD (Amidohydro-rel domain-containing protein n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A1E3ZFJ2_9BORD) HSP 1 Score: 68.9 bits (167), Expect = 2.530e-12 Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 4 LGAVVWMHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGV 174
L +W+HP R S+ADY A S ++IW GW ++TSVAM HIAL+G+F +YPG+
Sbjct: 153 LDLPIWLHPEREASHADYTAESRSHYEIWFALGWPHETSVAMAHIALSGLFDQYPGL 209
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Match: A0A536X5P1_9PROT (Amidohydrolase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X5P1_9PROT) HSP 1 Score: 67.4 bits (163), Expect = 5.020e-12 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 1 ELGAVVWMHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYP 168
E+ +WMHP R +ADY + S ++IW TFGW Y+TSVAM HI G+F ++P
Sbjct: 152 EIDLPIWMHPARGADFADYKDERRSHYEIWWTFGWPYETSVAMAHIVFEGLFDKHP 207 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95765.31212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig95765.31212.1 >prot_Ecto-sp8_S_contig95765.31212.1 ID=prot_Ecto-sp8_S_contig95765.31212.1|Name=mRNA_Ecto-sp8_S_contig95765.31212.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=51bp MHPCRPQSYADYDAYKGSKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGback to top mRNA from alignment at Ecto-sp8_S_contig95765:18..447+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig95765.31212.1 ID=mRNA_Ecto-sp8_S_contig95765.31212.1|Name=mRNA_Ecto-sp8_S_contig95765.31212.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=430bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95765:18..447+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig95765:18..447+ >mRNA_Ecto-sp8_S_contig95765.31212.1 ID=mRNA_Ecto-sp8_S_contig95765.31212.1|Name=mRNA_Ecto-sp8_S_contig95765.31212.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=153bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95765:18..447+ (Ectocarpus species8 EcLAC_412)back to top |