mRNA_Ecto-sp8_S_contig9572.31204.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9572.31204.1
Unique NamemRNA_Ecto-sp8_S_contig9572.31204.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: A0A6H5JVJ0_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ0_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 1.130e-115
Identity = 186/212 (87.74%), Postives = 196/212 (92.45%), Query Frame = 1 
Query:    1 MKQVTEATRRSWILLVLVLTARCQACEAGSAAGATSWRRRGVLNTASSCASDGRHSNRCCRIDEAARSVVGLRGGSGASIGGSTSAPREGGRLHGGDANLSAGGNVRPDGVKENQEHKSGLVEEAKWLDRAESGVQPQTAPAYQLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLCE 636
            MK VTEATRR WIL +LVLTARC+ACEAGSAAG  S  R+GVLNTAS CA DGR+ NRCCRIDEAARSV+GLRGGSGASIGGSTSAPR GGRLHGGDA+LSAGGNV PD VKENQ+H+ GLVEEAKWLD AESGVQP+TAPAYQLVLR CFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTY+IGKSGTAFIKWGQWSSTRPDMFPEGLCE
Sbjct:    1 MKLVTEATRRGWILFLLVLTARCRACEAGSAAGLPS-SRKGVLNTAS-CARDGRYINRCCRIDEAARSVLGLRGGSGASIGGSTSAPR-GGRLHGGDADLSAGGNVSPDEVKENQKHEGGLVEEAKWLDSAESGVQPKTAPAYQLVLRSCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYSIGKSGTAFIKWGQWSSTRPDMFPEGLCE 209
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: D8LU76_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU76_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.310e-34
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1 
Query:  412 QTAPAYQ-LVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLCE 636
            + AP +Q LVLRG FLLLVFLFPLLSAGLAYLSSWFREKVWYRALTY+IGKSGTAFIKWGQWSSTRPDMFPEGLCE
Sbjct:   19 EEAPVHQELVLRGGFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYSIGKSGTAFIKWGQWSSTRPDMFPEGLCE 94
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: A0A836CGV8_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.530e-16
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 1 
Query:  475 PLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLC 633
            P+L + LA LS+WFR++VWY  L   I  SG AFIKWGQWSSTRPDMFPE LC
Sbjct:    3 PVLLSWLALLSTWFRDRVWYPLLVRCIASSGAAFIKWGQWSSTRPDMFPEALC 55
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: R1E857_EMIHU (Putative ABC1 family protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E857_EMIHU)

HSP 1 Score: 79.3 bits (194), Expect = 1.130e-13
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 1 
Query:  388 RAESGVQPQTAPAY-QLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLC 633
            R E+ +  +  P +  LV R   L L+F  P+L + LA+L  +FR +VWYR LT ++ ++GTAFIKWGQW+S RPD+FP  +C
Sbjct:   77 REEAALVSEAPPGFASLVGRAVVLALIFSPPMLLSWLAWLWPFFRNRVWYRMLTASLARAGTAFIKWGQWASCRPDVFPTAMC 159
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: A0A7S0EN32_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EN32_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 1.450e-13
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:  394 ESGVQPQTAPA-YQLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLC 633
            E+G+     P  +QL  R   LLL+FL  +L+A LA     FRE+VW+  +  A+  +GTAFIKWGQW+STRPD+FPE LC
Sbjct:   77 EAGLVDSKPPGPWQLFTRAIVLLLIFLPTVLTALLARYWRTFRERVWFPLVKTALASAGTAFIKWGQWASTRPDVFPERLC 157
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: W7U029_9STRA (AarF domain-containing protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U029_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 8.230e-13
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1 
Query:  427 YQLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLC 633
            + LV RG +LL +F   +L+A LA +S  FR   WYR +T AI ++G AFIKWGQW+S RPD+FPE  C
Sbjct:  149 FALVRRGLYLLYLFSAAILTALLALVSERFRSPYWYRMITCAISQAGAAFIKWGQWASARPDIFPEEFC 217
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: L1K0R0_GUITC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0R0_GUITC)

HSP 1 Score: 76.3 bits (186), Expect = 1.250e-12
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 1 
Query:  430 QLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLCE 636
            +L+LR  +L  ++  P +++ LA L   FR+ VWY+ LT ++G SG AFIKWGQW+S RPD+FP  LC+
Sbjct:    1 KLLLRAIYLSFIYFLPFVTSPLALLVPSFRDHVWYKFLTMSLGHSGAAFIKWGQWASVRPDIFPLKLCD 69
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: A0A7S3Q8H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8H1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.320e-12
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:  430 QLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLC 633
            +LVLRG  L+  F    L+ GLA +S  FREKVWY  ++  + K G AFIKWGQW+STR DMF +G C
Sbjct:  117 KLVLRGAVLIFNFTPVTLTCGLAAISKTFREKVWYGVVSRCLAKGGPAFIKWGQWASTRSDMFSDGFC 184
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: A0A7S2MI66_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MI66_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.550e-12
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  439 LRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLCE 636
            LR  +L +VF    L+AG+AY    +R  VWY  L +AI + G A+IKW QW+STRPDMFPEGLCE
Sbjct:   73 LRALYLAIVFGPIPLTAGIAYFIGPYRRLVWYPLLCWAIAQCGAAWIKWAQWASTRPDMFPEGLCE 138
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Match: A0A1Z5K7V6_FISSO (AarF domain-containing kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7V6_FISSO)

HSP 1 Score: 73.9 bits (180), Expect = 9.320e-12
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:  400 GVQPQTAPA-----YQLVLRGCFLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSSTRPDMFPEGLCE 636
            G+ PQ         ++L++R   L + F    L+ GLA  S+ FRE  W+  LT +I  SG A+IKWGQWSSTR DMFPE LC+
Sbjct:  186 GISPQAEEKRSIKNWELIMRVLKLSITFAPCYLTVGLAVFSTTFRENTWFSWLTSSIASSGAAWIKWGQWSSTRSDMFPEALCD 269
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9572.31204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVJ0_9PHAE1.130e-11587.74ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU76_ECTSI1.310e-3490.79ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CGV8_9STRA6.530e-1667.92ABC1 family-domain-containing protein n=1 Tax=Trib... [more]
R1E857_EMIHU1.130e-1346.99Putative ABC1 family protein n=2 Tax=Emiliania hux... [more]
A0A7S0EN32_9EUKA1.450e-1350.62Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
W7U029_9STRA8.230e-1353.62AarF domain-containing protein kinase n=2 Tax=Mono... [more]
L1K0R0_GUITC1.250e-1249.28Protein kinase domain-containing protein (Fragment... [more]
A0A7S3Q8H1_9STRA1.320e-1254.41Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S2MI66_9STRA2.550e-1256.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z5K7V6_FISSO9.320e-1246.43AarF domain-containing kinase n=2 Tax=Fistulifera ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9572contigEcto-sp8_S_contig9572:3694..7178 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score139.8
Seed ortholog evalue1.5e-30
Seed eggNOG ortholog2880.D8LU76
Model size636
KEGG koko:K08869
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
Exons4
EggNOG free text desc.kinase activity
EggNOG OGsCOG0661@1,KOG1236@2759
Cds size636
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145319.0131638-CDS-Ecto-sp8_S_contig9572:3693..39581681145319.0131638-CDS-Ecto-sp8_S_contig9572:3693..3958Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9572 3694..3958 +
1681145319.0246933-CDS-Ecto-sp8_S_contig9572:4791..49501681145319.0246933-CDS-Ecto-sp8_S_contig9572:4791..4950Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9572 4792..4950 +
1681145319.0350547-CDS-Ecto-sp8_S_contig9572:5759..58601681145319.0350547-CDS-Ecto-sp8_S_contig9572:5759..5860Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9572 5760..5860 +
1681145319.047041-CDS-Ecto-sp8_S_contig9572:7067..71781681145319.047041-CDS-Ecto-sp8_S_contig9572:7067..7178Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9572 7068..7178 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9572.31204.1prot_Ecto-sp8_S_contig9572.31204.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9572 3694..7178 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9572.31204.1

>prot_Ecto-sp8_S_contig9572.31204.1 ID=prot_Ecto-sp8_S_contig9572.31204.1|Name=mRNA_Ecto-sp8_S_contig9572.31204.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=212bp
MKQVTEATRRSWILLVLVLTARCQACEAGSAAGATSWRRRGVLNTASSCA
SDGRHSNRCCRIDEAARSVVGLRGGSGASIGGSTSAPREGGRLHGGDANL
SAGGNVRPDGVKENQEHKSGLVEEAKWLDRAESGVQPQTAPAYQLVLRGC
FLLLVFLFPLLSAGLAYLSSWFREKVWYRALTYAIGKSGTAFIKWGQWSS
TRPDMFPEGLCE
back to top

mRNA from alignment at Ecto-sp8_S_contig9572:3694..7178+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9572.31204.1 ID=mRNA_Ecto-sp8_S_contig9572.31204.1|Name=mRNA_Ecto-sp8_S_contig9572.31204.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3485bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9572:3694..7178+ (Ectocarpus species8 EcLAC_412)
ATGAAACAGGTGACGGAAGCAACGAGGAGGAGCTGGATTCTACTTGTGTT
GGTCCTAACCGCGCGTTGCCAGGCTTGCGAAGCTGGCTCGGCAGCGGGGG
CTACCAGCTGGCGAAGGAGGGGGGTCCTAAATACCGCATCATCATGCGCT
AGCGATGGAAGGCACAGCAACCGATGCTGCCGAATAGATGAAGCTGCCAG
GAGTGTTGTTGGGCTGCGAGGAGGCTCGGGAGCGAGCATTGGAGGAAGCA
CCAGTGCACCAAGAGGTGTGGCACATGACGGACATGGTAACATGATCGCA
CGATATTGTACCTGTAACAAGGGGTAGCATATTGAACAGCCGGCGGGCGA
GATAGCACTGACCGGACCTCCAGTGATGCGACTGCCCGTATCATATGCAT
GTACTGTACACGGCTGTAGCACACAACAGTGAGAGAGAGTACCTGCCGCG
TTATGCCCTGTTCAGGAGAAGGAAAATTACAGGTCGGTTGCGTGTTCTGG
GCACCTCATCTGTATCCAGCACAGATCCAGCAGTATCTCCGCCGCCTGCC
CGCGTCCTGTAAGCAGTCTTCTCTCTGGCAAGATGTGCATACACTGCTGT
AGACTGTTCCATTTCAACCAAGGGGCGATTCTTGGCCGCGCCTCTCTTAT
TTCTTATTTCTTACCATATACGGTTATGTTTCTGTTTCGTGCTTCGACGT
ACCACGTATATGTATGTAGCTGCTTGCATTCAACTCCAACGCTTGTTTTT
GTCGTTCACGCTTTTACATGTGACATGGCATCTGCAATGCAACATGTTTG
CGCTACAATGTACCCTTCTATTTCTTCTACATGGATAAGCGGCGAGACGC
TGTATCTGGACCTTGGGTGCTTTGGTTGGCTGTACCCTTTTTTGGCGTCA
ACTTCTGACGGCGGAAACTCGTTTCTTTGCCCGACTGTGCAAGAGACGGA
GGAGTTCTACCGGATAGCGGTTGAAAAGTATCCACAGCGCGAAACAGCAA
GAACAACCCCAGGCAATACATAGTACCGTCTTACCTTTCAAAACTGGTGC
AAACAACAGCAACAACAAACCTCTACCATCTGCATGCGTTTTTGGAAGAA
GGCGGCCGTCTGCACGGTGGAGACGCCAACCTCAGCGCTGGCGGTAATGT
TCGTCCTGATGGAGTGAAGGAGAACCAAGAGCACAAGAGTGGACTGGTAG
AAGAGGCGAAATGGCTTGACCGCGCCGAGTCAGGCGTGCAACCCCAAACT
GCCCCCGGTGAGAGGGGATGTTATTTCGCGTGCGGACGTTTCCCGTGTAT
CCTCAGTTGTGTCGTGGTGATGGGGACTACGACAAAGTGTCAGCCGCAGA
GCCTTGCCTCATTGTATGGAAGGCGAACGTTGCACTACGAGCACGTCCTA
CCTAGGTTTTGATTCGATTTCCAGTCGATTGAAGTCATCGCCTGCAGACC
CTACCTTTCTTCGGCTGGTCAACCCGATGTTTTCACTACGCGATCCCCTG
TCGCAAGCTGGGTTCGTGGGTTCGTGGATTTCTCACCCGAGTATCGCCAA
GAAGACTGGGCGAGTGGGAGTATAGGCATGGGCAACTGTTAATTTGGTAG
TGCAGGAATATGTTGAACATACCAGCTGTGCTCTCGACGCCGTCTCGTTA
GCTCCCCCGCGTCAAGGGTGTGAATTTCTTGCTGATAATATAGACCTTAG
CCGGCTCGCTTTCGTGAAGGTTTCTTTATGTTTGCACTGCTATGCCGCAG
GGCATTCGTGTGGTACCACTTGCCTGGCGCCCCCCGTCCGGGTTGGCACT
TACGTGTGCGGTGCCTCCTGTTCTTTTGCAATATTCCTGCGCTGGTCGGT
AGAGGTAGGAGTGTCACACCCGATGCCTAAATCGAAAGCGCACGTACTTT
CAACATCGTAGGATAACTGAGCGCCTCCCAGAGGCCTTACCCTAGCTTGG
TTCCCCAAGCGAACCTAACATGAAATCGAACGAGCCCGGCTAGAACGAGG
AGTGATCGAAGATGTTGAGGCTAACAACGATCGTTACCCATCCATGACGC
GCGTATCCGCATGTAGCGTACCAGCTGGTGTTGCGGGGTTGCTTCTTGCT
GCTGGTGTTTCTCTTCCCCCTGCTGAGCGCGGGCCTTGCCTATCTCTCCT
CTTGGTTCAGAGAAAAGGTGCGTGGCTTTGCATTCTTTTGAGGCGTTGTT
CTGTACTCCTCCCTGCGGTCGCTACATGCTTTCGATTAATCCAACTGTTG
GGTGCTGCTGTAGTTCGATCGATCTGTTTTCATGGGTTCCATCCCTTGAG
CCCCATCTTGAAGCGGTTGTGCCGTCTGTGGTTGTGAACGCCTTGCGTGC
AGTCCGTCACAACAAGAAGACTAGCTTCCAGGATTCCAGTTGCGGGTAGG
GGGGGTTGTCTTCGGGCGGGTGGACTCCGAGCGGACGAGGTCTTGGAGTA
GGTACTATTGGCCGTGAAATTCGGATAACCGAATACGCCTTTGGGAAGCT
TGTGTTCGGCCTGGTCGCATGTGAGTGTTCAAGTGCGAAGCCTGGACGAT
ACGCGCCAGTAGAGGGCAGCTGCCAGTCCCACCTCATGCAACCTCTACGC
GGAGAACAGGCCTACAGTACTGCAACAGCCGTGCGCGTTTTTGTATTGGC
AGCCCCCTTTCGCACGCGGCTGTCGTGACAAGGTTACTGTCCCAAAACAT
GTGGGCCCTTAGGAATGACAAATTCAGAGGAGGATATGCCATCGAAATTG
GTAGGTATGCGACGCACATCTCTCAACTGTACCTTGCAGCATACTTCAAG
CCTGGAAACCATAATATCGACGAAAGGCACTGCTAGTTCTGTCAAGGTGT
CTGCATTCAAACCCTTTTGTACTCGTTTTACTGCAACAATGCATCGCCTG
CGCGCCCGGTTGTATGGCGATTCGTTCCGTTTCTTCGTGTAGTGGTGAAG
TAGACGGCGGTGGCCTAAACTTGACGAGAACGCACGACGCGACAAGTTCG
GTAGCGGTAACCGATTGTTTGTCCAATAGGTTTGCTTTTGTGGGCATTCG
CGTCGGGGGGCTATTCGGAGCATTTTTGCTTTCGACGTTGTCTCAGACAA
CAAGACACGAAAATCGTTGCAAACCCGTCTCACGGCACAAAGCATTCCAC
AAATCGATCACAGCACTCAATCCTAAGGGCAGTGTGGTTTGTTGGTAAGT
AAGCTTGGGAGCTTCATGGTGAGGTTCATGAACAAATGAACGCCAACACG
GTCCAGGCTTGGTCCAGCCTAGCCTAGCAACAGCTGCTGATGTGCCGGTG
GGACGCCATGCTGCAGCTACGTACCGTCGCACAACCATATGTCACCGAAC
GCCGAAACACCCCATGACGAACAGGTGTGGTACCGAGCTTTGACGTATGC
CATCGGGAAGAGCGGGACGGCCTTCATCAAGTGGGGCCAGTGGAGCAGCA
CACGGCCGGACATGTTCCCTGAGGGGCTGTGCGAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9572:3694..7178+

>mRNA_Ecto-sp8_S_contig9572.31204.1 ID=mRNA_Ecto-sp8_S_contig9572.31204.1|Name=mRNA_Ecto-sp8_S_contig9572.31204.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9572:3694..7178+ (Ectocarpus species8 EcLAC_412)
ATGAAACAGGTGACGGAAGCAACGAGGAGGAGCTGGATTCTACTTGTGTT
GGTCCTAACCGCGCGTTGCCAGGCTTGCGAAGCTGGCTCGGCAGCGGGGG
CTACCAGCTGGCGAAGGAGGGGGGTCCTAAATACCGCATCATCATGCGCT
AGCGATGGAAGGCACAGCAACCGATGCTGCCGAATAGATGAAGCTGCCAG
GAGTGTTGTTGGGCTGCGAGGAGGCTCGGGAGCGAGCATTGGAGGAAGCA
CCAGTGCACCAAGAGAAGGCGGCCGTCTGCACGGTGGAGACGCCAACCTC
AGCGCTGGCGGTAATGTTCGTCCTGATGGAGTGAAGGAGAACCAAGAGCA
CAAGAGTGGACTGGTAGAAGAGGCGAAATGGCTTGACCGCGCCGAGTCAG
GCGTGCAACCCCAAACTGCCCCCGCGTACCAGCTGGTGTTGCGGGGTTGC
TTCTTGCTGCTGGTGTTTCTCTTCCCCCTGCTGAGCGCGGGCCTTGCCTA
TCTCTCCTCTTGGTTCAGAGAAAAGGTGTGGTACCGAGCTTTGACGTATG
CCATCGGGAAGAGCGGGACGGCCTTCATCAAGTGGGGCCAGTGGAGCAGC
ACACGGCCGGACATGTTCCCTGAGGGGCTGTGCGAA
back to top