mRNA_Ecto-sp8_S_contig9572.31203.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 537 bits (1383), Expect = 5.970e-182 Identity = 263/274 (95.99%), Postives = 267/274 (97.45%), Query Frame = 2
Query: 2 EDSCWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPTESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 823
EDSCWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLR+HK RSCKWLTIFRHPIARLLSAY HCL APKDPVCPPTESTGL VFAELWGNFAMRQFAL +VSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVG+AQELETTMVLFSKALSMEGLDWSSSWATLGINEE KQDSEYDIAESEPFRQ LENPRIVSALRLDMSLYEHA+HVFKDQVAQFGIE
Sbjct: 270 EDSCWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPTESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 517 bits (1332), Expect = 1.530e-178 Identity = 254/265 (95.85%), Postives = 259/265 (97.74%), Query Frame = 2
Query: 29 MDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPTESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 823
MDKSGASGARRVATE+WRKDELVFDTVQWRRGDGFAADVMAS WKLLHGGCVESLR+HKGRSCKW+TIFRHPIARLLSAYDHCLGAPKDPVCPPTESTGLA FAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVL S LEPVKGLLSTQYAAVG+AQEL+TTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDI ESEPFRQ LENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE
Sbjct: 1 MDKSGASGARRVATEQWRKDELVFDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPTESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 177 bits (450), Expect = 7.850e-46 Identity = 104/306 (33.99%), Postives = 154/306 (50.33%), Query Frame = 2
Query: 2 EDSCWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMAS-----HWKLLHGGCVESLR-------SHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM----------WYLVKEYLA-RGGIAEDEV-----LESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLG-INEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
E+ CWIF H+ K+G + +R+ + W + +D+ QW++G G+A V AS W GG +E+LR + C+W T+FRHP++RL+SAY +C P D +C + + L FA WGNFA+RQFAL VS VK++ + WY++K +L R G+A+D LE M PV LL YA VG+ ++ T+ LF AL M G+ W + G +N D+ + + + +Q L +P IV L LD+ LY AV +F Q +GI
Sbjct: 85 ENRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNV----DTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.330e-39 Identity = 94/293 (32.08%), Postives = 146/293 (49.83%), Query Frame = 2
Query: 11 CWIFMHMDKSGASGARRVA----TERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAVFAELWGNFAMRQFALAAVSPS------AVKEWAAQRQARTGTSM--WYLVKEYLAR-------GGIAEDEVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
CW+F HM+KSG R++ TE+ L FD ++W G +A + + +GG E LR + R CKW T+FRHP++R++SAY +C A D +C L FAE WGN+ +RQFALA++ V E+ Q + + WY K YL G + L L + LST+YAAVG+ +E + +M LF++ L++ DW + G +++ S+++ A + +P + + LD+ LY+HA+ V + QVA GI
Sbjct: 52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTAL-FDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSG--KKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 154 bits (389), Expect = 2.360e-38 Identity = 106/307 (34.53%), Postives = 155/307 (50.49%), Query Frame = 2
Query: 29 MDKSGASGARRVATERWRKDELV----FDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKG---RSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPT------ESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM------------WYLVKEYL------------ARG----GIAED--EVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
M+K+G S + + W K + V +D+ QW G FA D + L+ G E LR G R CKW TIFRHPI RL+SAY +C P+D +C + T L FAE WG+F +RQFALA V P +E A + T + WY +K YL +RG G A + +L+PV+ LL+ +YAAVGV ++ ET+++LF++AL M G DW ++ ++G D + E+E + +PR+ L LD+ LY++AV V QV ++G+
Sbjct: 1 MNKAGGSTVKYMLAP-WTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLP---EELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKK---NSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 157 bits (398), Expect = 4.090e-38 Identity = 96/301 (31.89%), Postives = 145/301 (48.17%), Query Frame = 2
Query: 11 CWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAAD-----VMASHWKLLHGGCVESLRSHK--GRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLAR-----GGI---------------AEDEVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
CW+FMH+ K G S + + +RW ++D+++W+ GD F+A + W ++ GG E+LR + G C++ T+FRHPIAR++SAY +C D C + L FA+ WGNFA+RQFAL V V+E Y +K YL R GG+ D L +L+P L+ Y AVG+ ++ TT+ LF L M ++W +A G + D + + +I E +Q + + +RLD+ LYEHAV VF Q G+
Sbjct: 177 CWVFMHLQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE--------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEI---ETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 155 bits (393), Expect = 1.940e-37 Identity = 97/310 (31.29%), Postives = 151/310 (48.71%), Query Frame = 2
Query: 5 DSCWIFMHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAAD-----VMASHWKLLHGGCVESLRSHK--GRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQART-------GTSMWYLVKEYLARG--------GIAEDEVLE------------SMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
D CW+FMH+ K G S + + + ++D+ QW+ GD +A+ W ++ GG E+LR + C++ T+FRHPIAR++SAY +C D C + L FA+ WGNFA+RQFAL V V+E+ +A+ + WY +K YL R G +E +E +L+P L+ + Y AVG+ ++ TT+ LF AL + G+ W + +A G D ++ ESE +Q + + +RLD+ LYEHAV VF +Q +G+
Sbjct: 154 DQCWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRL---ESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 129 bits (323), Expect = 3.180e-29 Identity = 85/289 (29.41%), Postives = 143/289 (49.48%), Query Frame = 2
Query: 8 SCWIFMHMDKSGASGARRVATERWRKDELV---FDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKG-RSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAVFAELWGNFAMRQFALA-------AVSPSAVKEWAAQR---QARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPFRQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
+CW++ M+K+G + RR+ + F Q+ GD ++ L+ G E LR + CKW T+ RHPIARL+SA+++C P D +C E + FAE WGN + QFALA V+ W + + R G S ++ + ++ + +L+PV+ LL ++YAAVG+ ++ ET+M+LF AL + G +W+S+ A+ ++ D+ + + +P + L LD+ LYEHA V K Q++++G+
Sbjct: 36 ACWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKNDLLVAS-----MTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 122 bits (306), Expect = 6.110e-27 Identity = 85/295 (28.81%), Postives = 145/295 (49.15%), Query Frame = 2
Query: 8 SCWIFMHMDKSGASGAR---RVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAVFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYL------------ARGGIAEDEV----LESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDIAESEPF-RQLLENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 820
+CW+F H +K+G + + R E + + + + RGD D++ L+ GG E LR+ + CKW T+ RHPIARL+SA+ +C G +D +C E + FA+ WGN+A+ QFAL V + +A + A W+ K Y A DE + +L+PV+ LL + YAAVG+ + + +M+LF AL + G +W+ + A+L + S+ I E + + +P + + LD+ LYE+A + ++Q+ ++ +
Sbjct: 36 TCWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEI--FAEEVDAPA----WFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRK-----SQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Match: F0Y323_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y323_AURAN) HSP 1 Score: 61.2 bits (147), Expect = 6.070e-6 Identity = 53/192 (27.60%), Postives = 74/192 (38.54%), Query Frame = 2
Query: 80 RKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRSHKGRSCKWLTIFRHPIARLLSAYDHCLGAPKDPVCPPTESTGLAV-----FAELWGNFAMRQFALAA--VSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEVLESMLEPVKGLLSTQYAAVGVAQELETTMVLFSKALSMEGLDWS 634
R D+ FD R D D A + L+GG S + G SC W+T FR P+ARL+SA HC DP+C + A A WGNF LA +A + R+ +W + L G E + L V L + V V + E +M L + + W+
Sbjct: 671 RCDDANFDWASKRCPD---LDPAAGANRWLNGGYALS-HAAAGPSCAWITNFREPVARLVSAQFHCTLHDHDPLCGDRPAAWFAAANASRMARYWGNFGFTNLLLAPRFAGTAAPRRDMRARRRDGAPKVWQRWRAALGGGDDPRTEAGAANLRRVVAALGDLFDVVVVVERWEDSMALLDCRVPLRDGTWA 858 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9572.31203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9572.31203.1 >prot_Ecto-sp8_S_contig9572.31203.1 ID=prot_Ecto-sp8_S_contig9572.31203.1|Name=mRNA_Ecto-sp8_S_contig9572.31203.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=268bp MHMDKSGASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHback to top mRNA from alignment at Ecto-sp8_S_contig9572:472..2532+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9572.31203.1 ID=mRNA_Ecto-sp8_S_contig9572.31203.1|Name=mRNA_Ecto-sp8_S_contig9572.31203.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2061bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9572:472..2532+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9572:472..2532+ >mRNA_Ecto-sp8_S_contig9572.31203.1 ID=mRNA_Ecto-sp8_S_contig9572.31203.1|Name=mRNA_Ecto-sp8_S_contig9572.31203.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9572:472..2532+ (Ectocarpus species8 EcLAC_412)back to top |