mRNA_Ecto-sp8_S_contig9568.31191.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9568.31191.1
Unique NamemRNA_Ecto-sp8_S_contig9568.31191.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 8.190e-184
Identity = 298/310 (96.13%), Postives = 304/310 (98.06%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGA 930
            APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDA KYPVPDDWLEPAERA+RRK XXXXXXXXXXXXXXXXXXXX  TANPEAVSEEDVQ++EGDS+SD KAK DTP+HGVSVAKEAADVSAKRERETEDAAESE+EMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGA
Sbjct:  159 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERAERRKXXXXXXXXXXXXXXXXXXXXXAETANPEAVSEEDVQQKEGDSDSD-KAKADTPDHGVSVAKEAADVSAKRERETEDAAESEQEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGA 467
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 229 bits (584), Expect = 9.910e-66
Identity = 163/317 (51.42%), Postives = 197/317 (62.15%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLE-----PAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFF-SVIPNPNA--GAKKPAPKAKAG 927
            A  EAEAQCAALAR+GVV+GT TEDMDALTF+TPKL+RR+T +  NQPI+EVDY  +L+GL L+HE+FVD+C+LCGCDYT SI+GIGPKKAL L+++H +IEEI+KHLD +K+ +P DW+      P  +      XXXXXXXXXXXXXXXXXXXXXX                                   V +EA                      D  PMY++AR LFL+P+V PA  Y LKWTDP+   L  FLVE+  FNAERVA+GI KLK ARK   Q RMD+FF S  P P    G K+PA   K G
Sbjct:  160 ASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLIRRLT-TNKNQPIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADWIPGETPTPLAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAPVVQEAVPA-------------------DKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVEKMQFNAERVAAGIKKLKEARKKGGQTRMDTFFKSTAPPPGTKVGVKRPAEVKKGG 456
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.110e-63
Identity = 149/305 (48.85%), Postives = 187/305 (61.31%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAP 912
            AP EAEAQCAALA+ G+V+ TATEDMDALTFQTP LL+RMTFS   Q PI+++ + KLL GL ++ E+FVDLC+LCGCDY     GIGPK AL LVR++G +E I+K+LD  K+P+P  W  PA +        XXXXXXXXXXXXXXXX    +      +E D Q+ +             PE   S              ET    E E+  +   P++ + R LF  P V+      LKWT+PDE GLIKFLVEEKGFNAERV+SGI KLK  +   +Q+RMDSFF      ++  +K AP
Sbjct:  182 APGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLLKRMTFSAKQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGWERPAPKPADPAPAAXXXXXXXXXXXXXXXXSEGGSEVTHEENETDAQEPDA-----------KPEPAASA-------------ETAQEPEKEQPWE---PLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKGFNAERVSSGIKKLKEMKGKGTQQRMDSFFKSTGMVSSSKRKAAP 459
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: W7U4Z8_9STRA (Flap endonuclease 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4Z8_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.130e-59
Identity = 130/295 (44.07%), Postives = 176/295 (59.66%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVS--EEDVQKEEGDSESDNKAKTDTPEHGVSVAKE----AADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFF 867
            AP EAEAQCAALA+ G VY  ATED D LTF TP+LLR MT +G N PI E+DY+K+L+GL L+H +F+DLC+L GCDYT +I+GIGPK AL L++++G IE +++++   KY VP +WL    R K RK                        + P +VS  EE  +   GD  +   A+ D+ + G+   KE    AA + A+     E A   E E+ + P  Y  AR LF++PE+    E   KW +P+E GL  FL++  GFN +RV SGI KLK +R  + QKR+DSFF
Sbjct:  160 APCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDN-PIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWL---PRIKVRKPSSLPP------------------SAPPSVSPVEEGDKAMPGDENACKTAEVDS-KAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMP-AYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 430
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: A0A7S0GGI1_9STRA (Flap endonuclease 1 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GGI1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.200e-58
Identity = 137/318 (43.08%), Postives = 178/318 (55.97%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTF-SGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKE-EGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTP----PMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVS--QKRMDSFFSVIPNPNAGAKKPAPKAKAGA 930
            AP EAEAQCAA+A  G+VY  ATEDMDALTF+TP LLR+MTF SGS   I  + Y K +QGL+++H+ FVDLC++ GCDY  +I+GIGPK AL L+R+H  IEEI+K++D  +Y +PD W+    RAK                              E V+E+  +KE EG  E DNK                           ++  +S+E+  +T     P+Y +AR LF   EV    +  LKW D     L KFLVE+ GFNA+RV S I KL+ A K+ S  Q RMDSFF++ P+ NAG  K A K KA A
Sbjct:  124 APCEAEAQCAAMANAGLVYAVATEDMDALTFKTPVLLRKMTFVSGSKSDIQTMSYPKAIQGLDITHDMFVDLCIMMGCDYCDTIRGIGPKTALKLIREHKCIEEILKNIDRERYHIPDSWIPNEARAK------------------------------EEVAEKKREKELEGTDEEDNK---------------------------DNKGDSQEQTKNTDEKLVPIYVEARRLFNFHEVLTKDDIDLKWLDCKPAELTKFLVEKCGFNADRVKSSIEKLQKAHKSSSKPQMRMDSFFAMKPSANAG--KLAAKRKAAA 382
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: A0A2P8XUV2_BLAGE (Flap endonuclease 1 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XUV2_BLAGE)

HSP 1 Score: 200 bits (508), Expect = 2.090e-56
Identity = 119/300 (39.67%), Postives = 148/300 (49.33%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGA 897
            AP EAEAQCAAL + G V+ TATEDMDALTF T  LLR MTFS + + PI E    K+L+GLELS  +F+DLC+L GCDY  SIKGIGPK+A+ L+RQH  +E I+K+LD NKY VP+DW                                                                                                    MY++AR LFL+PEV    +  LKWTDPDE GL+K+L  +K FN +RV +G  KL  AR   +Q R+DSFF V+P+PN  A
Sbjct:   89 APCEAEAQCAALVKAGKVFATATEDMDALTFGTSVLLRHMTFSEARKMPIQEFHLSKVLEGLELSQNEFIDLCILLGCDYCDSIKGIGPKRAIDLIRQHRNLETILKNLDKNKYAVPEDW----------------------------------------------------------------------------------------------------MYKEARQLFLEPEVADVEKLDLKWTDPDEEGLVKYLCGDKAFNEDRVRNGSKKLAKARSGTTQGRLDSFFKVLPSPNNNA 288
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: K0SL99_THAOC (Flap endonuclease 1 n=2 Tax=Bacillariophyta TaxID=2836 RepID=K0SL99_THAOC)

HSP 1 Score: 200 bits (509), Expect = 3.280e-55
Identity = 133/306 (43.46%), Postives = 171/306 (55.88%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQP-ILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVS--QKRMDSFFSVIPNPNAGAKKPA 909
            AP EAEAQ AALA+ G VY TATEDMDALTFQTP  +R+MTF+ ++Q  I EV+Y K L GL L+H++FVDLC+L GCDY  +IKGIGPK AL L+++H  IE I+K L+  KY VP+ + EP   A++R+                                    +E+GDS+++                   D +AK  +   +  E EE +    P+Y +AR LF   EV P  E +LKW D     L  FLV+E GFN ERV S I KL+ A K     Q RMDSFFS+ PNP A AK+ A
Sbjct:  160 APCEAEAQAAALAKAGKVYATATEDMDALTFQTPIQVRKMTFAKASQAEIQEVNYSKALIGLGLNHDQFVDLCILLGCDYCDTIKGIGPKTALKLIKEHNNIETILKTLNREKYTVPESY-EPNVAARKRQL-----------------------------------EEDGDSDNE-------------------DATAKTGKPKTEGEEDEEIL----PVYVEARKLFNSHEVLPDSEIELKWKDCQPEQLKAFLVDEMGFNPERVQSNIEKLQKAHKTSKKPQMRMDSFFSLKPNPEADAKRAA 406
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: A0A0H5R5L4_9EUKA (Flap endonuclease 1 n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R5L4_9EUKA)

HSP 1 Score: 197 bits (501), Expect = 1.160e-54
Identity = 113/290 (38.97%), Postives = 153/290 (52.76%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFF 867
            AP EAEAQCAALA+EGVV+ TATED+DALTF TP LLR +TFS + + P+ E+   ++L+GL+++ E+F +LC+LCGCDYTGSI+GIGP+K+LAL++++  IE  +KH+D  KY VPDD+L                                                                                                    Y+++  LF+ PEV PAG  KL+W  PDE GLIKFLV+EK F+ +RV SG+ KLK A+K  SQ+R++SFF
Sbjct:  158 APCEAEAQCAALAKEGVVFATATEDLDALTFGTPILLRYLTFSQARKMPVAEIHLDEVLKGLDITMEQFRELCILCGCDYTGSIRGIGPQKSLALIKEYSDIETALKHIDTKKYAVPDDFL----------------------------------------------------------------------------------------------------YQESERLFISPEVLPAGSVKLEWKAPDEDGLIKFLVDEKQFDLDRVKSGLAKLKEAKKKSSQQRLESFF 347
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: UPI001E670742 (flap endonuclease 1-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E670742)

HSP 1 Score: 197 bits (501), Expect = 1.250e-54
Identity = 115/311 (36.98%), Postives = 151/311 (48.55%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGA 930
            AP EAEAQCAALA+ G VYG ATEDMDALTF TP LLR MTFS + + PI E    K+L+ +++S E+F+D+C+L GCDY  SI+GIGPK+A+ L+R H TI+EI+KH+D  KY  P+DW                                                                                                     + +AR LF++PEV    +  LKW +PDE GL+K++ EEKGFN ER+ SG+ KL  AR   +Q R+DSFF V+P P   + K     K G+
Sbjct:  155 APCEAEAQCAALAKAGKVYGVATEDMDALTFGTPILLRHMTFSEARKMPIKEFHLSKILEEIKISQEEFIDMCILLGCDYCDSIRGIGPKRAIELIRNHKTIDEILKHIDTKKYSPPEDW----------------------------------------------------------------------------------------------------RFAEARKLFIEPEVADPEDIDLKWNEPDEEGLVKYMCEEKGFNEERIRSGVKKLLKARSGSTQGRLDSFFKVLPQPPNASNKRKSNEKPGS 365
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Match: UPI000E6D6795 (flap endonuclease 1 n=1 Tax=Hyposmocoma kahamanoa TaxID=1477025 RepID=UPI000E6D6795)

HSP 1 Score: 196 bits (499), Expect = 2.380e-54
Identity = 118/309 (38.19%), Postives = 149/309 (48.22%), Query Frame = 1 
Query:    1 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAERAKRRKQXXXXXXXXXXXXXXXXXXXXXXTANPEAVSEEDVQKEEGDSESDNKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKA 924
            AP EAEAQCAAL + G V+ TATEDMDALTF    LLR +TFS + + P+LE+   K+LQGLEL H++FVDLC+L GCDY GSI+GIGPK+A+ L+RQH  IEE++K++D +KYP P++W                                                                                                     Y  AR LF +PEV  A + +LKW+DPDE GL+KFL  +K FN ERV +G  KL  AR   +Q R+D FF V   PN   K    K KA
Sbjct:  155 APCEAEAQCAALVKAGKVFATATEDMDALTFGADVLLRHLTFSEARKMPVLEIHLDKVLQGLELKHKEFVDLCILLGCDYCGSIRGIGPKRAIELIRQHRCIEEVLKNIDVSKYPPPENW----------------------------------------------------------------------------------------------------EYENARRLFFEPEVADAKDIELKWSDPDEEGLVKFLCGDKQFNEERVRNGAKKLLKARSGTTQGRLDGFFKVTTTPNPKRKAEEEKNKA 363
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9568.31191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF9_ECTSI8.190e-18496.13Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z748_9STRA9.910e-6651.42Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2SD31_9STRA6.110e-6348.85Flap endonuclease 1 n=1 Tax=Rhizochromulina marina... [more]
W7U4Z8_9STRA2.130e-5944.07Flap endonuclease 1 n=2 Tax=Nannochloropsis gadita... [more]
A0A7S0GGI1_9STRA5.200e-5843.08Flap endonuclease 1 n=1 Tax=Proboscia inermis TaxI... [more]
A0A2P8XUV2_BLAGE2.090e-5639.67Flap endonuclease 1 n=1 Tax=Blattella germanica Ta... [more]
K0SL99_THAOC3.280e-5543.46Flap endonuclease 1 n=2 Tax=Bacillariophyta TaxID=... [more]
A0A0H5R5L4_9EUKA1.160e-5438.97Flap endonuclease 1 n=1 Tax=Spongospora subterrane... [more]
UPI001E6707421.250e-5436.98flap endonuclease 1-like n=1 Tax=Procambarus clark... [more]
UPI000E6D67952.380e-5438.19flap endonuclease 1 n=1 Tax=Hyposmocoma kahamanoa ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9568contigEcto-sp8_S_contig9568:3679..6691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score492.3
Seed ortholog evalue1.6e-136
Seed eggNOG ortholog2880.D7FLF9
Preferred nameFEN1
Model size1532
KEGG koko:K04799
KEGG Pathwayko03030,ko03410,ko03450,map03030,map03410,map03450
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000287,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000731,GO:0000734,GO:0000737,GO:0001302,GO:0001654,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004523,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006284,GO:0006286,GO:0006302,GO:0006303,GO:0006308,GO:0006309,GO:0006310,GO:0006312,GO:0006401,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006921,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0007275,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0007568,GO:0007569,GO:0007610,GO:0007611,GO:0007613,GO:0008150,GO:0008152,GO:0008219,GO:0008297,GO:0008309,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009987,GO:0010564,GO:0010638,GO:0012501,GO:0016043,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016796,GO:0016888,GO:0016891,GO:0016893,GO:0016895,GO:0017108,GO:0018130,GO:0019438,GO:0019439,GO:0019725,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022616,GO:0030145,GO:0030154,GO:0030262,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032505,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034655,GO:0035312,GO:0035753,GO:0035822,GO:0035861,GO:0042592,GO:0043010,GO:0043137,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043570,GO:0043596,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045145,GO:0045165,GO:0045787,GO:0045876,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0048256,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051128,GO:0051130,GO:0051276,GO:0051716,GO:0051726,GO:0051908,GO:0051983,GO:0051984,GO:0060041,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090734,GO:0097159,GO:0097194,GO:0098501,GO:0098502,GO:0104004,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902969,GO:1903047,GO:1903469,GO:1904162,GO:2001252
Exons6
EggNOG free text desc.endonuclease activity
EggNOG OGsCOG0258@1,KOG2519@2759
Cds size903
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9568.31191.1prot_Ecto-sp8_S_contig9568.31191.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9568 4233..6616 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145318.3114414-UTR-Ecto-sp8_S_contig9568:3678..42321681145318.3114414-UTR-Ecto-sp8_S_contig9568:3678..4232Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9568 3679..4232 -
1681145318.4094546-UTR-Ecto-sp8_S_contig9568:6616..66911681145318.4094546-UTR-Ecto-sp8_S_contig9568:6616..6691Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9568 6617..6691 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145318.3267298-CDS-Ecto-sp8_S_contig9568:4232..43501681145318.3267298-CDS-Ecto-sp8_S_contig9568:4232..4350Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9568 4233..4350 -
1681145318.3393004-CDS-Ecto-sp8_S_contig9568:4538..46191681145318.3393004-CDS-Ecto-sp8_S_contig9568:4538..4619Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9568 4539..4619 -
1681145318.3615735-CDS-Ecto-sp8_S_contig9568:5023..51061681145318.3615735-CDS-Ecto-sp8_S_contig9568:5023..5106Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9568 5024..5106 -
1681145318.374615-CDS-Ecto-sp8_S_contig9568:5249..56541681145318.374615-CDS-Ecto-sp8_S_contig9568:5249..5654Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9568 5250..5654 -
1681145318.3857727-CDS-Ecto-sp8_S_contig9568:6241..63551681145318.3857727-CDS-Ecto-sp8_S_contig9568:6241..6355Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9568 6242..6355 -
1681145318.3990188-CDS-Ecto-sp8_S_contig9568:6514..66161681145318.3990188-CDS-Ecto-sp8_S_contig9568:6514..6616Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9568 6515..6616 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9568.31191.1

>prot_Ecto-sp8_S_contig9568.31191.1 ID=prot_Ecto-sp8_S_contig9568.31191.1|Name=mRNA_Ecto-sp8_S_contig9568.31191.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=301bp
MDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLC
GCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDANKYPVPDDWLEPAER
AKRRKQARQEAKARKEARAKEEAKVKAETANPEAVSEEDVQKEEGDSESD
NKAKTDTPEHGVSVAKEAADVSAKRERETEDAAESEEEMDDTPPMYRQAR
GLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKG
ARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGAKGKAGAKGKAGGKKR
*
back to top

mRNA from alignment at Ecto-sp8_S_contig9568:3679..6691-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9568.31191.1 ID=mRNA_Ecto-sp8_S_contig9568.31191.1|Name=mRNA_Ecto-sp8_S_contig9568.31191.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3013bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9568:3679..6691- (Ectocarpus species8 EcLAC_412)
GCTCCTTCTGAAGCTGAGGCGCAGTGCGCTGCTCTGGCTCGGGAGGGAGT
TGTGTACGGCACCGCCACGGAAGATATGGACGCGCTCACGTTTCAAACTC
CCAAGTTGCTGCGCCGCATGACTTTTTCCGGTTCCAACCAGCCAATTCTG
GAGGTGGACTACCAGAAGCTGCTCCAGGTCAGCCGAGATTATGTGCTCCT
TTTGGACGATCTTTTCCCGATCCCTGTGCTCATGTCTGCTCTCCTATTCT
CATGAGATGCATGACCATAACGTTCGCAAATATGTGAAATCGTTCACCGA
CCCGTTGTCTACGCGACGGTTAACATGTATCTGCAGGGGTTGGAGCTCTC
CCACGAGAAGTTTGTTGACCTCTGCGTCCTCTGTGGTTGTGACTACACTG
GATCGATCAAAGGGATCGGCCCAAAGAAAGCGCTTGCTCTTGTTCGTCAG
GTGAGGAACCACGTACGTCGTACTTATGAACTTGTCCGGGTCCAGGAGGA
CACCGTGATGCCAATCGATCATTGTGGCGTCGCGGTAGCAGGGACGAAAC
CCATTACAAGCCAAATTGAACCAGATGAATCAAAATGTACAGTAGCAGTC
GCACAGGAGATGCTCAGTCGCTGGCGCTGGCTTGATAGGACTAAAGCAGA
TGGACTGGCAATGGAGGAGTTGTCGGCGTAAGGTTCTCGTGTGGCATTGA
TTTGGACATGAAAATTTTATTGGGATATGCATAAGGGTTAGGGTTAGGGT
ATTTTCGTAACCTTTTTTGGGTAAGTTAGCCTGTGACCACGGGAATCGAC
CCCGTCAAGTGTTAGACTAGTGAGGACAGAAGAAGGTACTGGACAGAGAG
GACGGAACGGTTTATTGTGAAGACAACAACAACATATGCGTATCATGGAT
GACACGAGTCCCAAACCCGCCGTTGCTGCAGTTTGCTACCTTTTCAACCA
CATGTGATCATTTCTTCGAAAATCAGTGTGCCCCAAGCCCTGACGCTTCC
CAAACTCCCAACCTAATTCGGCTTTTTCCTTTTTCAGCATGGCACCATCG
AGGAGATCATCAAGCACCTTGACGCCAACAAGTACCCAGTACCCGACGAC
TGGTTAGAGCCTGCTGAGAGGGCCAAGAGGCGCAAGCAGGCAAGGCAGGA
GGCAAAGGCAAGGAAGGAGGCCCGCGCGAAGGAAGAGGCCAAGGTGAAGG
CTGAGACCGCCAATCCTGAGGCTGTGAGCGAGGAAGACGTGCAAAAGGAG
GAGGGCGACTCCGAGAGTGACAACAAGGCGAAGACTGACACGCCGGAGCA
CGGGGTCAGCGTTGCCAAGGAAGCCGCAGATGTCTCCGCGAAACGCGAGC
GAGAAACGGAAGATGCCGCAGAGAGCGAAGAAGAGATGGACGACACCCCT
CCAATGTACCGTCAAGCCAGAGGACTGTTCCTCAAGCCTGAGGTAAGGTA
TTCTACCTCGCTACCTCTCCAATGCTACCAATAGCGGTGGCAACCTTTAT
CGTCCTGGATAGATTCTACATCTACCACGGCTCTGCAGGTCTTTCTTTGA
TGCAACTAAGTCAGAAGTAATTGGCCAACTTGCAGGTGGAACCAGCCGGG
GAGTATAAGCTGAAGTGGACCGACCCTGACGAGCCGGGACTGATCAAGTT
CCTCGTTGAAGAAAAGGGGTGCGTACCACGACCTCACAACATCGTCTCCG
TATTATAAGCGGTTGCTTGGTTGGACTTCGGGTTTTCACTAACTTGTTCA
AGACGGTGCTCGAGGCTTGTACGCACTCAAGAAAAGGAGGATCTTCATCA
TTGCCCCAATTGTTTGCAGGAGTCGAGCGAACGTACGTTTCCTATATCCG
TGTCCATGGCTATGGAAATACACGCAGCATGCCTGGGGTAAGCATCATGA
AGGCGGGGTTCATCGCATGTCAAGGGGTTTATCGGGGGGGTGGAAAGTGA
TGCGATGTTCACCAGTTTGGAAACTAGTGTGTTTTCACCATTGTTCCCTT
CGAGAAAAGGGTGTCGAAACCTTGTGGTCACCCAGGTCGTGCTTGAAAGA
TGTTCTGATCCGCTTGCAACAGGTTCAACGCTGAACGCGTAGCGTCCGGC
ATTGTGAAGCTCAAGGGCGCACGGAAGAACGTGTCGCAGAAGCGGATGGA
CAGGTGAACAAGTGATTTCGTGATCCTGTGGTCTATAGATACGTAATGAG
AGATCTTTTCAATCACCAGATGCATTGAAATGTGATGTGTTCAAGCGATT
TGCCGTCCGGTGTGACGCTCTGATTCAGTGAATCAAGGCAATGCCGGTAG
CTCGCTCACGGAACAAAATCCCGCAACTTTCCCTCTCACAGCTTTTTCAG
CGTCATCCCCAACCCGAATGCTGGTGCCAAGAAGCCCGCCCCGAAAGCTA
AAGCTGGGGCGAAAGGGAAGGCCGGGGCAAAGGGCAAGGCCGGGGGAAAG
AAGCGGTAGAGAGAGTGAGCGGAGCTCCAGGATCGACCTCAGCAAAACCT
AGAGACACTACGAACTACGAACGAATATGCCGAGGTCAACAATACCGCAG
CCTGCGGTCTGTCTGCTGTTCATGAATGAAAGATGGGCATCAGCGACGAC
GGCTGTAGAGAGGTCGATTTGTTTCCGGTTCCACAGAGGTGTAAAGTGTG
TGGCGGGAAGCTTTCGGTTTCAGCGAGGTTTCGAGGAAGTCCCCGAGATC
TTCTCTTGAAATCAAACCAGATTCTAAGGAGCCCCCTTGGTGGAGCAGCG
TGAAAAATATTGTAGCTGCAGTCGTTCCAGAGACCAGATGGCCACGACAG
AGTGCATCTTGTTGGATACAACAGAATGGTGACCGTAAATCCAGACGCGG
GGGGCTTCGCCCGCCCTGTCCTTTATTGGGGGCACAGCCGTCCGCGTGCT
TCGTAGATAATGTGGAGTATGCCACGTGGAAGGTAATGTGTATCAGAGGT
GGTAGAAACCAACAACCCTCCACGCGACCAAGTACCACCTGCTGCCGCTG
TTCCCAAAGAGGC
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9568:3679..6691-

>mRNA_Ecto-sp8_S_contig9568.31191.1 ID=mRNA_Ecto-sp8_S_contig9568.31191.1|Name=mRNA_Ecto-sp8_S_contig9568.31191.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9568:3679..6691- (Ectocarpus species8 EcLAC_412)
ATGGACGCGCTCACGTTTCAAACTCCCAAGTTGCTGCGCCGCATGACTTT
TTCCGGTTCCAACCAGCCAATTCTGGAGGTGGACTACCAGAAGCTGCTCC
AGGGGTTGGAGCTCTCCCACGAGAAGTTTGTTGACCTCTGCGTCCTCTGT
GGTTGTGACTACACTGGATCGATCAAAGGGATCGGCCCAAAGAAAGCGCT
TGCTCTTGTTCGTCAGCATGGCACCATCGAGGAGATCATCAAGCACCTTG
ACGCCAACAAGTACCCAGTACCCGACGACTGGTTAGAGCCTGCTGAGAGG
GCCAAGAGGCGCAAGCAGGCAAGGCAGGAGGCAAAGGCAAGGAAGGAGGC
CCGCGCGAAGGAAGAGGCCAAGGTGAAGGCTGAGACCGCCAATCCTGAGG
CTGTGAGCGAGGAAGACGTGCAAAAGGAGGAGGGCGACTCCGAGAGTGAC
AACAAGGCGAAGACTGACACGCCGGAGCACGGGGTCAGCGTTGCCAAGGA
AGCCGCAGATGTCTCCGCGAAACGCGAGCGAGAAACGGAAGATGCCGCAG
AGAGCGAAGAAGAGATGGACGACACCCCTCCAATGTACCGTCAAGCCAGA
GGACTGTTCCTCAAGCCTGAGGTGGAACCAGCCGGGGAGTATAAGCTGAA
GTGGACCGACCCTGACGAGCCGGGACTGATCAAGTTCCTCGTTGAAGAAA
AGGGGTTCAACGCTGAACGCGTAGCGTCCGGCATTGTGAAGCTCAAGGGC
GCACGGAAGAACGTGTCGCAGAAGCGGATGGACAGCTTTTTCAGCGTCAT
CCCCAACCCGAATGCTGGTGCCAAGAAGCCCGCCCCGAAAGCTAAAGCTG
GGGCGAAAGGGAAGGCCGGGGCAAAGGGCAAGGCCGGGGGAAAGAAGCGG
TAG
back to top