mRNA_Ecto-sp8_S_contig9567.31187.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9567.31187.1
Unique NamemRNA_Ecto-sp8_S_contig9567.31187.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A6H5K027_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K027_9PHAE)

HSP 1 Score: 857 bits (2213), Expect = 6.660e-311
Identity = 474/528 (89.77%), Postives = 476/528 (90.15%), Query Frame = 1 
Query:    1 MNHGHRVSWAAGAGTAPPQFNNLAMNXXXXXXXXXXXXDGPVHPAAAAAA-----VENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNE---------VDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEVALFHGHAVQEEEXXXXXXXXXXXXXXXXXXXXXXXXNGGASMGHYDHASSTARAPPPTHHPRMMSNSGIDHNSYSNYVHNMGPGRNHADHSANIAHSTYFNGIGASARPQAPVAGM 1542
            MNHGHRVSWAAGAGTAPPQFNNLAMNXXXXXXXXXXXX                 VENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAG DPDNE         VDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNAS ASV LLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLR+MILQEVALFHGHAVQE  XXXXXXXXXXXXXXXXXXXXXXXX    SM HYDHAS             MMSNSGIDHNSYSNYVHN+GPG NHADHSANIAHSTYFN IGASARPQAPVAG 
Sbjct:    1 MNHGHRVSWAAGAGTAPPQFNNLAMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGPDPDNEDPGPLFLTQVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASVASVDLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRDMILQEVALFHGHAVQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMAHYDHASXXXXXXXXXXXXXMMSNSGIDHNSYSNYVHNVGPGHNHADHSANIAHSTYFNRIGASARPQAPVAGF 528
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: D8LJT0_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT0_ECTSI)

HSP 1 Score: 840 bits (2171), Expect = 9.790e-305
Identity = 449/478 (93.93%), Postives = 452/478 (94.56%), Query Frame = 1 
Query:  151 VENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNE---------VDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEVALFHGHAVQEEEXXXXXXXXXXXXXXXXXXXXXXXX-----NGGASMGHYDHASSTARAPPPTHHPRMMSNSGIDHNSYSNYVHNMGPGRNHADHSANIAHSTYFNGIGASARPQAPVAGM 1542
            +ENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAG DPDNE         VDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEAS+ LLE LLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPG DFDFESEPMHQEQLRNMILQEVALFHG+AVQEEEXXXXXXXXXXXXXXXXXXXXXXXX     NGGASMGHYDHASSTARAP      RMMSNSGIDHNSYSNYVHNMGPG NHADHSANIAHSTYFN IGASARPQAPVAGM
Sbjct:    1 MENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGPDPDNEDPDPLSLTQVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASLALLERLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGLDFDFESEPMHQEQLRNMILQEVALFHGYAVQEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGGASMGHYDHASSTARAPXXXXXXRMMSNSGIDHNSYSNYVHNMGPGHNHADHSANIAHSTYFNRIGASARPQAPVAGM 478
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: D8LJT1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT1_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 3.470e-174
Identity = 242/348 (69.54%), Postives = 285/348 (81.90%), Query Frame = 1 
Query:  151 VENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEV 1194
            + N F +  R+S  K +G+GSFG VCSALD +QGK+VAIKK+ PM++ VV AKH LREIRLMRYL  HPNIVSLEDL +++ YDELYIVMELLD DLH +I +S Q L D HHRYFMFQ+LKGVKFLH NR+IHRDLKP N+L TK C LRITDFGLARLRP G G++PD+EVD+PMTE  VTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAE+LGR P FPG++F  QL+LIFD VGSP+PHEV+HIRN +A +FLE+MQ RVKVP+A+L   ASE ++ LLEGLLVF PPCR S DEAL H YF PL  +    PDP+V+PGF+FDFES+P+ + QL+ MIL EV
Sbjct:   55 MNNTFRVDSRYSGLKAIGKGSFGFVCSALDEKQGKKVAIKKIHPMAQHVVDAKHVLREIRLMRYLGSHPNIVSLEDLFISEHYDELYIVMELLDSDLHRII-QSPQALGDAHHRYFMFQLLKGVKFLHSNRIIHRDLKPGNVLVTKNCHLRITDFGLARLRPMGRGTNPDDEVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVSHIRNSQAKKFLETMQDRVKVPYAELFAGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLR-KSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEV 400
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A835Z9A0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A0_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 5.070e-157
Identity = 229/345 (66.38%), Postives = 267/345 (77.39%), Query Frame = 1 
Query:  163 FHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEVA 1197
            F +  R+ + K VG+GS+G VCSALD +  KRVAIKK+ PM++  V AKH LREIRLMRYL  HPNI+SLED+ V +  DELYIVMELLD DLH +I +S QPL D HHRYFM+Q+L+GVKFLHDNR+IHRDLKP N+L TK CQLRITDFGLAR RP G G+ PD EVD+PMTE  VTRWYRPPELMLCPDGLY YAVDLWSVGCIFAE+LGR P FPG +F  QL+LIFD VGSP  HEVAHIRN +A RFL+SM G+ K P+A L P ASE ++ LLE LLVFDPP R S  +AL H YF  L     +  DP VA G +FDFES+PM + QL+ +ILQEV+
Sbjct:   32 FTVESRYRDLKAVGKGSYGIVCSALDLRTEKRVAIKKITPMAQQAVDAKHVLREIRLMRYLGVHPNIISLEDVAVREFDDELYIVMELLDSDLHRII-QSAQPLSDAHHRYFMYQLLRGVKFLHDNRIIHRDLKPGNLLVTKSCQLRITDFGLARERPLGRGAGPDEEVDDPMTEHVVTRWYRPPELMLCPDGLYTYAVDLWSVGCIFAELLGRAPLFPGTNFVDQLTLIFDVVGSPSQHEVAHIRNNQARRFLDSMAGKDKQPYAALFPQASEQAIDLLEHLLVFDPPKRLSVADALDHPYFDALRTTEGLREDPPVAVGLEFDFESQPMARLQLKQLILQEVS 375
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A7S3XUM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUM8_HETAK)

HSP 1 Score: 413 bits (1061), Expect = 5.650e-138
Identity = 198/353 (56.09%), Postives = 263/353 (74.50%), Query Frame = 1 
Query:  163 FHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPL-SGRIHVPPDPEVAPGFDFDFES-EPMHQEQLRNMILQEVALFHGHA 1215
            F     +   K +G+GS+G VCSA+D + G +VAIKK+ PM++D+V AKH LREIRLMRYL  HPNI++LEDL + +Q+DELYIVMELLD DLH +I +S+QPL D H R+FM+Q+LKGVKF+HD+++IHRDLKP N+L T+ C+LRITDFGLAR++P       +   + PMTE  VTRWYRPPELMLCPDGLYG+ VD+WS GCIFAEMLGR+P FPG++F  QL+LIFD +G+P   +VAHIRN +A +FL+S+  R++VPFA+L P A+  +V LLE  LVF P  R + DE L H YF PL +G     P P ++ GF+FDFE+ E + + Q++ ++++EV  F   A
Sbjct:   20 FRCEAAYHTLKAIGKGSYGVVCSAVDQRTGHKVAIKKISPMAQDIVDAKHVLREIRLMRYLGTHPNIITLEDLWIKEQHDELYIVMELLDSDLHRII-QSSQPLSDAHFRFFMWQLLKGVKFMHDHQIIHRDLKPGNLLVTRNCELRITDFGLARMKPEAQDIHGEEAEEEPMTEHVVTRWYRPPELMLCPDGLYGFDVDIWSSGCIFAEMLGRKPLFPGKNFVHQLTLIFDVIGAPDAEDVAHIRNSQARKFLDSVADRLRVPFAELFPGATAPAVDLLERFLVFHPANRMTIDECLDHPYFDPLRTGETPSEP-PVMSSGFEFDFEADETITRLQMKQLVMREVDSFRAEA 370
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A4D9DEH4_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEH4_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 2.470e-128
Identity = 198/356 (55.62%), Postives = 260/356 (73.03%), Query Frame = 1 
Query:  163 FHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVA---------PGFDFDFESEPMHQEQLRNMILQEVALF 1203
            F +   + + K VG+GS+G VCSAL+ +  + VAIK+V P+S  V+ AKH LREIR+MRYL  H NI++L+DL +    DELYIVMELLD DLH +I +S Q L D H R+FM Q+LKG+KFLHD+R+IHRDLKP N+L T+ C+LRITDFGLAR RP G G +PD+ ++ PMTE  VTRWYRPPELMLCPDGLY YAVD+WSVGCIFAE+LGR+P FPG++F  QL+LIFD +G+P+P EVAH+++ +A RFL+S+  + KVPFA L P AS  +++LL  LLVF+P  R + D+AL H+YF+PL   + +      A         P  DFDFE+  +++ QL+ MI +EV  F
Sbjct:   31 FKVDKAYQDLKPVGKGSYGIVCSALNVETKENVAIKRVSPISTHVIDAKHVLREIRMMRYLGTHENIITLKDLALRDADDELYIVMELLDSDLHRII-QSKQALSDAHFRFFMHQVLKGLKFLHDHRIIHRDLKPGNLLVTRACELRITDFGLARARPAGKGQNPDDSIEEPMTEHVVTRWYRPPELMLCPDGLYDYAVDMWSVGCIFAELLGRKPLFPGKNFVHQLTLIFDVIGAPRPQEVAHVKSSQAKRFLDSVAAKKKVPFATLFPEASREALSLLNSLLVFEPAHRLTVDQALGHKYFEPLRHSVQLQQQQLAADAAQAARPPPKLDFDFETGHLNKGQLKQMIQREVESF 385
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A7S2CNX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNX5_9STRA)

HSP 1 Score: 363 bits (931), Expect = 3.830e-119
Identity = 176/340 (51.76%), Postives = 234/340 (68.82%), Query Frame = 1 
Query:  202 GRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEVALFHGHAVQ 1221
            G+GS+G V SA D++ G +VAIKK+ PM+     AKH LRE+RLMRYL  HPN++++ +L  N   DELYIVMELLD DLH +I +S Q L D H RYFM+Q+ +G+ +LHDN +IHRDLKP N+L T+ C LRITDFGLAR +    G D    V++ MT+  VTRWYRPPELMLCPDG YG++VD+WS GCI AE++ R+P FPG++F  QL+LIF+ +G+P+   V+HI N +A++FL+S+  + KV F DL  +A     +LLE LLVF+P  R SA EAL+  YF P          P V P F+FDFE+  + +  L+ +IL E+A F   A Q
Sbjct:    1 GKGSYGVVASANDTELGCKVAIKKIKPMTAHAADAKHVLREVRLMRYLSAHPNVITISNLFANTAADELYIVMELLDSDLHRII-QSPQALSDAHTRYFMYQLFRGIAYLHDNNIIHRDLKPGNLLVTRNCDLRITDFGLAREKAGAVGQDEMGSVEDQMTQHVVTRWYRPPELMLCPDGRYGFSVDMWSAGCIMAELIARKPLFPGKNFVHQLTLIFNIIGAPEKDNVSHITNKQAMKFLQSVSNKPKVMFRDLYSSAPSTVTSLLEELLVFEPVKRMSAQEALNDIYFAPFEPEKET--SPPVHPDFNFDFENGNLPKNALKRLILDEIAAFQKEARQ 337
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A7S1XRS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRS6_9STRA)

HSP 1 Score: 365 bits (937), Expect = 3.860e-115
Identity = 190/375 (50.67%), Postives = 252/375 (67.20%), Query Frame = 1 
Query:  160 NFHLGPRFSNFKVVGRGSFGEVCSALDS----------QQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSD-PDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPL------SGRIHVPPDPEV-APGFDFDFESEPMHQEQLRNMILQEVALFHGHAVQEEE 1230
            +F +  +++  K +GRGS+G V SA D+          +   RVAIK++ P+S+    AKH LRE+RLMR+L  HPN+++L D +V +  DELY+VMEL+D DLH VI +S Q L + H RYFM Q+L+GV F+H+NR+IHRDLKP N+L ++ C LRITDFGLAR RP+G   D PD  V +PMTE  VTRWYRPPELMLCPDGLY YAVDLWS GCI AE+LGR+P FPG++F  QL LIFD +G+P+  EVAHIR+ +A RFL+++Q + +VPFA L PN+S A+  L+  LLVFD   R   D+A++H +F PL       G++     P     G DFDFE   + +  LR M+  E    HG   + +E
Sbjct:   43 DFFVPKKYTALKAIGRGSYGVVASATDTLLAADAEKDNEVNPRVAIKRISPISQSSSDAKHVLRELRLMRHLGKHPNVITLRDCVVKEDRDELYLVMELMDSDLHRVI-QSPQALTEAHARYFMIQLLRGVHFMHENRIIHRDLKPGNLLVSRNCDLRITDFGLARERPSGPRRDTPDEGVIDPMTEHVVTRWYRPPELMLCPDGLYTYAVDLWSCGCILAELLGRRPLFPGKNFVHQLQLIFDVIGAPRSEEVAHIRSSQARRFLQTVQEKRRVPFAVLYPNSSPAAHDLIGRLLVFDEKKRLGTDKAMAHSFFDPLVYGREDGGKMADAAYPRGRVSGLDFDFEEGRVSKSALRRMLHDEA---HGFRAERKE 413
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: A0A421FNC0_9STRA (Protein kinase domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FNC0_9STRA)

HSP 1 Score: 345 bits (885), Expect = 2.010e-111
Identity = 185/367 (50.41%), Postives = 244/367 (66.49%), Query Frame = 1 
Query:  163 FHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARL-------------RPTGAGSDPDN-EVDN--PMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPL-------SGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEV 1194
            F +  R+     +G+GS+G VC+A D + G+ VAIKKV PM++  V AKH LRE+ L+++L  HPNI+S+ +L  N + DELYIVM+L+D D+H VI +S+QPL D H +YF+ Q+L+GVK+LHDN V+HRDLKP N+L +K CQL+I DFGLAR              RP  A +   N  V +  PMTE  VTRWYR PELML PDGLY  +VD+WSVGCIFAE+LGR+  FPG++F  QL+LIFD +G+P P     I++ +A RFL S+  + KVPF  L PNASEA+V LL+ LL FDP  R SA +AL+H Y Q +       SG I  PP   V    DF F+S+ +    LR +I++EV
Sbjct:   32 FKVSSRYQFLNPLGKGSYGIVCAAKDHETGQSVAIKKVTPMAKRAVDAKHTLREVLLLQFLGKHPNIISIHNLSTNLKDDELYIVMDLMDTDMHRVI-QSSQPLSDAHAKYFLHQLLRGVKYLHDNGVLHRDLKPGNLLLSKTCQLKIADFGLARKIPRCVATSSNLPERPRSAPAMSSNARVSDRPPMTEHVVTRWYRAPELMLQPDGLYDQSVDMWSVGCIFAEILGRKALFPGKNFLHQLTLIFDVIGAPPPEATTRIQSSQAQRFLRSLDRKSKVPFRTLFPNASEAAVDLLDRLLEFDPAKRISAQDALAHPYMQDIERKYRNRSGGIDPPPLMRV----DFSFDSKNLSNMDLRALIVKEV 393
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Match: H3G6P2_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6P2_PHYRM)

HSP 1 Score: 342 bits (878), Expect = 3.980e-111
Identity = 176/351 (50.14%), Postives = 242/351 (68.95%), Query Frame = 1 
Query:  163 FHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVVSAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYVINKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQLRITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADEALSHRYFQPL-------SGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEV 1194
            F +  R+     +G+GS+G VC+A D + G+ VAIKKV PM++  V AKH LRE+ L+++L  HPN++S+ +L  N + DELYIVM+L+D D+H VI +S+QPL D H +YF+ Q+L+GVK+LHDN V+HRDLKP N+L +K CQL+I DFGLAR  P GA   P      PMTE  VTRWYR PELML PDGLY  +VD+WSVGCIFAE+LGR+  FPG++F  QL+LIFD +G+P       I++ +A RFL+S+  + KVPF  + P+ASE+++ LL+ +L FDP  R SA +AL+H Y Q +       SG +  PP P  A   DF F+ + + +  LR +I++EV
Sbjct:    8 FKVSSRYQFLNPLGKGSYGVVCAAKDRETGQCVAIKKVTPMAKRTVDAKHTLREVLLLQHLGKHPNVISIHNLSANVKDDELYIVMDLMDTDMHRVI-QSSQPLSDAHAKYFLHQLLRGVKYLHDNGVLHRDLKPGNLLLSKTCQLKIADFGLARKIPRGAADRP------PMTEHVVTRWYRAPELMLQPDGLYDQSVDMWSVGCIFAEILGRKALFPGKNFLHQLTLIFDVIGAPAAGATTKIQSSQAQRFLQSLGKKPKVPFRSIFPSASESAMDLLDRMLEFDPAKRISAQDALAHPYMQEMERKHRHRSGGVEPPP-PMRA---DFSFDLKNLTKMDLRALIVKEV 347
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9567.31187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K027_9PHAE6.660e-31189.77Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LJT0_ECTSI9.790e-30593.93Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
D8LJT1_ECTSI3.470e-17469.54Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z9A0_9STRA5.070e-15766.38Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S3XUM8_HETAK5.650e-13856.09Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DEH4_9STRA2.470e-12855.62Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A7S2CNX5_9STRA3.830e-11951.76Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1XRS6_9STRA3.860e-11550.67Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A421FNC0_9STRA2.010e-11150.41Protein kinase domain-containing protein n=4 Tax=P... [more]
H3G6P2_PHYRM3.980e-11150.14Protein kinase domain-containing protein n=1 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9567contigEcto-sp8_S_contig9567:350..5824 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score845.1
Seed ortholog evalue1.7e-242
Seed eggNOG ortholog2880.D8LJT0
Preferred nameMPK11
Model size1542
KEGG koko:K04371,ko:K08293,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000749,GO:0000750,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0008150,GO:0008152,GO:0009272,GO:0009653,GO:0009987,GO:0010033,GO:0010468,GO:0010927,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019236,GO:0019538,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022607,GO:0023014,GO:0023052,GO:0030154,GO:0030435,GO:0030437,GO:0030476,GO:0031136,GO:0031137,GO:0031139,GO:0031505,GO:0032005,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0036211,GO:0042173,GO:0042174,GO:0042221,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043939,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0045595,GO:0045596,GO:0046777,GO:0046999,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0070887,GO:0071310,GO:0071444,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071940,GO:0140096,GO:1901564,GO:1903046,GO:2000241,GO:2000243
Exons9
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
Ec32 ortholog descriptionmitogen-activated protein kinase
Ec32 orthologEc-23_000020.1
EC2.7.11.24
Cds size1542
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9567.31187.1prot_Ecto-sp8_S_contig9567.31187.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9567 350..5824 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145318.053698-CDS-Ecto-sp8_S_contig9567:349..7001681145318.053698-CDS-Ecto-sp8_S_contig9567:349..700Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 350..700 -
1681145318.0684724-CDS-Ecto-sp8_S_contig9567:1356..14651681145318.0684724-CDS-Ecto-sp8_S_contig9567:1356..1465Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 1357..1465 -
1681145318.0806484-CDS-Ecto-sp8_S_contig9567:1750..18841681145318.0806484-CDS-Ecto-sp8_S_contig9567:1750..1884Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 1751..1884 -
1681145318.0943482-CDS-Ecto-sp8_S_contig9567:2324..24471681145318.0943482-CDS-Ecto-sp8_S_contig9567:2324..2447Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 2325..2447 -
1681145318.1106436-CDS-Ecto-sp8_S_contig9567:3190..33491681145318.1106436-CDS-Ecto-sp8_S_contig9567:3190..3349Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 3191..3349 -
1681145318.1216743-CDS-Ecto-sp8_S_contig9567:3833..39741681145318.1216743-CDS-Ecto-sp8_S_contig9567:3833..3974Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 3834..3974 -
1681145318.1336794-CDS-Ecto-sp8_S_contig9567:4553..47401681145318.1336794-CDS-Ecto-sp8_S_contig9567:4553..4740Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 4554..4740 -
1681145318.1457136-CDS-Ecto-sp8_S_contig9567:5216..53051681145318.1457136-CDS-Ecto-sp8_S_contig9567:5216..5305Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 5217..5305 -
1681145318.1583955-CDS-Ecto-sp8_S_contig9567:5575..58241681145318.1583955-CDS-Ecto-sp8_S_contig9567:5575..5824Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9567 5576..5824 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9567.31187.1

>prot_Ecto-sp8_S_contig9567.31187.1 ID=prot_Ecto-sp8_S_contig9567.31187.1|Name=mRNA_Ecto-sp8_S_contig9567.31187.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=514bp
MNHGHRVSWAAGAGTAPPQFNNLAMNNNVVNNNNGAVVDGPVHPAAAAAA
VENNFHLGPRFSNFKVVGRGSFGEVCSALDSQQGKRVAIKKVFPMSRDVV
SAKHALREIRLMRYLEPHPNIVSLEDLLVNQQYDELYIVMELLDCDLHYV
INKSNQPLDDVHHRYFMFQILKGVKFLHDNRVIHRDLKPSNILATKRCQL
RITDFGLARLRPTGAGSDPDNEVDNPMTETAVTRWYRPPELMLCPDGLYG
YAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIR
NPEAIRFLESMQGRVKVPFADLLPNASEASVTLLEGLLVFDPPCRFSADE
ALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRNMILQEVAL
FHGHAVQEEEEEDEDDDEDDDDDDDDDGDHGEDGNGGASMGHYDHASSTA
RAPPPTHHPRMMSNSGIDHNSYSNYVHNMGPGRNHADHSANIAHSTYFNG
IGASARPQAPVAGM
back to top

mRNA from alignment at Ecto-sp8_S_contig9567:350..5824-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9567.31187.1 ID=mRNA_Ecto-sp8_S_contig9567.31187.1|Name=mRNA_Ecto-sp8_S_contig9567.31187.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5475bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9567:350..5824- (Ectocarpus species8 EcLAC_412)
ATGAATCACGGCCATCGTGTGAGCTGGGCTGCCGGCGCCGGTACCGCGCC
GCCCCAGTTCAACAACCTCGCCATGAACAACAACGTCGTCAACAACAACA
ACGGTGCGGTGGTGGATGGTCCCGTCCACCCCGCCGCCGCCGCCGCGGCA
GTGGAGAACAACTTTCATCTTGGACCACGCTTCAGCAACTTCAAGGTGGT
CGGTAGAGGCTCTTTCGGAGAAGTCTGCTCGGCTTTGGACTCTCAGCAGG
TAATCCACGGCCCTGCGGTAGGTAGGGATAGGGCTAACATTAGGCTCTTC
TTCCATGCAACGGAAGGCAAAGGAAGAGAAAAATCTGCGGCGCTTTATTC
TTTTTCTGCTCCGCAATCTAGTTTTTTGCGACGCTCGTAACACAATCGAT
TTGTTGCTCATGGTGCTTTGAAAGTTCGCCTGTGTCCCACCCATCCTATG
ACACAGCCAGCTGCATGCTAATCTCACGGACTTTTGATCTCAACTTGATG
CGACCGACGACGATGTCAGGGGAAACGAGTCGCCATCAAGAAGGTCTTCC
CCATGTCCCGCGACGTCGTCAGCGCCAAGCACGCTCTGCGCGAGATAAGG
CTCATGAGGTGTGTTTTGTGCTCTATACGGCAACCGCGTCATGCCCTAAG
GAGCACGGCACACTCACGTTTACGGCGCACCAATCGGCGTATCACCACAC
ACAAGATACGCTTGTTTTCAAATGCCATCCTATCCTTTGGCAACCGCTGC
CCTATCTTTTCGGGCACGTCTCTCTGGCATACCCACACCCGTTGCAAATC
TAAACCACAGCATCAGAGCCATCTATCCCCACTTGTTGTATTTCACAGTG
CTTGTATCTGCTTTAATGAAGAGCATCTGATGTACAGTACACGTTTGGTG
CGTACCCTGAGGTGGACTCCTCCTGGTGATGTAAGCGCGAACTTGGTCTC
CGCGGATTCGTCAAGCACGTTTGAAGAACGAATTCCGAGACGATGGAGCA
CATCGAAAATACAGTCTAGCACACGCACCCACACCCAGTGCAGGGTACCT
GTACCGACCTAAAACATTGCCATCCCCCATCCAGGTATCTCGAGCCTCAC
CCGAACATCGTCTCCCTGGAGGACCTGTTGGTCAACCAGCAATACGACGA
GCTCTACATCGTCATGGAGCTTTTGGATTGCGACCTCCACTACGTGATTA
ACAAGTCCAACCAGCCCCTCGATGACGTACACCACCGCTACTTTATGTTC
CAGATTCTCAAGGGGGTCAAGGTCAGTCAACGGCTGGTGTTGGTCGTTGG
GATGGAAGCAAATCGAAATTGTACTTAAACGCCGCCACATCATTGTCCCG
AAGTGCAAATAAACAAGCAGGCATTGCGACTATTAGAAAACCGGTCACAA
TTATTGTTTTTCGTGCAGACTCTTTGTCAGTAAGAACGCCAAGCCCGATC
AGACGTGTCAAAAGCATTTGTCATTGGTATTGCGACGATTTTGGTTGGGG
ATCTCTTTGTGTAGGACAAAGGGTACTGGTACCCTAGCCCACTTGTAGAG
GGTCGCGTTCGTTCCCACCTCATGACGGCCTCAGGAGATTGTGTTTGACC
TTGTGCTTGGTGTCTGGTCGCGCGGTTCAGCAGTGCTTTTACTATGGACC
TTCGTTACCCATGAAAACCGTTACACCTAAGAGCGACACAGTAACCGCCG
GTTCCCAGGATACCTATTGTAGAGGTGCAAGCCGATGACATCTGACCAGT
CTAACGCGTGTGCTGTTCGGTACGTTAGGGATACATAGTGTTCACGTCGT
CACAAACACGTTTTTCTTTTCTTTCCTTTTTCAACTTGGCGTATCCGCAG
TTCCTCCATGACAACCGCGTCATCCACCGTGATCTCAAACCGAGCAATAT
CCTAGCCACGAAGAGGTGCCAGCTGCGGATCACCGACTTCGGGTTGGCGA
GGCTGAGGCCCACGGGTGCAGGTTCCGACCCCGACAATGAGGTACTATGC
AGTTTGTACCACACAAAATGCTTGTTAAGTCAAGCTTTTTTTTTTTACAT
TCAAAGTTCGTCTTAGCCGACGGTTCTCACAGAAGGAATGCGGTCTGAGC
ACCATGTCTTCCAAGGTTTTAGACCCAAGCCGTGATGATCCATACTTCCA
AGTATCCTGGCTTGGGTAATGCAAACGCCTCAGGTTCGAACCCCGACAAC
GAAGTACTTGATGAACTTAAACGCCTTGACGCGGGGTTTGCAGAAGAGTG
CGTTGAATAGCACTTCAACTGGAGTGTAGGTGGACCATGTACCGCACTGA
TGTAGGTCTGTTGCGCTGGATCGAGTTGGTGGAACGCCTGCCTCTCTCAC
TCCTTACAGCCTCCAAAAGTCTCATCACAATGATCGGGATGGCCGTGACA
AGAAGACCGTATCGCACCCCCGAGCTCGACTCGTCCCCTGAAGAACAGGA
CCCTGAACCTCTATCCTTAACCCAGGTGGACAACCCTATGACCGAGACTG
CTGTGACCAGGTGGTACCGCCCGCCCGAGCTCATGCTCTGTCCCGACGGC
CTGTACGGCTACGCGGTGGACCTGTGGAGCGTCGGCTGCATATTCGCCGA
GATGCTAGGGCGCCAGCCATTTTTCCCCGGCCAGGTAATCCTGTCTTCCA
AAGCTTACGCCAAACTTGTACCCCTACCGCGTAATAACACTCGGGAGTTC
TCCGACTACACCTTTTCTTCCCTAATCGAACAAGTAGAACTGGAATTTCG
GTGAAAATGTATGTCCAACCTTCTACTTGTTGCATTACTGTACTAACAGA
CAATATCGAGTCGATAATGTCTGGTGAGAAGGCGATGTATGCAGCTCGCT
GACTAGCACGTTCCCCGAAGTTTTGATTTCAACTGCCACCTCACCGTTAT
TCTTCAGAACGTTTTTTCTTTGCCTTCTCCGTGTTTCTTTTCAAAATGTT
GATATTCTCCGTGTTTTTTTTCTCGAGTTTTGTTTGCTCAGTTTTTTTGT
CAGATTCCCGTCGAGGTAACTATATCTTCTCGGGTACTACTGTTCTCGAC
CCGTCCACTCGTGTGTTTTGGTCGGCCGTACCTCTACCGAACTGCTGCCC
TGCCAAGAGCTCTTGCTTGCCAGATCCTTGCGGCAGATCTTCAATGGTCT
CGATTTCTCGCCGCGCCACCCAAAGCACGTGAAGCGTGAAAAATGCCAAG
GTGCAGCTTCATACAATGGAGTCTATCCACCGGTCGAATTTGGCTACCCC
CTCCATCCTCACCTTAAAAGGTCTCCTCCCCCTTGATACCGTAAAAAACA
AAACAAGAAAAAGAGGCTGAGACACGGGACGAATACTCCATCCTTCGCCC
CCCCCCTCCTTGTTCGCCCTGTCACAGGATTTCAAGAAGCAGCTTTCACT
CATTTTCGATGCCGTGGGGTCACCCCAGCCGCACGAGGTGGCTCACATCC
GAAACCCCGAGGCAATCCGCTTCTTGGAGTCGATGCAGGGCCGAGTTAAG
GTGAGCACGCTGCTACAAGTCCCGGCGAATTGTGGTGTATTCAATGCTGT
GACATTATTCTAAATAGAATACAATCTCACCATGCCGCGACAGTTACATC
TATCGTTCGGAACCCACACCGAAAAGAACTATGGAGTGAATAAGAGCTTT
TCTGGACGGTTTGTCGGAACGAGGATAGAAAAGGGTCGCGTACAGTCACG
GGCGTGATCCGAAGGAAGAATAAGGCATCCGAGCATTGGTGGGAAACACT
GGGGTTTGTGCTGCTGGTTTCAGCTGAAACGATGTAGGTACGGACATAGC
ACCGACGGCAGACGCTCTCCTCGTGGCGTTGGTTTTCGCCAGATCTTTTC
CGCTGTACCCTCCTGGCTACCCCACATCCCATTTTTCTCTCGCCGGTAAT
CTAATCGAGTGCTGTTTATCAACTGCCCCAACAATCCCAGGTGCCCTTCG
CCGACCTTCTACCGAACGCGTCGGAAGCCTCAGTTACCCTTTTGGAAGGG
CTGCTTGTCTTCGACCCCCCGTGCCGCTTCTCGGCGGACGAGGCCCTCAG
CCACCGATACTTCCAACCTCTCAGGTAAAGCTACGACGGCCGGTGTCCGC
CGTTTAGAACCATGTCTATGTTTCCTTCGAATAGTATGATTTTCCACGGT
GTGCTGCTCAATCGTGTTCCGGCCATTGCTCTCTCTCTTGCTCCCTCCCT
CTCCCTCTCTCGTTGTCTGTTATCCCCACTTATGTCACCCCCCCCATCCC
TTTTCTGCCCCCCCCCTCCTCTCGTTTTGTCTACATCTCTGTTGCGCGCG
CTCTTTCTCTCGCCATCCGTTTCGCCCTTCGCGTGTTCTCTCCTTCTCCA
AAAACGTAGTGGGAGGATCCACGTACCCCCCGACCCGGAGGTGGCCCCAG
GCTTCGACTTTGACTTCGAGAGTGAGCCCATGCACCAAGAACAGCTGCGG
AACATGATCTTGCAGGAGGTAGGGCAACACTGTAGCACTTTCTCCTGTTA
TCCAACATAACTCGCACAACCGATGGTTCGGTCTACACCCGCATTTCGAA
CCTCTACTTAGAGTAAACAAGCATTGTGTTGGAGAAGCTGAGAATTTCAA
TGTAGTTCTGTAGCCCTATCCCTTATACAATGCGCGGAAGAGGTGGTTTA
TCCTTTTCCCTAACCCCAACCACCCCAACTTATCGTCATGAATTACAACA
ATGTTTTTCACGACCATACTTGTGGGTCGAACACCCGAAATAATCTCCGT
GGGAGCTGCGGCGAGAAAACAAATACGCTTTGCAAGCGACTCATGGAGCA
GAGACACACGTTGAACTACATGTAGGAGAGGGAGTGACATCACTCGAACT
CCGAATACCTGTCTAAGAATATGTCTGCGGGGATAATATAGAGATGGACT
TCTTGAAAACAACGCCAGTGATCTCATTGGTGACCTGATACGGCGATGGT
CGGGCGAAATACGGTACAACGAGAGACCCGTTCGCACCCGTCCTCTTGAC
CTTGCGTGCTTTCACCCCCCTGACACAAGTTGCATAATCAAAGGAGCTCT
GGATGTGTAAGAACAGTTCAGTACACTTGCATATGGATACAGATTTTGAC
GCACTCGTTCGGACTTCTTACCAGGTGGCATTATTTCATGGACACGCGGT
GCAAGAGGAGGAAGAAGAGGATGAAGACGACGACGAAGACGACGACGATG
ATGATGATGACGATGGCGACCATGGCGAGGATGGCAACGGTGGGGCCTCT
ATGGGTCACTACGATCACGCTTCTTCCACTGCTCGTGCTCCACCTCCCAC
TCACCACCCCCGCATGATGAGCAACAGCGGTATCGATCACAACAGCTACA
GCAACTACGTGCACAACATGGGTCCAGGGCGCAACCACGCCGACCACAGC
GCAAACATTGCCCACAGCACTTACTTCAACGGAATCGGCGCGAGCGCACG
GCCTCAAGCCCCGGTAGCAGGTATG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9567:350..5824-

>mRNA_Ecto-sp8_S_contig9567.31187.1 ID=mRNA_Ecto-sp8_S_contig9567.31187.1|Name=mRNA_Ecto-sp8_S_contig9567.31187.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1542bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9567:350..5824- (Ectocarpus species8 EcLAC_412)
ATGAATCACGGCCATCGTGTGAGCTGGGCTGCCGGCGCCGGTACCGCGCC
GCCCCAGTTCAACAACCTCGCCATGAACAACAACGTCGTCAACAACAACA
ACGGTGCGGTGGTGGATGGTCCCGTCCACCCCGCCGCCGCCGCCGCGGCA
GTGGAGAACAACTTTCATCTTGGACCACGCTTCAGCAACTTCAAGGTGGT
CGGTAGAGGCTCTTTCGGAGAAGTCTGCTCGGCTTTGGACTCTCAGCAGG
GGAAACGAGTCGCCATCAAGAAGGTCTTCCCCATGTCCCGCGACGTCGTC
AGCGCCAAGCACGCTCTGCGCGAGATAAGGCTCATGAGGTATCTCGAGCC
TCACCCGAACATCGTCTCCCTGGAGGACCTGTTGGTCAACCAGCAATACG
ACGAGCTCTACATCGTCATGGAGCTTTTGGATTGCGACCTCCACTACGTG
ATTAACAAGTCCAACCAGCCCCTCGATGACGTACACCACCGCTACTTTAT
GTTCCAGATTCTCAAGGGGGTCAAGTTCCTCCATGACAACCGCGTCATCC
ACCGTGATCTCAAACCGAGCAATATCCTAGCCACGAAGAGGTGCCAGCTG
CGGATCACCGACTTCGGGTTGGCGAGGCTGAGGCCCACGGGTGCAGGTTC
CGACCCCGACAATGAGGTGGACAACCCTATGACCGAGACTGCTGTGACCA
GGTGGTACCGCCCGCCCGAGCTCATGCTCTGTCCCGACGGCCTGTACGGC
TACGCGGTGGACCTGTGGAGCGTCGGCTGCATATTCGCCGAGATGCTAGG
GCGCCAGCCATTTTTCCCCGGCCAGGATTTCAAGAAGCAGCTTTCACTCA
TTTTCGATGCCGTGGGGTCACCCCAGCCGCACGAGGTGGCTCACATCCGA
AACCCCGAGGCAATCCGCTTCTTGGAGTCGATGCAGGGCCGAGTTAAGGT
GCCCTTCGCCGACCTTCTACCGAACGCGTCGGAAGCCTCAGTTACCCTTT
TGGAAGGGCTGCTTGTCTTCGACCCCCCGTGCCGCTTCTCGGCGGACGAG
GCCCTCAGCCACCGATACTTCCAACCTCTCAGTGGGAGGATCCACGTACC
CCCCGACCCGGAGGTGGCCCCAGGCTTCGACTTTGACTTCGAGAGTGAGC
CCATGCACCAAGAACAGCTGCGGAACATGATCTTGCAGGAGGTGGCATTA
TTTCATGGACACGCGGTGCAAGAGGAGGAAGAAGAGGATGAAGACGACGA
CGAAGACGACGACGATGATGATGATGACGATGGCGACCATGGCGAGGATG
GCAACGGTGGGGCCTCTATGGGTCACTACGATCACGCTTCTTCCACTGCT
CGTGCTCCACCTCCCACTCACCACCCCCGCATGATGAGCAACAGCGGTAT
CGATCACAACAGCTACAGCAACTACGTGCACAACATGGGTCCAGGGCGCA
ACCACGCCGACCACAGCGCAAACATTGCCCACAGCACTTACTTCAACGGA
ATCGGCGCGAGCGCACGGCCTCAAGCCCCGGTAGCAGGTATG
back to top