mRNA_Ecto-sp8_S_contig9555.31173.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: D8LFC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFC8_ECTSI) HSP 1 Score: 628 bits (1619), Expect = 1.510e-224 Identity = 340/352 (96.59%), Postives = 342/352 (97.16%), Query Frame = 1
Query: 1 MDVDAGTILPRGELIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSLATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRAMARGENPADADVGAGRGXXXXXXXXXXXXXXXXXXXXXXXXAAGEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSPEG 1056
MDVD GTILPRGELIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTQLEMSCDNK LAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSLATTITLGESGEEEE+YSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRA+ARGEN ADADVGAG G XXXXXXXXXXXXXXXXXXXXX GEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVS EG
Sbjct: 1 MDVDTGTILPRGELIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTQLEMSCDNKQLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSLATTITLGESGEEEEIYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRALARGENLADADVGAGDGATAXXXXXXXXXXXXXXXXXXXXXX-GEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSAEG 351
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: A0A7S3YAZ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAZ1_HETAK) HSP 1 Score: 202 bits (515), Expect = 2.210e-59 Identity = 124/339 (36.58%), Postives = 172/339 (50.74%), Query Frame = 1
Query: 40 LIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSLATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRAMARGENPADADVGAGRGXXXXXXXXXXXXXXXXXXXXXXXXAAGEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSPEG 1056
L KT+V A Q + E D YV + ++ + +AA+ S + LYS M G+++ H+ +T+++F+ P+ +SAS D T++GWDTR+L++ +T S EV+ +ALGYD L A G ++F+D+R + + LG Y+E H+DAVTQV F P K + TGSEDGL+C +DT V E+DAL +VMN +C +R +GFFG G+YC T TE LSLWH AQ+I D GD R A G G +D +VDC YD AAD L L AG V PEG
Sbjct: 6 LSKTVVTTFDKPAPADTQDDETMEFDS------HYVFECILNKNQDLIAASASDNTIKLYSYPDMDAVGQMEAHSDTITRVSFSQHRPTELYSASHDCTIKGWDTRTLSSGLTFSTS---YEVHDIALGYDDNLIAAGMPERVQFFDVRSS-RQLGEYTESHSDAVTQVAFCPDKPGLLATGSEDGLVCVYDTGVPCEDDALVAVMNPDCALRRLGFFGAGSPGLYCLTGTEGLSLWHWGTAQQIADAGDARG-----------------------------------------AVGAAGGPRLDYLVDCAYDRAADELSLWAGDNAGALHRLVVGPEG 293
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: D7G3A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A5_ECTSI) HSP 1 Score: 178 bits (452), Expect = 2.650e-51 Identity = 124/162 (76.54%), Postives = 133/162 (82.10%), Query Frame = 1
Query: 574 MLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDV-RAMARGENPADADVGAGRGXXXXXXXXXXXXXXXXXXXXXXXXAAGEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSPEG 1056
MLTGSEDGL+ ALDSVMNAE PVRSVGFFG E EGV+CCTNT+TLS W+AAGAQR+KDFGDV RA+A GE PADAD G XXXXXXXXXXXXXXXXXXXXXXXX AG+DWG AVD +VDCQYDA ADRLRLVTSS +GGACLATVSPEG
Sbjct: 1 MLTGSEDGLV-----------HALDSVMNAEFPVRSVGFFGLEEEGVHCCTNTDTLSFWYAAGAQRVKDFGDVVRALASGELPADADGGVXX-XXXXXXXXXXXXXXXXXXXXXXXXVAGDDWGFAVDYLVDCQYDATADRLRLVTSSDSGGACLATVSPEG 150
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: A0A225WZ64_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ64_9STRA) HSP 1 Score: 182 bits (462), Expect = 8.660e-51 Identity = 102/248 (41.13%), Postives = 147/248 (59.27%), Query Frame = 1
Query: 70 TAAADARQSENIS----ESDDDDGPRLEYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSL--ATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVR 795
TA A Q E+ S +DD D +Y+ + + N LA ALS+ +V L SVET+ L + H + ++ +PS P + S D V+ WDTR+ A + +G EV+S+A+G L ATG D L FYD+R GK LG Y E H DA+T+VRFHP +++F++T SEDG++CFFD + E+DAL+S++N E V VGFFGP+ E ++C T TETL LW+ A+R+ + +R
Sbjct: 13 TAVASFPQQEDTSLVANPTDDFD---YDYILDCQPTAHNSGLALALSTCKVQLRSVETLGLLHEFHAHNSTINEVWTSPSSPYQLATCSSDECVKLWDTRAALPAMVVPVGR-----EVWSLAIGCGETLLATGTDELALFYDVR-TGKQLGQYGESHVDAITKVRFHPTQQAFIVTASEDGVVCFFDCRIPDEDDALESILNVESAVSRVGFFGPQNENIFCLTGTETLDLWNIWTAERLHHYNTIR 251
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: G4Z594_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z594_PHYSP) HSP 1 Score: 175 bits (443), Expect = 9.480e-48 Identity = 97/259 (37.45%), Postives = 147/259 (56.76%), Query Frame = 1
Query: 25 LPRGELIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSL--ATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVR 795
L RG L A +A+ A+Q + +D +YV + + LA ALS+ ++ L S ET+AL + H + ++ +PS P + S D V+ WDTR+ A + +G EV+S+++G L A G D L FYD+R G LG Y E H DA+T+VRFHP + +F++T SEDG++CFFD + E+DAL+S++N E + ++GFFGP+ E ++C T TETL LW+ AQR+ + +R
Sbjct: 5 LERGGLALAQTAVASFSASAAQQGDTALVADPAQDFDYDYVLDCQPTAQRSGLALALSTYKLQLRSRETLALVHEFHAHNSTIHEVWTSPSSPHQLATCSSDECVKLWDTRAALPAMVVPVGR-----EVWSLSVGCGETLLAAGTDELALFYDVR-TGAQLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAITNIGFFGPQKENIFCLTGTETLDLWNLWTAQRLHHYATIR 257
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: A0A0W8D6X8_PHYNI (Replication factor C subunit 2 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D6X8_PHYNI) HSP 1 Score: 174 bits (442), Expect = 1.100e-47 Identity = 88/219 (40.18%), Postives = 133/219 (60.73%), Query Frame = 1
Query: 139 EYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSLATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVR 795
+YV + + + LA ALS+ ++ L S+ET+ L + H + ++ +PS P + S D V+ WDTR+ + L EV+S+++G L ATG D L FYD+R G LG Y E H DA+T+VRFHP + +F++T SEDG++CFFD + E+DAL+S++N E V +VGFFGP+ E ++C T TETL LW+ A+R+ + +R
Sbjct: 39 DYVLDCQPTANKSGLALALSNCKIQLRSLETLGLMHEFHAHNSTINEVWTSPSSPFQLATCSSDECVKLWDTRTALPAMVLPVG---REVWSLSIGCGETLLATGTDELALFYDVR-TGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIR 253
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: A0A484EBF9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBF9_BRELC) HSP 1 Score: 172 bits (435), Expect = 9.090e-47 Identity = 106/341 (31.09%), Postives = 169/341 (49.56%), Query Frame = 1
Query: 40 LIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSL--ATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRAMARGENPADADVGAGRGXXXXXXXXXXXXXXXXXXXXXXXXAAGEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSPEG 1056
L +T V A + AR+ I+E D D Y+ + + LA ALS+ ++ L ++ET++L + + H+ + ++ +PS P + S D V+ WDTR+ A + +G EV+S+++G L ATG D L FYD+R G L Y E H DA+T+VRFHP +++F++T SEDG++CFFD + +ED ++S+ N E V +VGFFGPE E ++C T +ETL LW+ A+R+ + +R +G D ++DC YD + L L+ ++ G T+S +G
Sbjct: 6 LEQTAVVAFASPGDIARELTKINEDSDYD-----YILDCQPTAQKSGLALALSNGKMQLRNLETLSLLHEFQAHSSAINEVYTSPSSPFQLATCSSDHCVKLWDTRTALPAMVVPVGR-----EVWSLSIGCGETLLATGTDELALFYDVR-TGTLLNQYGESHVDAITKVRFHPMQQNFVVTASEDGVVCFFDCRIPEKEDTIESIFNVESAVTTVGFFGPERENIFCLTGSETLDLWNIWTAERLHHYDTIRDDCN------------------------------------------KYGFKTDYLIDCVYDDQSSELFLLAGNHEGNMNAVTISKDG 293
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: H3GVV6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVV6_PHYRM) HSP 1 Score: 171 bits (434), Expect = 1.610e-46 Identity = 103/308 (33.44%), Postives = 155/308 (50.32%), Query Frame = 1
Query: 139 EYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSL--ATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRAMARGENPADADVGAGRGXXXXXXXXXXXXXXXXXXXXXXXXAAGEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSPEG 1056
+YV + + LA ALS+ V L S ET+AL + H + ++ + S P + S D V+ WDTR+ A + +G EV+S+++G L A G D L FYD+R K LG Y + H DA+T+VRFHP ++SF++T SEDG++C FD + E+DAL+S++N E V +VGFFGP+ E ++C T TETL LW+ A+R+ + +R +N G+A D ++DC YD AD L L+ ++ G T+ +G
Sbjct: 41 DYVLDCQPTAHGSGLALALSTRTVQLRSRETLALVHEFHAHNSTIHEIWTSASSPHQLATCSSDECVKLWDTRAALPALVVPVGR-----EVWSLSIGCGETLLAAGTDELALFYDVRTGAK-LGQYGDSHVDAITKVRFHPTQQSFVVTASEDGVVCVFDCRIPDEDDALESILNVESAVSTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYATIRDDCN-QN-----------------------------------------GLATDYLIDCVYDDQADELFLLAGNHDGDMNAVTIGTDG 300
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: A0A3R7H5D5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5D5_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.340e-46 Identity = 86/221 (38.91%), Postives = 134/221 (60.63%), Query Frame = 1
Query: 139 EYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSL--ATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVR 795
+Y+ + + LA ALS+ +V L S++T+ L + H + ++ +PS P + S D V+ WDTR+ A + +G EV+S+++G L ATG + L FYD+R G LG Y E H DA+T+VRFHP + +F++T SEDG++CFFD + E+DAL+S++N E V ++GFFGP+ E ++C T TETL LW+ A+R+ + +R
Sbjct: 41 DYILDCQPTAHKSGLALALSNRKVQLRSLDTLGLVHEFHAHNSTINEVWTSPSSPYQLATCSSDECVKLWDTRAALPAMVVPVGR-----EVWSLSIGCGETLLATGTNELAMFYDVR-TGNKLGEYGESHIDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAVTTIGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYATIR 255
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Match: A0A8J5IR07_9STRA (Protein kinase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IR07_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.010e-45 Identity = 90/221 (40.72%), Postives = 135/221 (61.09%), Query Frame = 1
Query: 139 EYVTQLEMSCDNKHLAAALSSLEVNLYSVETMALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSL--ATTITLGESGEEEEVYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVR 795
EYV + + + LA ALS+ ++ L S+ET+ L + H + + +PS P + S D V+ WDTR+ A + +G EV+S+++G L ATG D L +FYD+R G LG Y E H DA+T+VRFHP + +F++T SEDG++CFFD + E+DAL+S++N E V +VGFFGP+ E ++C T TETL LW+ A+R+ + +R
Sbjct: 39 EYVLACQPTANKSGLALALSNCKIQLRSLETLGLLHEFHAHNSTINDVWTSPSSPFQLATCSSDECVKLWDTRAALPAMVVPVGR-----EVWSLSIGCGETLLATGTDELAQFYDVR-TGNKLGQYGESHVDAITKVRFHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAVTNVGFFGPQQENIFCLTGTETLDLWNLWTAERLHHYDTIR 253 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9555.31173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9555.31173.1 >prot_Ecto-sp8_S_contig9555.31173.1 ID=prot_Ecto-sp8_S_contig9555.31173.1|Name=mRNA_Ecto-sp8_S_contig9555.31173.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=352bp MDVDAGTILPRGELIKTIVAAEPTAAADARQSENISESDDDDGPRLEYVTback to top mRNA from alignment at Ecto-sp8_S_contig9555:3585..7155+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9555.31173.1 ID=mRNA_Ecto-sp8_S_contig9555.31173.1|Name=mRNA_Ecto-sp8_S_contig9555.31173.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3571bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9555:3585..7155+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9555:3585..7155+ >mRNA_Ecto-sp8_S_contig9555.31173.1 ID=mRNA_Ecto-sp8_S_contig9555.31173.1|Name=mRNA_Ecto-sp8_S_contig9555.31173.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1056bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9555:3585..7155+ (Ectocarpus species8 EcLAC_412)back to top |