mRNA_Ecto-sp8_S_contig9539.31152.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9539.31152.1
Unique NamemRNA_Ecto-sp8_S_contig9539.31152.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI)

HSP 1 Score: 610 bits (1574), Expect = 1.760e-207
Identity = 395/686 (57.58%), Postives = 422/686 (61.52%), Query Frame = 1
Query:    1 LTETQDHYYWYFWVILDNCDTAYTWSDNFVQLSYVDDEQNIIDLSGFEDPNIDETETGICSTPSPVAPTPVTDATPAPTPAPTMRGETVMNVLSCSRSVGPYSDCRVHAHDVNQRFGSFCLQSSC-------RRCSSAAMPRAGFALYGVVTTRRENHKQAKLNDAVYHHIYSGRQSRY------PWAAKSGRVTSTTR-------CALQVFQLGWLGRFTKQ-------LFALLHRGRLRVRATRHAHGRRSRHQQRQQSRRLD-GLLRRDD*CGIGVC------RRRVQLLHIQLGSGREPAYNILAPPFAPLANQRLRRASDPRSHPHRCG---RAVWR*HRVHLRRDRRGLGCGSCHP*SRRRIRD*GSSSWRW*AEKHL*QRRLVSVHDCPDGETSGRGAVVCEAVSTPSPTVVEEPPTPNPTPGXXXVMDXXXXXXXX-------------VEWRTQXXXXXXXXXXSTTTGSTPDSLGCYEDDREDRILDDLALSDGSMTTELCELTCLGSTYFATQYGRESTPNPTPSPAATGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            LTETQDHYYWYFWVILDNCDTAYTWSDNFVQLSYVDDEQNIIDLSGFEDPNIDET+TGICSTPSPVAPTPVTDATPAPTPAPTMRG        C    G Y DC  H        G F L  S         R      P A F      T    +  +  ++D     +  G    Y      P       +T T +         LQV    W   FT         ++A L    + V  T +  G R+          +D G     +  G   C         +     +L S R    + +AP    +          P      CG     ++    V L      L  G         ++  G        E       L    DCPDGETSGRGAVVCEAVSTPSPTVVEEPPTPN    XXXVMD   XXXXX             VEWRTQ       X  S TTGS+PDSLGCYEDDREDRILDDLALSDGSMTTELCEL CLGSTYFATQYGRESTPNPTPSPAATGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLG+TYFATQYGRECWCGSAGV+YALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMT EMCEAECTGNTFFGMQYGRE
Sbjct:  120 LTETQDHYYWYFWVILDNCDTAYTWSDNFVQLSYVDDEQNIIDLSGFEDPNIDETDTGICSTPSPVAPTPVTDATPAPTPAPTMRGAYCHGDPHCQTFDGLYYDC--HGD------GDFVLLESADTGAVVHARFEPLVSPDASFTTGVAATEGGSSVIEVTVSDGERTILIDGEAYAYDEGDDLPATMTGVALTVTDQNVDMLFPSGLQVNARRW---FTDPNYIGGVYVYAPLDMPTVGVLGTNN--GNRADDWTDSSGETIDAGSASVAE--GYNYCTSNWEAEESLLTTSSRLRSRRLQTSDYVAPVIPDVI---------PTDVEELCGDNTECIFDAIVVGLDVGAATLEAGEEFE---TEVQAAGGDVCE---ENAFSSDGLSPCTDCPDGETSGRGAVVCEAVSTPSPTVVEEPPTPNXXXXXXXVMDEAAXXXXXXXXXXXXXXXXXXVEWRTQPPTPSPTXGSSXTTGSSPDSLGCYEDDREDRILDDLALSDGSMTTELCELACLGSTYFATQYGRESTPNPTPSPAATGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGNTYFATQYGRECWCGSAGVEYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGNTFFGMQYGRE 775          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 2.310e-112
Identity = 201/336 (59.82%), Postives = 225/336 (66.96%), Query Frame = 1
Query: 1057 VSVHDCPDGETSGRGAVVCEAVST----PSPTVVEEPPTPNPTPGXXXVMDXXXXXXXXVEWRTQXXXXXXXXXXSTTTGSTPDSLGCYEDDREDRILDDLALSDGSMTTELCELTCLGSTYFATQYGRE---------------------------------------------STPNPTPSPAA--TGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYT-DESTPTSSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            +SV + PD +    G  +C  + T    P P    +PPTP+PT G      XX      VE                  GS+  +LGCYEDDREDRI+DDLALSD SMTTELCE TC+G+TYFATQYGRE                                             STP+PTPSP A  +GPL+LGCYEDDRE+RIMDDLALSD+SMTTELCEQTCLG+T+FATQYGRECWCGSAG DY LHGESTDCTYACAGDADQTCGGFDAANVY YT D++  TS+FVGCYQDESDARIMELALTDSSSMT EMCEAECTG+T+FGMQYGRE
Sbjct:  157 LSVFEDPDIDEPDTG--ICRTLDTYPPTPGPLWSPQPPTPHPTVGDEAXXXXXPSTSPPVE------------------GSSV-ALGCYEDDREDRIMDDLALSDYSMTTELCEQTCVGNTYFATQYGRECWCGSAGADYASHGESADCTYACAGDADETCGGFDAANVYLYTGESTPSPTPSPTADESGPLSLGCYEDDRENRIMDDLALSDFSMTTELCEQTCLGNTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGDDALSTSTFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGSTYFGMQYGRE 471          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 8.000e-111
Identity = 311/817 (38.07%), Postives = 357/817 (43.70%), Query Frame = 1
Query:    4 TETQDHYYWYFWVILDNCDTAYTWSDNFVQLSYVDDEQNIIDLSGFEDPN-IDETETGICSTPSPVAPTPVT-----DATPAPTPAPTMRGETVMNVLSCSRSVGPYSDCRVHAHDVNQRFGSFCLQSSC-------RRCSSAAMPRAGFALYGVVTTRRENHKQAKLNDAVYHHIYSGRQSRYPWAAKSGRVTSTTRCA------------LQVFQLGWLGRFTKQ-------LFALLHRGRLRVRATRHAHGRRSRHQQRQQSRRLDGLLRRD--D*CG--IGVCRRRVQLLHIQLGSGREPAYNILAPPFAPLANQRLRRASDPRSHPHRCGRAVWR*HRVHLRRDRR---------GLGCGSCHP*SRRRIRD*GSSSWRW*AEKHL*QRRLVSVHDCPDGETSGRGAVVCEAVSTPSPTVVEEPPTPNPT-----------------------------PGXXXVMDXXXXXXXXVE----------------------WRTQXXXXXXXXXXST-----------------------------TTGSTPD---------SLGCYEDDREDRILDDLALSDGSMTTELCELTCLGSTYFATQYGRE---------------------------------------------STPNPTPSPAA--TGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPT-SSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            +E+  +YYW F + LDNCDT+YTW DNFVQLSYVDDEQN IDLS FEDP  I+E +TGIC TPSP            DATPAPTPAPTMRG        C    G   DC  H        G F L +S         R      P A F      T    +  +  +ND     +  G    Y        +T  T               LQV    W   FT         ++A L    + V  T                   +G +  D  D  G  IG     +   +    S  +P  ++L+ P   L  +RL+ + D  + P      V       L RD           GL  G+    +         +     A   L       V D P  E                PT   +PPTP+PT                                  +MD        +                       W             ST                             T   TP          +LGCYEDDREDRI+DDLALSD +MTTELCE TCLG+ YFATQYG+E                                             STP+PTPSP A    PL+LGCYEDDREDRIMDDLALSD +MTTELCEQTCLG+TYFATQYGRECWCGSAG DY LHGES DCTYACAGDADQTCGGFDAANVY YT +  PT SSFVGCYQDESDARIMELALTDSSSMT E CEAECTGNT+FGMQYGRE
Sbjct:  109 SESGGYYYWLFNLYLDNCDTSYTWDDNFVQLSYVDDEQNAIDLSAFEDPYYIEEPDTGICPTPSPAXXXXXXXXXXXDATPAPTPAPTMRGAYCHGDPHCRTFDGLAFDC--HGD------GDFVLLNSADTGAMVHARFEPLVSPDASFTTGVAATEDGSSVIEVTVNDGERTILIDGEPYAYEGGDFPETMTGVTLTVTDQNVDMLFPSGLQVNARRW---FTDPNYIGGVYVYAPLAMSTVGVLGTN------------------NGNMADDWTDSTGETIGTGAASIAEGYNYCTSNWQPEVSLLSSPSRRL--RRLQTSVDDYTAP--VIPDVIPTDVEELCRDNTECIFDAIVVGLDVGAATLEAGDEFETEVEA-----AGGELPTPSPTVVQD-PTSEXXXXXXXXXXXXXXXXPTGSLDPPTPSPTIRDEAPHXXXXXXXXXXXGSPLALGCYEDDREDRIMDDLALSDNAMTTELCELTCNGQTYFATQYGRECWCGSAGADYTLHGESTDCTYACVGDADQTCGGFDAANVYLYAAESTPSPTPSPTADDAGPLALGCYEDDREDRIMDDLALSDNAMTTELCEQTCLGNIYFATQYGQECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYKGESTPSPTPSPTADDASPLSLGCYEDDREDRIMDDLALSDNAMTTELCEQTCLGNTYFATQYGRECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYTGDDVPTTSSFVGCYQDESDARIMELALTDSSSMTKERCEAECTGNTYFGMQYGRE 886          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 7.250e-89
Identity = 137/159 (86.16%), Postives = 147/159 (92.45%), Query Frame = 1
Query: 1432 ESTPNPTPSPAATGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            ++TP PTP+P   GPLALGCY DDREDRIMDDLALSDYSMTTELCE TCLGSTYFATQYGRECWCGSA +DYALHGESTDCTYACAGDADQTCGGFDAANVY YTDEST  S+FVGCYQDES +RIMELALTDSSSM+MEMCEA+C GNT+FG+QYGRE
Sbjct:  190 DATPAPTPAPTVDGPLALGCYGDDREDRIMDDLALSDYSMTTELCELTCLGSTYFATQYGRECWCGSADMDYALHGESTDCTYACAGDADQTCGGFDAANVYSYTDESTAISAFVGCYQDESGSRIMELALTDSSSMSMEMCEAKCRGNTYFGLQYGRE 348          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 9.470e-88
Identity = 152/237 (64.14%), Postives = 162/237 (68.35%), Query Frame = 1
Query: 1336 LDDLALSDGSMTTELCELTCLGSTYFATQYGRE---------------------------------------------STPNPTPSPAATGP-LALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            +DDL LSD SMTTELCE TC+GS YFATQYGRE                                             STP+         P +ALGCY DDRE RIMDDL LSD SMTTELCE TCLGSTYFATQYGRECWCGS G DYALHGEST+CTY C+GDADQ CGGFDAANVY +T E T TSS VGCYQDESDARIME ALTD+SSMTMEMCEAEC+GNT+FGMQYG E
Sbjct:    1 MDDLVLSDASMTTELCEQTCVGSIYFATQYGRECWCGSVGADYTVHGESTDCTYACSGDADQTCGGFDAANVYRYTDDSTPSXXXXXTEAAPFVALGCYGDDREARIMDDLVLSDSSMTTELCELTCLGSTYFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTGE-TSTSSLVGCYQDESDARIMEFALTDTSSMTMEMCEAECSGNTYFGMQYGTE 236          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 2.480e-79
Identity = 153/259 (59.07%), Postives = 167/259 (64.48%), Query Frame = 1
Query: 1270 STTTGSTPDSLGCYEDDREDRILDDLALSDGSMTTELCELTCLGSTYFATQYGRE---------------------------------------------STPNPTPSPAATGPL-ALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPT--------SSFV--GCYQDESDARIM-ELALTDSSSMTMEMCEAECTG 1875
            S T   +  +LGCYEDD EDRI+D+LALSD SMTTELCELTC+GSTYFATQY RE                                             STP+PTPSP   GP  ALGCY DD EDRIMDDL LSD SMTTELCE TC GSTYFATQYGRECWCGSAG DYALHGESTDCTYAC+GD DQTCGGFDAANVYRY D+STP+        +SFV  GCY D+ + RIM EL L+D S  T    E +C G
Sbjct:  190 SPTEAGSSLALGCYEDDPEDRIMDNLALSDSSMTTELCELTCVGSTYFATQYRRECWCGSADADYALHGESTGCTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALGCYADDPEDRIMDDLVLSDSSMTTELCELTCEGSTYFATQYGRECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVYRYPDDSTPSPTPSPTEAASFVALGCYGDDREDRIMDELVLSDPSMTT----EGKCRG 444          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 3.130e-74
Identity = 132/153 (86.27%), Postives = 136/153 (88.89%), Query Frame = 2
Query:  617 PFYIGGVYVYAPLDMPTVGVLGTNNGNRADDWTDSSGETIDAGSVSVAEGYNYCTSNWEAEESLLTTSSR-LRSRRLQTSDYVAPVIPDLIPTDVEELCGDNTECIFDAIVVGLDVGAATLEAAEEFETEVQAAGGGKLK-NTFSSDGLSPCT 1069
            P YIGGVYVYAPLDM TVGVLGTNNGNR DDWTDS+GETI+ GS S+AEGYNYCTSNWEAEESLLTT SR LRSR LQTSDY A VIPD IPTDVEELCGDNTECIFDAIV GLDVGAATLEAAEEF TEVQAAGG   + NTFSSDGLSPCT
Sbjct:  129 PNYIGGVYVYAPLDMSTVGVLGTNNGNRVDDWTDSTGETIEQGSASIAEGYNYCTSNWEAEESLLTTPSRRLRSRHLQTSDYTALVIPDAIPTDVEELCGDNTECIFDAIVAGLDVGAATLEAAEEFHTEVQAAGGDVCEENTFSSDGLSPCT 281          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D8LNS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS1_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 3.140e-71
Identity = 134/249 (53.82%), Postives = 159/249 (63.86%), Query Frame = 1
Query: 1291 PDSLGCYEDDREDRILDDLALSDGSMTTELCELTCLGSTYFATQYGRE------------------------------------------STPNPTPSPAATGPLALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRY-TDESTPTSSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            P SLGC+ DD +DRI+DD AL D SMTTELCELTC GS+YF+TQYGRE                                          ST  PTP+ +      +GC++DD +DRIM+       SMTTELCE TC GS YF+TQYGRECWCG AG DY  HGEST+CTY C G+ D+TCGGF AA+VY Y T E TPT S+VGC+QD+ D RIMELALT+SSSMT E+CE  C G+++F  QYGRE
Sbjct:   28 PLSLGCFNDDGDDRIMDDRALVDTSMTTELCELTCAGSSYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASAYAYSTVEPTPTFSY-----VGCFQDD-QDRIMELALTESSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTESSSMTTELCELTCAGSSYFSTQYGRE 269          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 3.310e-71
Identity = 110/120 (91.67%), Postives = 115/120 (95.83%), Query Frame = 1
Query: 1549 MTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGRE 1908
            MTTELCE TCLGSTYFATQYGRECWCGSAG+DYALHGESTDCTY CAG+ADQTCGGFDAANVYRYT+ESTPTSSFVGCYQDESDAR+MELALTDSSSMT EMCEAECTGN +FGMQYG E
Sbjct:    1 MTTELCELTCLGSTYFATQYGRECWCGSAGMDYALHGESTDCTYGCAGNADQTCGGFDAANVYRYTNESTPTSSFVGCYQDESDARMMELALTDSSSMTKEMCEAECTGNRYFGMQYGSE 120          
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Match: A0A6H5JX48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX48_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 1.270e-67
Identity = 138/268 (51.49%), Postives = 158/268 (58.96%), Query Frame = 1
Query: 1270 STTTGSTPDSLGCYEDDREDRILDDLALSDGSMTTELCELTCLGSTYFATQYGRE---------------------------------------------STPNPTPSPAATGP-LALGCYEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGVDYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSS----------FVGCYQDESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGR 1905
            S T  ++  +LGCYEDDREDRI+D+L LSD SMTTELCELTCLG+TYFATQYG E                                              TP+PTPSP   G  LALGCYEDDRE RIMD+L LSD SMTTE                   CWCGSAG DYALHGESTDCTY CAGDADQ CGGFDAANVYRYTD STP+ +           +GCY+D+ + RIM+  +   SSMT E+CE  C G+T+F  QYG+
Sbjct:  462 SPTEAASFVALGCYEDDREDRIMDELVLSDPSMTTELCELTCLGNTYFATQYGSECWCGSAGADYAVHGESTICTYACSGDADQTCGGYDAANVYRYTAEGTPSPTPSPTEAGSHLALGCYEDDREARIMDELVLSDSSMTTE-------------------CWCGSAGADYALHGESTDCTYPCAGDADQMCGGFDAANVYRYTDGSTPSPTPSPTEAGSHLALGCYEDDREDRIMDELVLSDSSMTTELCELTCVGSTYFATQYGQ 710          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9539.31152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE6_ECTSI1.760e-20757.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS2_ECTSI2.310e-11259.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS1_ECTSI8.000e-11138.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD7_ECTSI7.250e-8986.16WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
D8LEL0_ECTSI9.470e-8864.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEK9_ECTSI2.480e-7959.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD8_ECTSI3.130e-7486.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNS1_ECTSI3.140e-7153.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUE8_ECTSI3.310e-7191.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JX48_9PHAE1.270e-6751.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9539contigEcto-sp8_S_contig9539:2..7028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score454.9
Seed ortholog evalue2.4e-125
Seed eggNOG ortholog2880.D7FUE6
Model size1929
KEGG koko:K22017
Hectar predicted targeting categoryother localisation
Exons13
EggNOG free text desc.Sushi, nidogen and EGF-like
EggNOG OGsKOG4157@1,KOG4157@2759,KOG4291@1,KOG4291@2759
Cds size738
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145314.7624369-UTR-Ecto-sp8_S_contig9539:1..1821681145314.7624369-UTR-Ecto-sp8_S_contig9539:1..182Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 2..182 +
1681145314.7757125-UTR-Ecto-sp8_S_contig9539:425..5301681145314.7757125-UTR-Ecto-sp8_S_contig9539:425..530Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 426..530 +
1681145314.786451-UTR-Ecto-sp8_S_contig9539:543..7811681145314.786451-UTR-Ecto-sp8_S_contig9539:543..781Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 544..781 +
1681145314.7993352-UTR-Ecto-sp8_S_contig9539:1006..11971681145314.7993352-UTR-Ecto-sp8_S_contig9539:1006..1197Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 1007..1197 +
1681145314.8126314-UTR-Ecto-sp8_S_contig9539:1968..21571681145314.8126314-UTR-Ecto-sp8_S_contig9539:1968..2157Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 1969..2157 +
1681145314.8277612-UTR-Ecto-sp8_S_contig9539:2723..28501681145314.8277612-UTR-Ecto-sp8_S_contig9539:2723..2850Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 2724..2850 +
1681145314.8400428-UTR-Ecto-sp8_S_contig9539:3008..30941681145314.8400428-UTR-Ecto-sp8_S_contig9539:3008..3094Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 3009..3094 +
1681145314.852381-UTR-Ecto-sp8_S_contig9539:3526..36001681145314.852381-UTR-Ecto-sp8_S_contig9539:3526..3600Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9539 3527..3600 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145314.872117-CDS-Ecto-sp8_S_contig9539:3600..37861681145314.872117-CDS-Ecto-sp8_S_contig9539:3600..3786Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9539 3601..3786 +
1681145314.8838196-CDS-Ecto-sp8_S_contig9539:4453..45101681145314.8838196-CDS-Ecto-sp8_S_contig9539:4453..4510Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9539 4454..4510 +
1681145314.8993769-CDS-Ecto-sp8_S_contig9539:5251..53771681145314.8993769-CDS-Ecto-sp8_S_contig9539:5251..5377Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9539 5252..5377 +
1681145314.9133658-CDS-Ecto-sp8_S_contig9539:5923..59801681145314.9133658-CDS-Ecto-sp8_S_contig9539:5923..5980Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9539 5924..5980 +
1681145314.9263935-CDS-Ecto-sp8_S_contig9539:6426..66601681145314.9263935-CDS-Ecto-sp8_S_contig9539:6426..6660Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9539 6427..6660 +
1681145314.942932-CDS-Ecto-sp8_S_contig9539:6950..70281681145314.942932-CDS-Ecto-sp8_S_contig9539:6950..7028Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9539 6951..7028 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9539.31152.1prot_Ecto-sp8_S_contig9539.31152.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9539 3601..7028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9539.31152.1

>prot_Ecto-sp8_S_contig9539.31152.1 ID=prot_Ecto-sp8_S_contig9539.31152.1|Name=mRNA_Ecto-sp8_S_contig9539.31152.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=246bp
MDEAPPTPSPVEWRTQPPTPSPTPGSSTTTGSTPDSLGCYEDDREDRILD
DLALSDGSMTTELCELTCLGSTYFATQYGRESTPNPTPSPAATGPLALGC
YEDDREDRIMDDLALSDYSMTTELCEQTCLGSTYFATQYGRECWCGSAGV
DYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQD
ESDARIMELALTDSSSMTMEMCEAECTGNTFFGMQYGREVRGGSL*
back to top

mRNA from alignment at Ecto-sp8_S_contig9539:2..7028+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9539.31152.1 ID=mRNA_Ecto-sp8_S_contig9539.31152.1|Name=mRNA_Ecto-sp8_S_contig9539.31152.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7027bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9539:2..7028+ (Ectocarpus species8 EcLAC_412)
CTGACCGAGACACAGGATCACTACTACTGGTATTTTTGGGTTATTCTTGA CAACTGCGACACCGCCTACACGTGGAGCGACAACTTCGTCCAGCTTTCCT ACGTCGACGACGAGCAAAATATCATCGACCTCTCCGGCTTTGAAGATCCT AACATCGATGAGACTGAAACCGGGATATGTTGTGAGTACCGTTGAAGAGG TTGTGCCAACTCAAGCATTGCCGTTCGTAATGAATTGCTCGCCCCTCATG CCTTCGTTCCACTGGAACCCTGTAAAGTTTTGTGCTTTAGAATAGCTCAC CGTCTGTGCATGTTTCCTGAAGCCGAAAACATTTCAATGCAAGATCAAAA GCTACGGCAGCCCGATGCTTTCCTACCTCCACTTGACATGCGCGTGTATT TCGCGCTTCTTCCTGTCCTGGCAGCCACTCCTAGCCCGGTCGCGCCAACG CCTGTGACCGACGCCACCCCTGCCCCCACCCCTGCCCCGACCATGCGTGG TGAGACAGTGATGAATGTATTGTCATGCAGTAGACTTGGTAGGTCGCAGT GTCGGGCCATACTCAGACTGTCGTGTGCATGCACATGATGTCAATCAACG CTTCGGATCGTTTTGTCTGCAGAGCTCCTGCCGACGCTGTTCTTCAGCAG CAATGCCTAGAGCAGGTTTTGCGCTTTATGGAGTTGTAACCACGAGAAGG GAGAACCACAAGCAAGCTAAGCTAAACGACGCTGTGTATCATCACATCTA TTCTGGGCGCCAGAGTCGATACCCTTGGGCGTAAAATTTGTGCGGATGCA CCAGCCGGGACCAAACATGAGGAGGGTCATGCAGTACAATAGGCTGTGAT GTATTTTCCACTTAGTTCCTTCTACGGTGCTTGCCATATTGATGAGTATG GAAAGATGGCAGCCCTCTTCAACTGCTTTATCGTATTGTGTATACTCAGA ATATTTCGGAATGCCTCTCAAATTCGAAACCTAACCCTAAGGTATGCCGT GAGAGAGCAAAGTCCGGTCGTGTGACTTCAACTACGAGATGCGCACTCCA GGTTTTCCAGCTGGGGTGGTTGGGTAGATTTACTAAACAGCTTTTCGCCC TTCTACATCGGGGGCGTCTACGTGTACGCGCCACTCGACATGCCCACGGT CGGCGTTCTCGGCACCAACAACGGCAACAGAGCCGACGATTGGACGGTGA GAACAACGTCGGTCGATGAATAGTCACATTTCGTTGGCGAGAGTGGGTGG GGATATTTCAAACAGCGCAAGTTTTCGCGGTGAGCCTGTGGCAACGGGTT TGGTTCTTTGCTGTATTGGAATGGTTGCAGAATCATCCACCATGCCGCCC GGATGTCGCACAAAGCGATCGTCTCAACACATGAGTGCACCGACTTCTGT GAACATTTGGTGGATCTAGAACATAAGAGCAGCGCTCATAAGGGCAAGAT ACGGGCTGCCCACTGCACGGACGTCAGTTCATGATTGTGTTTGTGTTGTG TATCGGTTTTGGCTCTGAACCTGCCGATTGAGGTATATCGCCATTTCTTT CCGACGACCGATGTCGTTGCTGGGAGGTATCCGCGTTCGTCAGTCACTAG TTACCGGTCACCGGTACCCTGCTTATCCACAAGCTAGATGCGGCAGTTTA TGCTGCACCCTGCATACATAGGTCTACTAGATTTCGTATTTGCGTACACA AGCGCTCTGGCTGTTTTAGGTATCCACACAAACTCTGCTTCTAAATATGG ATCTCCGCGAGGCCTTTTGCCTCTCACTTAGCTCTGGCATTCTCTATCCC CGTTGTCAAGAGACCGAACGTTTTGGGCAAAACATCCGATCGAACATCAG CGGTATATTCTTCATATGTTGTCGCTCTCTGATGCGTTTCCTGAAGGCTT CGTGGCACCCTCCTACACAGCCCCTTGTCAATTTAGACCGCTGTACTTGG TTCCCCTCTCACCGCAGGACTCCTCAGGCGAGACGATTGATGCGGGATCG GTGTCTGTCGCCGAAGGGTACAACTACTGCACATCCAACTGGGAAGCGGA AGAGAGCCTGCTTACAACATCCTCGCGCCTCCGTTCGCGCCGCTTGCAAA CCAGCGACTACGTCGCGCCAGTGATCCCAGATCTCATCCCCACCGATGTG GAAGAGGTACGCACAACACTATTTCGGATGATACTTTGGTCAAGCGCAGT GCAAAGCTCAGCTTCAACGCTGCTTCGAAATGGAATTGTGTAGTGTTCTA AGCTTGGTCCCGAAGTCGGTCGATGGCTCACTCGCACCTGCTGTCTAGTA TTGTTTGTTGTGCGTTTTCCACATTTCGGCGAGTGGGTTCGTCGTTGGAA ATGGCGAGTCCTCTACTGTAGGAACCACACCCCACGTTCCAATATCGCGC GAACAACATGAGGTTGGGGTTTGGCCCTTTCTTCTGTGGGTGGTAGTCGA CATCAGACCCGGTGTTGCCTGTGACGTTTCCACATAGACAGTGATCGGCA AGTCAAACACCCACCGCCTCCAAAGCCAAGAGTTGCCTTGCTGCTTAAAT ATAATGAACCCCGGTACTATGTCATAGCGAGTACGATGTGCTCTTCGCTT CACATTATTCTCAATGGGTTATTATTGCGGGGCGAACCCCGCTCCATCAT CCGAGGTCGATCATCCACTGCTATCGCCCGTCACCGGCGGCTCTTCCCCC CCCCCCCCTCGGTTTTGAACAGCTGTGTGGCGATAACACCGAGTGCATCT TCGACGCGATCGTCGTGGGCTTGGATGTGGGAGCTGCCACCCTTGAAGCC GCCGAAGAATTCGAGACTGAGGTTCAAGCAGCTGGCGGTGGTAAGCTGAG TTGGTTTTTTTCCTTCATTAATATTTTATGATAGGCTGGACGTACACTGT CCCTTGACACGCGCCTCGTACCCATTCGTACGCCTAATACCACCTCTTTC GCTCTCTCTTCCTCTCTCTCGGTCGCGTCAACACAACCCCGACGGACGTG TGCGAAGAAAACACCTTTAGCAGCGACGGCTTGTCTCCGTGCACGACTGC CCAGACGGAGAAACCTCTGGCAGGGGCGCCGTCGTCTGTGAAGGTACCGT GTTTGGTCACCATAGATGTGTCTTGTACCACGTCCGGTAACAACGAAAGA CGATCTGTTCACGAGCGGTTTAAGCCAAAGCCCGGCCCGGTACGATACAG TAGAAAATGTTTGCTGGACAAGAGAATTTTGGGATCGAGTTGCCCATGTA GTGTACACACGACTGATACATGGGACTTCGTATCAATATCTTTCATAGAT TGGCAGCTTGATGAGTTACTTGAAGGGTTAGACTACACCGCGTGGCTGCA AGACGTAGAAATATCTAACACTGAATTGGAACATCGATTTACCCATGTGC GTTAAGCCGTTATGATCGTCCAGCAACGCCATTTTCTGCTATAATGTAAA CAGTGGCTGCGTTCGAATATATATTTTCCCTCCCACCCTTGCCGATCCGT TGTCCTCCGTCCAATCTTTATGAAGCGGTTTCGACGCCCAGCCCCACTGT GGTTGAAGAGCCTCCTACTCCCAACCCCACGCCCGGCCCCACTCCAGTTA TGGATGAAGCGCCTCCTACTCCCAGCCCCGTCGAATGGCGCACACAACCT CCCACTCCCAGCCCCACTCCTGGCTCATCAACTACGACGGGCTCGACCCC CGATTCGCTCGGGTGCTACGAGGACGACCGCGAAGACCGTATCCTGGACG ATCTCGCTCTTTCCGACGGCTCCATGACAACCGAGGTGACTAGATCGTTG TGACAAACTTATCGCAGTGTTAATGGTTTTTCTAGAGACGGAGAGACACA GAGGCATGCTTGTGGGGATTTCAACGTCATCACAGATCGGGCCGGCTCTT AACCTGAACACCACAACACCAACAACACCAACAACAACAACAACGTCCGG GCTCGAAAAATCGGAACTCTCTCCCTGGCTGATGGAAGGATATCGTGCCA AGCACGCGAGTGATAACTGATGTTCTTACTGAACTGTTACAGGATACATT TTCAGGTTCTGGCCACCGGTCACCCTACGCAGAAAACAAGCGCCCTACCT TCATGGTGATCACTCATGCATGCCCCTACGTGCGACGTAGAAGGCCGGCC ACGTTGGGGGTTTCATTCCATGGGAACAAGCAGTCTCCTTATGTGTTATC ATGATGATGTTGTGTGTCTATTACAAAATGACCAACGTACTGAGTGTCTA CCACCAAAGCAAGGACTACGCTCCTGCAATGTACGTTGTGCACCTCTAGT AGTTGAGAGCGGTGTGAACCCTGTTCTGTAGCCATGTCATTGACCAATGG CTTTCTCTCTGCGTCGTGCTGAAAAAGCACGTCCCTGTGTTTATTTGCCG CGGTCCCGTCCCGTCCCTGCCGTATTGTGCCGTTACGTGGTTCTGACATC AGCTGTGCGAGCTGACATGCCTCGGAAGCACCTACTTCGCCACCCAGTAC GGGCGAGAGGTGAGTTCGGGTGAATAGCAAAGAGCATGGCCCTACCAACG CTTAATTATTTTGTGTGGCGAACGTTTTTCATTACACATCGAATCCATTT TGGATGCGTGAAGTCAGAACTTCGCCTTCCTGCGATAGGGCCGAATTGCG TTCAACATGTACACACCGAGGTCAAGCAGACGCTCATACCATATCTATCG CAAGCCGTTTGAAAAACTGACCGCGACGGTCGAGTTGGACGTTTGGCAGT CCTCCGTACGTTTGCGAATGTATGTGTGTCGATCGAAAGACATGGTACGC ACACCAAGAGACGCCCGAATGGGGCCCAGAATTGTTGCCGATGTGGATAA ACTAGTAACGACGACGACGACGACTATGACGTTAAACAGCATGTATTGCA TGGCAAGAGCACTGTAGACTGTTCTGAGGCAGGTTTTCCTCAGGGGTGAG ACGAACGGCTGCCCGTCGTCCTGGTCCTATGGTATGGCCAAGCTTTCTTC GTCACTACCGAAAACGACATGTGTTTGTTGCCTCTGCCAAACGCCTTCTC GGCCCGACCCCCCACATCCCGTCCGTTCATCTGTGCTGCCTCTTAACTGA AAAAAACATTCACAGTGTTGGTGTGGTTCGGCTGGTGTGGACTATGCTCT GCACGGCGAGTCCACCGACTGCACCTACGCCTGTGCAGGAGACGCCGTCC AAACATGCGGCGGGTTCGACGCCGCCAACGTCTACCGCTACACGGATGAG AGCACTCCCAATCCCACTCCTAGCCCCGCGGCAACAGGCCCTCTTGCACT TGGGTGCTACGAGGACGACCGCGAAGACCGTATCATGGACGATCTCGCTC TTTCCGACTACTCCATGACAACCGAGGTGATTATATCGTTCATGCATATT GTTTTGGTTTCCCCTCCTTTCATGACTGAAAAATGTTTGGTTCGTGGGGG GGTGGACAACACTTACAGGTACGCCCAAAAGTACTTTGCCGCAGATGAAC AGGCGTACTTCATGGTTGTGAGGCCTATCCTCACAATGTGGCATGGTTGG AGTTTCTTCAAAAAGATCCCAACATGCGGTAACAGCATTGTGGGTGACAC ATTTCGTTCACACCCGTCCGCTCGTACATCTACCGTTGTTGGCCATGTAT CAGTCACCGTAAACAACACCAAACAATCCCCTGCACGGGTCCCCCAGACG ATCGGTTTCGTTAAAGGGTTGCAACTAACGTACGTTGAATGGCCAAAGGA TGAACGGTCTCGTCTCCATTTTTGCTCCGGCATGAACGCCTAACGAATAC GTTTCGTTTGATGCACTTGAGAGAGTTCACCTCGAAACGTGTCCGAGCCG TCAAGTTACATAGTTCACGCTCCCTTTGTCTCTTGTCGCTGTCGTTTTCT TCCATGACGTGTCTAATAACAGCTGTGCGAGCAAACATGCCTCGGAAGCA CCTACTTCGCCACGCAGTACGGGCGAGAGGTGAGTAAAGATAGATGGCAG TTTCGTAAACAACCATATTTTCCTCGCGTTAGGGCTAAACCCTAACCCCA CTACATACCAACTTGTATCATATTTTGAGACTGCACCGTCGTTAAGGTTA TGTGACCACCGTAGGGATAATAGTATTTGGCGTTTATATCAGCGTTTTGT ATATAGCAGAGTTGCTGACGAAAGCGGCTGGGGTGAGAATCGTACCCCGA TCCAACACAATTTTCATTTTTTTCACTACAATATTCCCAAACATTACGCG ATGAATGATGTTCTGAAATCCCTCACTGAACCCTTCCTACGAGCATTGGG ATTCCGAGGTTTTACCCGTTCGACTGCCGGTATGGCCGAGCTTTTCGCGC CTCGACCAAACGCCACGCCCTGTCGGCCTGTTTGCATGTCTGTGTTGCCC CTACACCTGAATAAACCACACACAGTGTTGGTGTGGTTCGGCTGGTGTGG ACTACGCTTTGCACGGGGAGTCCACCGACTGCACCTACGCTTGCGCAGGG GACGCTGACCAAACGTGTGGCGGGTTCGACGCCGCGAACGTCTACCGCTA CACGGATGAGAGCACTCCCACATCATCGTTTGTCGGGTGCTATCAGGACG AGTCGGACGCCCGCATCATGGAACTCGCGCTGACGGACAGTTCTTCCATG ACCATGGAGGTGCGGAGGGGGTTGTGCTAGGTTGTAGTCTGATCGGCAAT AGTTCTTGCACATGTAAATATGCTCTCTTGTTGTGTCCAATGCTTAAGAT ATATTGCGGTCAATCTTCTTGATGTGCCAAGTGCTCGACAGAAGCACGCG CCTACCTCGTAGGTGGGTGAACTCAATGCTGTTCCGATGTCAAACAGCTG GTGTTGAAGTCTCAGCAGTGAGATATTCCTTGTCGACGTTCATAACATTT TCTGCCCTTCCCCCTGGTGTGATGGCTTGTGTATCGGTTGTGCTTGCAGA TGTGCGAGGCGGAGTGCACCGGAAACACATTCTTCGGCATGCAGTACGGG AGGGAGGTGAGAGGCGGTTCCTTGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9539:2..7028+

>mRNA_Ecto-sp8_S_contig9539.31152.1 ID=mRNA_Ecto-sp8_S_contig9539.31152.1|Name=mRNA_Ecto-sp8_S_contig9539.31152.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=738bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9539:2..7028+ (Ectocarpus species8 EcLAC_412)
ATGGATGAAGCGCCTCCTACTCCCAGCCCCGTCGAATGGCGCACACAACC
TCCCACTCCCAGCCCCACTCCTGGCTCATCAACTACGACGGGCTCGACCC
CCGATTCGCTCGGGTGCTACGAGGACGACCGCGAAGACCGTATCCTGGAC
GATCTCGCTCTTTCCGACGGCTCCATGACAACCGAGCTGTGCGAGCTGAC
ATGCCTCGGAAGCACCTACTTCGCCACCCAGTACGGGCGAGAGAGCACTC
CCAATCCCACTCCTAGCCCCGCGGCAACAGGCCCTCTTGCACTTGGGTGC
TACGAGGACGACCGCGAAGACCGTATCATGGACGATCTCGCTCTTTCCGA
CTACTCCATGACAACCGAGCTGTGCGAGCAAACATGCCTCGGAAGCACCT
ACTTCGCCACGCAGTACGGGCGAGAGTGTTGGTGTGGTTCGGCTGGTGTG
GACTACGCTTTGCACGGGGAGTCCACCGACTGCACCTACGCTTGCGCAGG
GGACGCTGACCAAACGTGTGGCGGGTTCGACGCCGCGAACGTCTACCGCT
ACACGGATGAGAGCACTCCCACATCATCGTTTGTCGGGTGCTATCAGGAC
GAGTCGGACGCCCGCATCATGGAACTCGCGCTGACGGACAGTTCTTCCAT
GACCATGGAGATGTGCGAGGCGGAGTGCACCGGAAACACATTCTTCGGCA
TGCAGTACGGGAGGGAGGTGAGAGGCGGTTCCTTGTGA
back to top