mRNA_Ecto-sp8_S_contig9531.31138.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: D7FPT4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT4_ECTSI) HSP 1 Score: 269 bits (687), Expect = 1.090e-79 Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 1
Query: 7 GLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASE 591
GLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA+E
Sbjct: 100 GLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKATE 294
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A6H5L7J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J2_9PHAE) HSP 1 Score: 268 bits (686), Expect = 1.500e-79 Identity = 190/202 (94.06%), Postives = 191/202 (94.55%), Query Frame = 1
Query: 7 GLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFV 612
GLESLNITECGLETT+GLEGLT XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARF
Sbjct: 132 GLESLNITECGLETTKGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNQLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFA 333
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A7S3G5L8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G5L8_9EUKA) HSP 1 Score: 119 bits (298), Expect = 7.540e-31 Identity = 55/120 (45.83%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 238 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQ 597
+ +G L + L E+ L+ N++G FKE+ LA L+ LR+L L D FGDNPVC L NY+TY +HL QLTSLD ++ +++K A T ++KK MYYNMR + +KR+ +++RKA E++
Sbjct: 21 IERVGSALEVNTCLTELGLSDNKIGHFKEIPNLARLKSLRTLVLSDSDFGDNPVCSLCNYQTYAMFHLKQLTSLDCLLLLDDTKVLAETTYMKKKMYYNMRIKTLKRNTSNIMRKAQEAR 140
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A2R5G831_9STRA (Leucine-rich repeat-containing protein 9 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G831_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.960e-26 Identity = 60/118 (50.85%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 238 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASE 591
++EIG L +LRE+NLA N+L FKE+L LA L L LTL D HFG NPVC LSNY+TY+ HL L S D + EE K + F KK MYYNMR + +KR+ +V+RKA +
Sbjct: 172 ISEIGTSLDKLHSLRELNLAENELRTFKEVLNLARLPKLDQLTLNDPHFGSNPVCLLSNYRTYILCHLRSLNSFDGSRIDEEIKLVTDATFYKKRMYYNMRIKTLKRNMTNVLRKAKD 289
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A7S1C613_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C613_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.250e-25 Identity = 56/123 (45.53%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 238 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRAR 606
+T IG L L +NLA N +G FKE+ LA + LR L + HFGDNPVC L NY+TYV Y L + +LD ++E+SK A ++KK MYYNMR + +KR+ +VIR+A+E+ + R
Sbjct: 152 ITAIGTALDRNTCLTSLNLADNGIGYFKEIHNLARVPSLRHLCFSEPHFGDNPVCNLCNYQTYVLYQLPHVDTLDTVALAEDSKQLAEATYIKKKMYYNMRIKTLKRNTTNVIRRATEALQGR 274
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A7S1DL50_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DL50_HEMAN) HSP 1 Score: 109 bits (273), Expect = 1.350e-25 Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 238 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRAR 606
+ EIG L ++ E+NLA N L FK+LL L LR L+ D +GDNPVC L NY+TYV +HL QL+ +D + EE K A ++KK MYYNMR + +KR+ +++RK E+ ++R
Sbjct: 154 IREIGSSLDHNSSMVELNLAGNSLWSFKDLLNLTRCASLRKLSFSDPDYGDNPVCELCNYQTYVFFHLQQLSHMDTMPIPEEGKHLAEATYMKKKMYYNMRIKTLKRNTTNILRKGREALQSR 276
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A7S4J9W0_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4J9W0_GUITH) HSP 1 Score: 105 bits (261), Expect = 1.430e-25 Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 244 EIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRK 582
EIG L L E+NLA N+L FK+LL + LR L D +GDNPVC L NY+TYV +HL QL+ +D + EE K A ++KK MYYNM+ + +KR+ +++RK
Sbjct: 6 EIGSSLDSCTNLSELNLAGNELWSFKDLLNITRSTSLRKLAFNDPDWGDNPVCDLCNYQTYVFFHLQQLSHMDTLPIPEEGKQLAEATYMKKKMYYNMKIKTLKRNTNNILRK 118
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A7S0V6C4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V6C4_9CRYP) HSP 1 Score: 112 bits (279), Expect = 3.880e-25 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 238 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRAR 606
+ EIG L ++ E+NLA NQL FK+LL L LR L+ D +GDNPVC L NY+TYV +HL QL+ +D + EE K A ++KK MYYNMR + +KR+ +++RK E+ ++R
Sbjct: 154 IREIGSSLDHNSSMLELNLAGNQLWSFKDLLNLTRCASLRKLSFNDPDYGDNPVCELCNYQTYVFFHLQQLSHMDTMPIPEEGKHLAEATYMKKKMYYNMRIKTLKRNTTNILRKGREALQSR 276
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A7S0QTT4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTT4_9CRYP) HSP 1 Score: 110 bits (276), Expect = 4.510e-25 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 238 LTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASES 594
+ +G+ L +L E+N+A NQ+ FK+LL L LR L D +GDNPVC L NY+TYV +HL QL LD + EE K A ++KK MYYNMR + +KR+A ++IRKA+E+
Sbjct: 136 IRNLGNDLDNCVSLVELNIAGNQMWSFKDLLNLTRASSLRRLAFSDCDYGDNPVCDLCNYQTYVYFHLPQLQFLDTLPIPEEGKILAEATYMKKKMYYNMRIKTLKRNASNIIRKATEA 254
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Match: A0A0M0JS56_9EUKA (Leucine-rich repeat-containing protein 9 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JS56_9EUKA) HSP 1 Score: 109 bits (272), Expect = 5.440e-24 Identity = 49/121 (40.50%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 247 IGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARF 609
+GD L + L ++NLA N L FK++ L + L + + + HFG+NP+C L NY+TYV +H+ QL LD +V++E +A A ++KK MYYNMR + +KR+ +V+RKA+E ++ +
Sbjct: 186 VGDALTCNQNLEDLNLAGNLLANFKDVPTLGRMRKLTKIAMSEPHFGENPLCSLCNYQTYVLFHMPQLQQLDSMLVTDELRALAEATYMKKKMYYNMRIKTLKRNTSNVLRKATEVRQTKI 306 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9531.31138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9531.31138.1 >prot_Ecto-sp8_S_contig9531.31138.1 ID=prot_Ecto-sp8_S_contig9531.31138.1|Name=mRNA_Ecto-sp8_S_contig9531.31138.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=208bp VAGLESLNITECGLETTEGLEGLTGLTALHLSSNHLQSLDGVGGMTRLKKback to top mRNA from alignment at Ecto-sp8_S_contig9531:960..2232- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9531.31138.1 ID=mRNA_Ecto-sp8_S_contig9531.31138.1|Name=mRNA_Ecto-sp8_S_contig9531.31138.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1273bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9531:960..2232- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9531:960..2232- >mRNA_Ecto-sp8_S_contig9531.31138.1 ID=mRNA_Ecto-sp8_S_contig9531.31138.1|Name=mRNA_Ecto-sp8_S_contig9531.31138.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9531:960..2232- (Ectocarpus species8 EcLAC_412)back to top |