mRNA_Ecto-sp8_S_contig9510.31090.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE) HSP 1 Score: 422 bits (1085), Expect = 6.550e-137 Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVTQKVGEAEAFNVREAFLGGETGR 643
SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRH H+HGLGGLLPDTVDYQIKGLTDGNRLSVFV+CQQRENSANMGRRFGNS+LFHKLLARECNRHGISYTLPAQPLV QK GEAEAFN+REAFLGGETGR
Sbjct: 816 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPLVAQKGGEAEAFNIREAFLGGETGR 1029
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI) HSP 1 Score: 391 bits (1004), Expect = 2.340e-135 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 2
Query: 65 KAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVTQKVGEAEAFNVREAFLGGETGR 643
+AYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMK+GIAAGLRRGRHRHKHGLGGLLPDTVD+QIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLV QKVGEAEAFNVREAFLGGETGR
Sbjct: 11 RAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHKHGLGGLLPDTVDFQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEAEAFNVREAFLGGETGR 203
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.940e-29 Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLL----PDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQ 565
SFLFGSSA+ FFES VF+FVT+AYDVGD VY D+ E Y+V RINMLTTVFRRWD T++ N +AK+ IRN RS + + VS+ TP KL+ +K + + + G L P++VDY + + + VF + Q+ + + + N L LA C+ G+ Y LP Q
Sbjct: 945 SFLFGSSAANFFESCVFIFVTRAYDVGDRVYIKDELNDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKERM--------QEYARAVTGPLYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQ 1128
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE) HSP 1 Score: 105 bits (261), Expect = 2.790e-21 Identity = 64/195 (32.82%), Postives = 109/195 (55.90%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDD--TGGEDWY--IVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLV 574
SF+ G++AS +++F+FV++ YDVGD V+ DD T G + +VT++++ TT FRRWD Q I N+++A+K I N R++ H I V+ T KL+ + N + ++ K GL P + + + G+ D RLS+ ++ +QR N +M +++ S+ + C+ GI+Y LP P+V
Sbjct: 972 SFMIGTAASNLMTAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKK-----KDKPEGLYP-RMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVV 1160
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: D7FX36_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX36_ECTSI) HSP 1 Score: 103 bits (258), Expect = 6.630e-21 Identity = 63/195 (32.31%), Postives = 108/195 (55.38%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDD--TGGEDWY--IVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLV 574
SF+ G++AS +++F+FV++ YDVGD V+ DD T G + +V ++++ TT FRRWD Q I N+++A K I N R++ H I V+ T +KL+ + + + ++ K GL P + + + G+ D RLS+ ++ +QR N NM +++ S+ + C+ GI+Y LP P+V
Sbjct: 831 SFMIGTAASNLMSAVLFIFVSRLYDVGDRVHIYDDVQTAGVEPMNVVVVKVDLRTTSFRRWDEQIFYIPNHLLADKTIVNIQRTAHQWHEFYIHVAATTSSQKLETLHDALQKFAKK-----KDKPEGLHP-RMGFSLTGIEDSTRLSIRIIFRQRGNWQNMDKKWACQSMCTWAIKNACDTIGITYYLPEVPIV 1019
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A5C3EGN5_9BASI (EF-hand domain-containing protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EGN5_9BASI) HSP 1 Score: 96.7 bits (239), Expect = 1.850e-18 Identity = 64/191 (33.51%), Postives = 93/191 (48.69%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMA-KKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPL 571
SF+FG+SA FES++F+F T YDVGD V E+W V +L+T FR Q + N ++A KK I N RS TMI VS DT +E L+Q++ A LR + GG L D +T N + + V + + N + G R+ + + + C GI Y++P QP+
Sbjct: 628 SFIFGNSAKNIFESMIFIFATHPYDVGDLVCI-----DEEWMFVKEFGLLSTTFRTTVNQEVVAPNAMLATKKYIYNSRRSGAQWEFTMIQVSFDTSLETLEQLR----AKLRAWTKENDREFGGPL----DVNFNSITQQNAVELIVAFEHKSNWQDWGARWERRTKLMRRIKTACEELGIVYSMPPQPI 805
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A835YTT2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.320e-18 Identity = 61/197 (30.96%), Postives = 99/197 (50.25%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKG-LTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVTQKVG 589
SF+F +SA ES VF+FVT+ +DVGD V+F DD G ++ ++V RIN+L+TV +RWDGQ + N +A + IRN RS + + V D E L + ++ + A R H L+PD++ + G L V V Q ++ + R+ + ++ ++ LP QP++ + G
Sbjct: 471 SFVFSTSAQGLCESFVFIFVTRPFDVGDGVHFRDDMGQDNVFVVHRINLLSTVLKRWDGQYVVWPNRFLALREIRNMRRSGPQSNTLTVFVRRDASAEALARYRDALRAAARAAPRDHA-----LVPDSIGAAFRADAGGGTALEVCVSYTQVQSWQDANERWRTHAFLARVALTLRASLALAPDLPTQPVLLRGSG 662
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.640e-18 Identity = 63/190 (33.16%), Postives = 97/190 (51.05%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVD--DTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQ 565
+F+FGS+A+A ESI+FVFVT AYDVGD + D T V +IN+LTTVF R DGQ+ ++ N ++++ A+ N RS ++ VS TP+ KL +K + H +G + + D +L V + Q R N ++ RR+ + + +A C GI++T P Q
Sbjct: 782 TFMFGSTATALVESIIFVFVTSAYDVGDRLMIPDIMQTSRYHGCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFANEDSSGIYHKIG--------FTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGITFTPPVQ 963
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A167LJ94_PHYB8 (EF-hand domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167LJ94_PHYB8) HSP 1 Score: 94.7 bits (234), Expect = 8.590e-18 Identity = 60/194 (30.93%), Postives = 98/194 (50.52%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVTQK 583
SF+FG+SA FE+I+FVFVT +D GD V+ G E+W +V + +L T F +WDG N+I+A + I N R+ R I V TP K++++++ + + + PD+ I + NR+++ + +N + G R+ + + L C R GISYT+P QP+ +K
Sbjct: 686 SFVFGNSAKDAFEAIIFVFVTHPFDAGDRVFI----GSENW-VVNNVGLLVTTFNKWDGSIVYAKNSILATQYIINCRRTGRTCEGIDIHVHFSTPGWKINRLRDEMFEWSNKFPKLYT-------PDSTSANIISFENLNRITISFYFEHTQNWQDAGGRWMRHNNYMMELKETCERLGISYTMPNQPVDLKK 867
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Match: A0A4S4KV34_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4KV34_9APHY) HSP 1 Score: 94.4 bits (233), Expect = 1.360e-17 Identity = 62/204 (30.39%), Postives = 101/204 (49.51%), Query Frame = 2
Query: 2 SFLFGSSASAFFESIVFVFVTKAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMA-KKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHKHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVTQKVGEAEAFNV 610
SF+FG SA FES++F+F T +DVGD V +DD V + +T FRR DGQ + N+++A K + N RS+ T + VS DTP+E ++ ++ + + ++R + L D ++YQ N + + V + R N + G R+G +LF + L I YT+P QP++ +N+
Sbjct: 1819 SFIFGHSAQTLFESLIFIFSTHVFDVGDLV-LIDDQP----LFVREFGLFSTTFRRVDGQEVIAPNSLLAGSKLVHNLRRSNSMWETTNLTVSYDTPLESIETLRKRLEEYISDEKNRREWSNVNLNIDKMEYQ-------NAIYLVVGMEHRPNWQDWGGRWGRRTLFMRHLKTVLEELDIRYTMPVQPVLMPNAPVPGGYNL 2010 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9510.31090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9510.31090.1 >prot_Ecto-sp8_S_contig9510.31090.1 ID=prot_Ecto-sp8_S_contig9510.31090.1|Name=mRNA_Ecto-sp8_S_contig9510.31090.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=167bp MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEback to top mRNA from alignment at Ecto-sp8_S_contig9510:4549..7206- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9510.31090.1 ID=mRNA_Ecto-sp8_S_contig9510.31090.1|Name=mRNA_Ecto-sp8_S_contig9510.31090.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2658bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9510:4549..7206- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9510:4549..7206- >mRNA_Ecto-sp8_S_contig9510.31090.1 ID=mRNA_Ecto-sp8_S_contig9510.31090.1|Name=mRNA_Ecto-sp8_S_contig9510.31090.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9510:4549..7206- (Ectocarpus species8 EcLAC_412)back to top |