mRNA_Ecto-sp8_S_contig95019.31077.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig95019.31077.1
Unique NamemRNA_Ecto-sp8_S_contig95019.31077.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: UPI000C767C83 (adenosylhomocysteinase-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C767C83)

HSP 1 Score: 208 bits (529), Expect = 1.560e-63
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            LEEN K KTNIKPQVD+YTL NGKN++LLAEGRLVNLGCAMGHPSFVMS SFSNQVLAQ+ELWC+  KY VGV MLPK+LDEEVA SHL AL IKLT LS +QSEYLG+P++GP+KPDHYRY
Sbjct:  311 LEENAKCKTNIKPQVDRYTLSNGKNILLLAEGRLVNLGCAMGHPSFVMSNSFSNQVLAQMELWCNPGKYEVGVFMLPKRLDEEVAFSHLAALDIKLTTLSADQSEYLGIPVEGPFKPDHYRY 432
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A553P6V7_TIGCA (Adenosylhomocysteinase n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P6V7_TIGCA)

HSP 1 Score: 207 bits (528), Expect = 2.200e-63
Identity = 97/122 (79.51%), Postives = 111/122 (90.98%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            LE+NC  KTNIKPQVD+YTLQNGKN++LLAEGRLVNLGCAMGHPSFVMS SFSNQVLAQI+LW +  KYP+GVHMLPK LDEEVA SHL AL I+LTKLS++QS YLG+P++GP+KPDHYRY
Sbjct:  311 LEDNCVKKTNIKPQVDRYTLQNGKNILLLAEGRLVNLGCAMGHPSFVMSCSFSNQVLAQIDLWTNPGKYPLGVHMLPKLLDEEVAKSHLEALDIELTKLSSDQSSYLGIPVEGPFKPDHYRY 432
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A834DP47_9CHIR (Adenosylhomocysteinase n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A834DP47_9CHIR)

HSP 1 Score: 195 bits (495), Expect = 4.400e-60
Identity = 91/122 (74.59%), Postives = 105/122 (86.07%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            L EN   K NIKPQVD+Y L+NG+ +ILLAEGRLVNLGCAMGHPSFVMS SF+NQVLAQIELW H +KYPVGVH LPKKLDE VA +HLG L +KLTKL+ +Q++YLG+P DGP+KPDHYRY
Sbjct:  168 LNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPRDGPFKPDHYRY 289
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: UPI0018866739 (adenosylhomocysteinase-like n=1 Tax=Falco rusticolus TaxID=120794 RepID=UPI0018866739)

HSP 1 Score: 190 bits (482), Expect = 3.670e-59
Identity = 89/122 (72.95%), Postives = 104/122 (85.25%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            L EN     N+KPQVD+YTL+NG+++ILLAEGRLVNLGCAMGHPSFVMS SF+NQVLAQIELW H++KY VGVH LPKKLDE VA +HL  L +KLTKLS +Q++YLGL  DGP+KPDHYRY
Sbjct:   88 LNENAVEAVNVKPQVDRYTLRNGRHIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHSDKYAVGVHFLPKKLDEAVAAAHLDKLCVKLTKLSDKQAKYLGLSRDGPFKPDHYRY 209
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A1A6GGM8_NEOLE (Adenosylhomocysteinase n=1 Tax=Neotoma lepida TaxID=56216 RepID=A0A1A6GGM8_NEOLE)

HSP 1 Score: 196 bits (497), Expect = 8.240e-59
Identity = 90/122 (73.77%), Postives = 106/122 (86.89%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            L EN   K N+KPQVD+Y L+NG+ +ILLAEGRLVNLGCAMGHPSFVMS SF+NQV+AQIELW H +KYPVGVH LPKKLDE VA +HLG L +KLTKL+ +Q++YLG+PIDGP+KPDHYRY
Sbjct:  305 LNENAVEKVNVKPQVDRYWLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAKYLGMPIDGPFKPDHYRY 426
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A852IZ87_9PICI (Adenosylhomocysteinase (Fragment) n=11 Tax=Sauria TaxID=32561 RepID=A0A852IZ87_9PICI)

HSP 1 Score: 193 bits (490), Expect = 9.110e-59
Identity = 90/122 (73.77%), Postives = 105/122 (86.07%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            L EN     N+KPQVD+YTL+NG+++ILLAEGRLVNLGCAMGHPSFVMS SF+NQVLAQIELW H++KY VGVH LPKKLDE VA +HL  L +KLTKLS +Q++YLGLP DGP+KPDHYRY
Sbjct:  214 LNENAVEAVNVKPQVDRYTLRNGRHIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHSDKYAVGVHFLPKKLDEAVAAAHLDKLCVKLTKLSDKQAKYLGLPRDGPFKPDHYRY 335
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A8J6GDI5_MICOH (Adenosylhomocysteinase n=3 Tax=Eutheria TaxID=9347 RepID=A0A8J6GDI5_MICOH)

HSP 1 Score: 194 bits (494), Expect = 1.170e-58
Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            L EN   K NIKPQVD+Y L+NG+ +ILLAEGRLVNLGCAMGHPSFVMS SF+NQV+AQIELW H +KYP+GVH LPKKLDE VA +HLG L +KLTKL+ +Q++YLG+P DGP+KPDHYRY
Sbjct:  277 LNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPIGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPTDGPFKPDHYRY 398
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A1B6JAJ3_9HEMI (AdoHcyase_NAD domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JAJ3_9HEMI)

HSP 1 Score: 188 bits (478), Expect = 1.310e-58
Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            LE+N   K NIKPQVD++ L NG+++ILLAEGRLVNLGCAMGHPSFVMS SF+NQVLAQIELW   E+YP+GVHML KKLDEEVA  HL  L +KLTKL++EQ+EYLG+P DGP+KP+HYRY
Sbjct:   84 LEKNAVEKVNIKPQVDRFRLSNGRHVILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTKPEQYPLGVHMLRKKLDEEVAALHLDHLGVKLTKLTSEQAEYLGIPQDGPFKPEHYRY 205
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BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A7J6YKN8_9COLE (Adenosylhomocysteinase n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J6YKN8_9COLE)

HSP 1 Score: 195 bits (496), Expect = 1.340e-58
Identity = 92/122 (75.41%), Postives = 104/122 (85.25%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            LE+N K KTNIKPQVD+Y L NGK +ILLAEGRLVNLGCAMGHPSFVMS SF+NQVLAQIELW    +Y +GVHMLPKKLDEEVA  HL  L +KLTKL+ EQ+ YLG+P++GPYKPDHYRY
Sbjct:  311 LEKNAKSKTNIKPQVDRYELSNGKRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTKPGQYAIGVHMLPKKLDEEVAALHLDHLGVKLTKLTKEQASYLGIPVNGPYKPDHYRY 432
[Close]
BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Match: A0A8B7V528_CASCN (adenosylhomocysteinase isoform X2 n=4 Tax=Amniota TaxID=32524 RepID=A0A8B7V528_CASCN)

HSP 1 Score: 194 bits (492), Expect = 1.570e-58
Identity = 91/122 (74.59%), Postives = 104/122 (85.25%), Query Frame = 1 
Query:    1 LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSASFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLSTEQSEYLGLPIDGPYKPDHYRY 366
            L EN   K NIKPQVD+Y L+NG  +ILLAEGRLVNLGCAMGHPSFVMS SF+NQVLAQIELW H +KYPVGVH LPKKLDE VA +HLG L +KLTKL+ +Q++YLG+P DGP+KPDHYRY
Sbjct:  261 LNENAVEKVNIKPQVDRYRLKNGCRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPCDGPFKPDHYRY 382
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95019.31077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C767C831.560e-6380.33adenosylhomocysteinase-like n=1 Tax=Eurytemora aff... [more]
A0A553P6V7_TIGCA2.200e-6379.51Adenosylhomocysteinase n=1 Tax=Tigriopus californi... [more]
A0A834DP47_9CHIR4.400e-6074.59Adenosylhomocysteinase n=1 Tax=Phyllostomus discol... [more]
UPI00188667393.670e-5972.95adenosylhomocysteinase-like n=1 Tax=Falco rusticol... [more]
A0A1A6GGM8_NEOLE8.240e-5973.77Adenosylhomocysteinase n=1 Tax=Neotoma lepida TaxI... [more]
A0A852IZ87_9PICI9.110e-5973.77Adenosylhomocysteinase (Fragment) n=11 Tax=Sauria ... [more]
A0A8J6GDI5_MICOH1.170e-5872.95Adenosylhomocysteinase n=3 Tax=Eutheria TaxID=9347... [more]
A0A1B6JAJ3_9HEMI1.310e-5872.95AdoHcyase_NAD domain-containing protein (Fragment)... [more]
A0A7J6YKN8_9COLE1.340e-5875.41Adenosylhomocysteinase n=1 Tax=Abscondita terminal... [more]
A0A8B7V528_CASCN1.570e-5874.59adenosylhomocysteinase isoform X2 n=4 Tax=Amniota ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95019contigEcto-sp8_S_contig95019:224..592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMammalia
Stop1
Start0
Seed ortholog score199.9
Seed ortholog evalue6.9e-49
Seed eggNOG ortholog42254.XP_004612614.1
Preferred nameAHCY
Model size369
KEGG rclassRC00056,RC00069,RC01161,RC01243
KEGG koko:K01251
KEGG ReactionR00192,R04936
KEGG Pathwayko00270,ko01100,map00270,map01100
KEGG ModuleM00035
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657
Exons1
EggNOG free text desc.S-adenosylhomocysteine catabolic process
EggNOG OGs38CN8@33154,3BD4V@33208,3CREX@33213,3J5A4@40674,4839M@7711,4919J@7742,COG0499@1,KOG1370@2759
EC3.3.1.1
Cds size369
COG Functional cat.H
Best tax levelMammalia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145309.7049992-CDS-Ecto-sp8_S_contig95019:223..5921681145309.7049992-CDS-Ecto-sp8_S_contig95019:223..592Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig95019 224..592 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95019.31077.1prot_Ecto-sp8_S_contig95019.31077.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig95019 224..592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig95019.31077.1

>prot_Ecto-sp8_S_contig95019.31077.1 ID=prot_Ecto-sp8_S_contig95019.31077.1|Name=mRNA_Ecto-sp8_S_contig95019.31077.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=123bp
LEENCKLKTNIKPQVDKYTLQNGKNLILLAEGRLVNLGCAMGHPSFVMSA
SFSNQVLAQIELWCHTEKYPVGVHMLPKKLDEEVALSHLGALAIKLTKLS
TEQSEYLGLPIDGPYKPDHYRY*
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mRNA from alignment at Ecto-sp8_S_contig95019:224..592-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig95019.31077.1 ID=mRNA_Ecto-sp8_S_contig95019.31077.1|Name=mRNA_Ecto-sp8_S_contig95019.31077.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=369bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95019:224..592- (Ectocarpus species8 EcLAC_412)
CTCGAGGAGAACTGCAAGTTGAAGACCAACATCAAGCCCCAGGTGGACAA
ATACACTCTCCAGAACGGCAAGAACCTGATCCTCCTCGCTGAGGGACGCC
TGGTTAACCTTGGGTGTGCTATGGGTCACCCCAGCTTCGTTATGTCCGCA
TCCTTCTCCAACCAGGTCTTGGCTCAGATCGAGCTTTGGTGCCACACCGA
GAAGTACCCAGTTGGAGTCCACATGCTCCCCAAGAAGTTGGACGAGGAAG
TCGCTCTCTCCCACCTGGGCGCCCTGGCCATCAAGCTGACCAAGTTGTCC
ACCGAGCAGTCGGAGTACCTTGGTCTTCCTATCGATGGTCCATACAAGCC
CGACCACTACAGATACTAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig95019:224..592-

>mRNA_Ecto-sp8_S_contig95019.31077.1 ID=mRNA_Ecto-sp8_S_contig95019.31077.1|Name=mRNA_Ecto-sp8_S_contig95019.31077.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95019:224..592- (Ectocarpus species8 EcLAC_412)
CTCGAGGAGAACTGCAAGTTGAAGACCAACATCAAGCCCCAGGTGGACAA
ATACACTCTCCAGAACGGCAAGAACCTGATCCTCCTCGCTGAGGGACGCC
TGGTTAACCTTGGGTGTGCTATGGGTCACCCCAGCTTCGTTATGTCCGCA
TCCTTCTCCAACCAGGTCTTGGCTCAGATCGAGCTTTGGTGCCACACCGA
GAAGTACCCAGTTGGAGTCCACATGCTCCCCAAGAAGTTGGACGAGGAAG
TCGCTCTCTCCCACCTGGGCGCCCTGGCCATCAAGCTGACCAAGTTGTCC
ACCGAGCAGTCGGAGTACCTTGGTCTTCCTATCGATGGTCCATACAAGCC
CGACCACTACAGATACTAG
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