mRNA_Ecto-sp8_S_contig9501.31074.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: D8LFX7_ECTSI (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFX7_ECTSI) HSP 1 Score: 312 bits (799), Expect = 1.150e-105 Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENPARAKGRGANSIKMRRGVKNAGRRGSDXXXXXXXGDY 513
RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENPARAKGRGANSIKMRRGVK+AGRRGSDXXXXXXXGDY
Sbjct: 98 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENPARAKGRGANSIKMRRGVKSAGRRGSDXXXXXXXGDY 268
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: A0A835YNU3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU3_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.720e-58 Identity = 96/137 (70.07%), Postives = 116/137 (84.67%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKS--VCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENP 405
R+ E+KAKAA A+FG + EISK DWV EVT+AS + + VVAHLY+D +VECRVMEAALRS+A++F EVKFV+IRS QAVENWP+ANLPTLF+YR G LA+QLI ALGGK+M ADDLEWYLA QGIVETE++ +P
Sbjct: 102 RIVELKAKAARARFGSVIEISKGDWVAEVTEASANGDLWVVAHLYQDSVVECRVMEAALRSVAARFPEVKFVRIRSTQAVENWPDANLPTLFVYRGGALARQLITAAALGGKRMTADDLEWYLAQQGIVETELEGDP 238
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: A0A4D9CPR5_9STRA (Phosducin domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPR5_9STRA) HSP 1 Score: 160 bits (406), Expect = 7.060e-46 Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKS----------VCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENPARAKGR 423
R+ E K + A +FG + EI K DWVREVT+ SK+ + VV HLY+D + +CRV+E LR++A+KF+ VKF+KIRS A+ENWP+ NLPTLF+YRDGEL Q++ + +GGK+ +A DLEW+LA G+VETEM+E+P +GR
Sbjct: 114 RMKEWKERLATERFGSVEEIGKEDWVREVTEGSKAGGKGSGGEGGLWVVVHLYQDRVEDCRVLEEVLRAVAAKFKAVKFLKIRSTSAIENWPDRNLPTLFVYRDGELRTQMLGLKKVGGKKAQARDLEWWLAQAGVVETEMEEDPREEEGR 264
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: A0A2D4BYU9_PYTIN (Phosducin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYU9_PYTIN) HSP 1 Score: 140 bits (353), Expect = 7.670e-39 Identity = 66/126 (52.38%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGI 378
R+AEMKA+AA KFG++ I+K DW REVTDASK V+A+L++ + ECR+M+ LR +A + R+VKFV I++ +ENWP N PTLF+Y +GEL QL+ I LGG +MK +DLE +LA G+
Sbjct: 78 RIAEMKAQAARNKFGDVLPITKEDWTREVTDASKETWVIAYLWDSALQECRLMDEVLREVAKRHRDVKFVSIQALACIENWPSRNCPTLFMYHEGELKNQLLGIRKLGGLEMKVEDLEEHLAGAGV 203
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: A0A418B0T9_9STRA (Phosducin domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0T9_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.280e-36 Identity = 66/126 (52.38%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGI 378
R+AEMKA+ A FG++ ISK +W REVT+ASK+ VVA+L+E+ + C++M+ LR IAS+ R+VKFV I+SQ VENWP NLPTLF+Y+DG LA Q++ ++ L G + +D+E YLA QG+
Sbjct: 110 RIAEMKAQMARNVFGDVRPISKDEWTREVTEASKNCWVVAYLWENSVEACKLMDQILRVIASRHRDVKFVSIQSQVCVENWPARNLPTLFMYKDGNLATQMLTLNKLKGLNTRVEDVEEYLADQGV 235
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: A0A7S2W962_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W962_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.980e-36 Identity = 64/135 (47.41%), Postives = 96/135 (71.11%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENP 405
R+AEMKAK A +FG++ +I K+DW REV +ASK V+ HLY+D + C +M+ L+ +A +FR VK ++I++ AVEN+P+ NLP LFIY +G L QLI + +L G + + DLEWYLA +G++E++M+ P
Sbjct: 108 RLAEMKAKQATLRFGQVQDIQKSDWTREVNEASKEAWVLCHLYDDQLEACGLMDNLLKDVARRFRGVKCLRIKATSAVENFPDRNLPALFIYHEGTLQHQLITLASLHGLRARPQDLEWYLAERGVLESDMEGAP 242
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: W4GCF5_9STRA (Phosducin domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4GCF5_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.430e-36 Identity = 66/126 (52.38%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGI 378
R+AEMKA+ A FG++ ISK +W REVT+ASK VVA+L+E+ + C++M+ LR IA + R+VKFV I+SQ VENWP NLPTLFIY+DG LA Q++ + L G + +D+E YLA QG+
Sbjct: 76 RIAEMKAQMARNVFGDIQPISKDEWTREVTEASKGSWVVAYLWENSVEACKLMDQILRVIAGRHRDVKFVSIQSQVCVENWPLRNLPTLFIYKDGNLATQMLTLSKLKGLNTRVEDVEEYLAEQGV 201
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: A0A397VHA9_9GLOM (Thioredoxin-like protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397VHA9_9GLOM) HSP 1 Score: 131 bits (329), Expect = 2.600e-35 Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIV 381
R+AEMKA+A AKFGE+ +ISK D++REVTDASK V VV HL++D I EC++M A L ++A+K + KF+KI Q + N+P+ NLPTL IY +G++ QL+ + LGG M LE YL S G +
Sbjct: 71 RIAEMKAEALRAKFGEVMQISKPDFIREVTDASKEVWVVVHLFKDSIPECKLMNAHLATLAAKHKATKFIKIIGDQCIPNYPDKNLPTLLIYGEGDMKLQLVGLTELGGLNMSLKRLENYLISSGAI 197
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: K3WSH9_GLOUD (Phosducin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSH9_GLOUD) HSP 1 Score: 130 bits (328), Expect = 4.220e-35 Identity = 62/130 (47.69%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETE 390
R+AEMKA+ A KFGE+ ISK +W REVT+ S+ V+A+L++D + EC++M+ LR++A R+VKFV I++Q +ENWP+ N PTLF+Y G+L Q++ I LGG MK +DLE LA G+ + +
Sbjct: 76 RIAEMKAQMARNKFGEIQPISKDEWTREVTEGSQENWVIAYLWDDALEECKLMDNVLRAVAKNHRDVKFVSIQAQACIENWPQRNCPTLFMYHKGDLKNQVLGIRKLGGLDMKVEDLEERLAEAGVFKAD 205
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Match: UPI001EE56211 (phosducin-like protein 3 n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE56211) HSP 1 Score: 129 bits (323), Expect = 5.700e-34 Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 1 RVAEMKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEAALRSIASKFREVKFVKIRSQQAVENWPEANLPTLFIYRDGELAKQLIRIDALGGKQMKADDLEWYLASQGIVETEMDENP 405
R+AEMKA + +G++ EI+KADWV+EV A V VV H+Y+DGI C++M L ++A KF KFVK S + N+P+ NLPT+FIY + +L KQ + A GG +K D+LEW LA G V+T+M+E+P
Sbjct: 79 RIAEMKAAQMKSNYGDVLEITKADWVKEVNKAGDGVWVVVHVYQDGIPLCKLMNQHLSNLARKFPATKFVKGVSSVCIPNYPDKNLPTVFIYCNDDLKKQFVGPIAFGGMNLKQDELEWMLAQIGAVKTDMEESP 213 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9501.31074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9501.31074.1 >prot_Ecto-sp8_S_contig9501.31074.1 ID=prot_Ecto-sp8_S_contig9501.31074.1|Name=mRNA_Ecto-sp8_S_contig9501.31074.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=168bp MKAKAAAAKFGELFEISKADWVREVTDASKSVCVVAHLYEDGIVECRVMEback to top mRNA from alignment at Ecto-sp8_S_contig9501:3..2440+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9501.31074.1 ID=mRNA_Ecto-sp8_S_contig9501.31074.1|Name=mRNA_Ecto-sp8_S_contig9501.31074.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2438bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9501:3..2440+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9501:3..2440+ >mRNA_Ecto-sp8_S_contig9501.31074.1 ID=mRNA_Ecto-sp8_S_contig9501.31074.1|Name=mRNA_Ecto-sp8_S_contig9501.31074.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=504bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9501:3..2440+ (Ectocarpus species8 EcLAC_412)back to top |