mRNA_Ecto-sp8_S_contig95.31068.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI) HSP 1 Score: 355 bits (910), Expect = 8.520e-120 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 1
Query: 1 MALDNSIVSESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDKTS 522
MALDNSIVSESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDKT+
Sbjct: 1 MALDNSIVSESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDKTN 174
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA) HSP 1 Score: 186 bits (473), Expect = 5.380e-56 Identity = 81/117 (69.23%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 46 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
+RRVW++EED AIR LV +HGTRSW+ I E + D++I GR+GKQCRERWHNHLDP+I KG WTPEEE ++ + E+GN+WSEIAKRLPGRTDN VKN WYS MRRNVR L+REVS
Sbjct: 52 DRRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVRRLNREVS 168
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN) HSP 1 Score: 174 bits (440), Expect = 8.590e-53 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 40 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
S +RRVWS++ED AI+ LV R+GTRSW+ I EH+ +DY+I GR+GKQCRERWHNHLDP I K WT +EE ++ +GN+WSEIAK LPGRTDN VKN WYS MRRNVR L+REV+
Sbjct: 3 SGDRRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVN 121
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN) HSP 1 Score: 165 bits (417), Expect = 2.410e-48 Identity = 75/118 (63.56%), Postives = 92/118 (77.97%), Query Frame = 1
Query: 46 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIG-NRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
+RRVW+ +ED+AIR LV ++GTRSW+ I EH+ D++I GR+GKQCRERWHNHLDP I K WT EEE ++ +G N+WSEIAK LPGRTDN VKN WYS MRRNVR L+REV+
Sbjct: 6 DRRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVN 123
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.390e-47 Identity = 83/138 (60.14%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 22 VSESRRSEN----RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREV-SGPPQRSSL 420
+SES + +N RR WS+ EDDAIR LVK HGT+ W+TI L +DY I R+GKQCRERWHNHLDP+I+K WT EEEA++ K +GNRWSEI+K LPGRTDN +KN WYS MRRNVR L++EV G P + L
Sbjct: 1 MSESAQKKNGSGDRRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHWYSMMRRNVRRLNKEVLDGMPMSAPL 138
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A7S2SND5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.350e-43 Identity = 71/116 (61.21%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 46 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREV 393
+RRVWS EED+AIR LV GT+ W+ I L Y+I GR+GKQCRERWHNHLDP IKK W+ EE + + ++GNRWSEI+K LPGRTDN +KN WYS+MRRNVR L++EV
Sbjct: 42 DRRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHLDPEIKKCPWSESEEQALAEAHQKLGNRWSEISKLLPGRTDNAIKNHWYSTMRRNVRRLTKEV 157
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A7S2ST59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.040e-42 Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 49 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
RR WSR+EDDAI LV RHGT+ WA I + L + S V RSGKQCR RW NHLDP+IKK W+ EE +I + +GN+W+EIAK LPGRTDN +KN WYS+MRRN+R L++E+S
Sbjct: 39 RRAWSRKEDDAIVRLVNRHGTKRWAVIAQELNGEISGVFRSGKQCRTRWLNHLDPAIKKEPWSEHEERIIYDAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEIS 154
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A835ZL73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL73_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.790e-42 Identity = 71/117 (60.68%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 49 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSG 399
RR WS +ED AIR LV + G ++W+ + + +Y+I GR+ KQ ERWHNHL P I K WTP+EE ++ + AE+GNRWSEIAKRLPGRTDN VKN WYSSMRRNVR L+REV G
Sbjct: 38 RRSWSTKEDAAIRSLVDKLGMQAWSQVAAAMETEYAIFGRTSKQIWERWHNHLSPGISKAPWTPQEERVMAQAHAELGNRWSEIAKRLPGRTDNHVKNHWYSSMRRNVRRLTREVGG 154
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A7S2G8M0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.850e-41 Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 49 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 396
RR W+R+EDDAI LVKRHGT+ WA I + L + V RSGKQCR RW NHLDP+IKK W+ EE +I + +GN+W+EIAK LPGRTDN +KN WYS+MRRN+R L++E++
Sbjct: 50 RRAWTRKEDDAIVRLVKRHGTKRWACIAQELNTEIPGVFRSGKQCRTRWLNHLDPAIKKEPWSDTEEHIIYDAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEIA 165
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Match: A0A7S4JA45_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JA45_9EUKA) HSP 1 Score: 144 bits (362), Expect = 2.150e-40 Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 40 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSR 387
S RRVWS +ED I LV+ HGTRSW+TI L + R+GKQCRERWHNHLDP I KG WT EE+ + + +GNRW+EIAK LPGRTDNQ+KN W S++RR +R L+R
Sbjct: 61 SSERRVWSADEDTKIAALVEEHGTRSWSTIAAQLPS------RTGKQCRERWHNHLDPIINKGEWTVEEDRKLLEAHHALGNRWAEIAKMLPGRTDNQIKNRWNSALRRELRKLNR 170 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95.31068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig95.31068.1 >prot_Ecto-sp8_S_contig95.31068.1 ID=prot_Ecto-sp8_S_contig95.31068.1|Name=mRNA_Ecto-sp8_S_contig95.31068.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=184bp MALDNSIVSESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADback to top mRNA from alignment at Ecto-sp8_S_contig95:2426..4995- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig95.31068.1 ID=mRNA_Ecto-sp8_S_contig95.31068.1|Name=mRNA_Ecto-sp8_S_contig95.31068.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2570bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95:2426..4995- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig95:2426..4995- >mRNA_Ecto-sp8_S_contig95.31068.1 ID=mRNA_Ecto-sp8_S_contig95.31068.1|Name=mRNA_Ecto-sp8_S_contig95.31068.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=552bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95:2426..4995- (Ectocarpus species8 EcLAC_412)back to top |