mRNA_Ecto-sp8_S_contig94930.31057.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A6H5L2V5_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2V5_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 1.940e-22 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAVSLEVRPSELVS ADSVSVCLSKGLGAPVGSVLVGSEQFIYE R
Sbjct: 323 GARLWNAAVSLEVRPSELVSDADSVSVCLSKGLGAPVGSVLVGSEQFIYEAR 374
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: UPI00166F93C3 (aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Streptomyces fuscichromogenes TaxID=1324013 RepID=UPI00166F93C3) HSP 1 Score: 79.3 bits (194), Expect = 3.230e-16 Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAV+L VRP+EL +GAD+V VCLSKGLGAPVGSVL G +F+ E R
Sbjct: 180 GARLWNAAVALGVRPAELAAGADTVQVCLSKGLGAPVGSVLAGDAEFVREAR 231
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A1G1C2C8_9BACT (Threonine aldolase n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1C2C8_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 1.680e-15 Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARL+NA+V+L+VRPSELV+ ADSVSVCLSKGLGAPVG+V+ GS+ FI E R
Sbjct: 173 GARLFNASVALDVRPSELVADADSVSVCLSKGLGAPVGAVVCGSKAFITEAR 224
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A812X8Y3_9DINO (THA2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X8Y3_9DINO) HSP 1 Score: 77.4 bits (189), Expect = 1.780e-15 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAV+L + P+ELV ADSV+VCLSKGLGAPVGSVLVG+ +FI++ R
Sbjct: 189 GARLWNAAVALGLPPAELVKPADSVNVCLSKGLGAPVGSVLVGTAEFIHKAR 240
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A3A0AG25_9CHLR (Low-specificity L-threonine aldolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AG25_9CHLR) HSP 1 Score: 77.4 bits (189), Expect = 1.860e-15 Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAV+L+V P+ LV ADSVSVCLSKGLGAPVGSV+ GS +FI R
Sbjct: 177 GARLWNAAVALDVAPARLVQSADSVSVCLSKGLGAPVGSVVAGSAEFIQRAR 228
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A1H9AKJ4_9PSEU (L-threonine aldolase n=5 Tax=Lentzea TaxID=165301 RepID=A0A1H9AKJ4_9PSEU) HSP 1 Score: 77.0 bits (188), Expect = 2.150e-15 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNA+V+L V PSEL +GAD+V VCLSKGLGAPVGSV+ GS F+ E R
Sbjct: 172 GARLWNASVALGVPPSELTTGADTVQVCLSKGLGAPVGSVVAGSSSFVVEAR 223
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A429RAR5_9ACTN (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=2 Tax=Streptomyces TaxID=1883 RepID=A0A429RAR5_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 2.270e-15 Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAV+L+V P++L GAD++ VCLSKGLGAPVGSVL GS F+ E R
Sbjct: 180 GARLWNAAVALDVPPADLAEGADTIQVCLSKGLGAPVGSVLAGSTDFVREAR 231
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A1Q9E1W6_SYMMI (Putative low-specificity L-threonine aldolase 2 n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E1W6_SYMMI) HSP 1 Score: 77.4 bits (189), Expect = 2.560e-15 Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAV+L + P+ELV ADSV+VCLSKGLGAPVGSVLVG+ +FI++ R
Sbjct: 685 GARLWNAAVALGLPPAELVKPADSVNVCLSKGLGAPVGSVLVGTAEFIHKAR 736
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: UPI001BADD23F (aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Kutzneria sp. CA-103260 TaxID=2802641 RepID=UPI001BADD23F) HSP 1 Score: 76.6 bits (187), Expect = 3.210e-15 Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAA++L V P+EL G DSV VCLSKGLGAPVGSV+ G+E+F+ E R
Sbjct: 183 GARLWNAAIALGVAPAELAVGVDSVQVCLSKGLGAPVGSVVAGTEEFVAEAR 234
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Match: A0A3S9PDI1_STRLT (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Streptomyces luteoverticillatus TaxID=66425 RepID=A0A3S9PDI1_STRLT) HSP 1 Score: 76.3 bits (186), Expect = 4.570e-15 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEVR 156
GARLWNAAV+L V P++L GADSV VCLSKGLGAPVGSVL G +F+ E R
Sbjct: 180 GARLWNAAVALGVPPADLAEGADSVQVCLSKGLGAPVGSVLAGGTEFVREAR 231 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94930.31057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig94930.31057.1 >prot_Ecto-sp8_S_contig94930.31057.1 ID=prot_Ecto-sp8_S_contig94930.31057.1|Name=mRNA_Ecto-sp8_S_contig94930.31057.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=52bp GARLWNAAVSLEVRPSELVSGADSVSVCLSKGLGAPVGSVLVGSEQFIYEback to top mRNA from alignment at Ecto-sp8_S_contig94930:424..579- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig94930.31057.1 ID=mRNA_Ecto-sp8_S_contig94930.31057.1|Name=mRNA_Ecto-sp8_S_contig94930.31057.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=156bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94930:424..579- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig94930:424..579- >mRNA_Ecto-sp8_S_contig94930.31057.1 ID=mRNA_Ecto-sp8_S_contig94930.31057.1|Name=mRNA_Ecto-sp8_S_contig94930.31057.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=156bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94930:424..579- (Ectocarpus species8 EcLAC_412)back to top |