mRNA_Ecto-sp8_S_contig94851.31042.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig94851.31042.1
Unique NamemRNA_Ecto-sp8_S_contig94851.31042.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A6H5JG62_9PHAE (IPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG62_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.610e-24
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQK+
Sbjct:  852 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKI 903
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: D7FKN8_ECTSI (IPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN8_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.610e-24
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQK+
Sbjct:  345 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKI 396
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A7S3LBL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBL8_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.340e-14
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            A+V  G+MG+MGNKGGV +R++  DS+LCFV SHLAAHREN+  RN ++  V
Sbjct:    6 ASVGVGVMGMMGNKGGVSVRVQFYDSTLCFVCSHLAAHRENVTGRNADFANV 57
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A5D6XQQ9_9STRA (Rho-GAP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.080e-13
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            AT   G+MGVMGNKGGV +RL L DS+LCFV +HLAAHREN+  RN +Y  +
Sbjct:  178 ATAGVGIMGVMGNKGGVAVRLNLYDSTLCFVCAHLAAHRENVAGRNADYLSI 229
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A7M3S7J1_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Phytopythium sindhum TaxID=795340 RepID=A0A7M3S7J1_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.260e-13
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            AT   G+MG+MGNKGG  +RL   DS+LCFV SHLAAHREN+  RN +YQ +
Sbjct:   96 ATAGVGIMGMMGNKGGAAVRLSFYDSTLCFVCSHLAAHRENVAGRNADYQNI 147
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A7I6MYA6_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Pustula obtusata TaxID=1471603 RepID=A0A7I6MYA6_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.280e-13
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            AT   G+MG+MGNKGG  IRL+  +S+LCFVSSHLAAHR+N+ ARN +Y  +
Sbjct:   51 ATAGVGIMGMMGNKGGAAIRLKFYNSTLCFVSSHLAAHRDNVAARNADYYNI 102
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A7I6N0L9_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Saprolegnia monilifera TaxID=120419 RepID=A0A7I6N0L9_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.660e-13
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            +T   G+MGVMGNKGGV +RLRL DS+LCFV SHLAAH  N+  RN ++  +
Sbjct:    2 STAGVGIMGVMGNKGGVAVRLRLYDSTLCFVCSHLAAHTHNVSGRNADFANI 53
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: UPI0007121FBB (inositol 5-phosphatase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007121FBB)

HSP 1 Score: 72.0 bits (175), Expect = 2.020e-13
Identity = 29/52 (55.77%), Postives = 43/52 (82.69%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            ++V+ G++G+MGNKGG GIR+R+ DS++CFV  H+AAHREN+  RN +Y K+
Sbjct:  137 SSVATGLLGMMGNKGGAGIRMRINDSTMCFVCVHMAAHRENVAERNADYHKI 188
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BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A7S2YR08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YR08_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.510e-13
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:    1 ATVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            A+V  G+MG+MGNKGGV +RL+  DS+LCFV +HLAAHREN+  RN ++  V
Sbjct:   92 ASVGVGVMGMMGNKGGVSVRLQFYDSTLCFVCTHLAAHRENVTGRNADFANV 143
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Match: A0A7S2SHQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHQ8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.760e-13
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 1 
Query:    4 TVSAGMMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV 156
            TV  G+MG+MGNKGG  IR+RLRD++LCFV++HLAAHR+N+  RN ++  +
Sbjct:  154 TVGVGVMGMMGNKGGASIRMRLRDTTLCFVAAHLAAHRDNVAGRNADFANI 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94851.31042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG62_9PHAE1.610e-2498.08IPPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FKN8_ECTSI1.610e-2498.08IPPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3LBL8_9STRA4.340e-1459.62Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A5D6XQQ9_9STRA1.080e-1363.46Rho-GAP domain-containing protein n=1 Tax=Pythium ... [more]
A0A7M3S7J1_9STRA1.260e-1361.54Putative inositol polyphosphate 5-phosphatase (Fra... [more]
A0A7I6MYA6_9STRA1.280e-1361.54Putative inositol polyphosphate 5-phosphatase (Fra... [more]
A0A7I6N0L9_9STRA1.660e-1359.62Putative inositol polyphosphate 5-phosphatase (Fra... [more]
UPI0007121FBB2.020e-1355.77inositol 5-phosphatase n=1 Tax=Blastocystis sp. su... [more]
A0A7S2YR08_9STRA2.510e-1359.62Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2SHQ8_9STRA2.760e-1358.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94851contigEcto-sp8_S_contig94851:436..591 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score95.5
Seed ortholog evalue6.8e-18
Seed eggNOG ortholog2880.D7FKN8
Model size156
KEGG rclassRC00078
KEGG koko:K01099,ko:K01974,ko:K12819,ko:K20279
KEGG ReactionR04404,R09827
KEGG Pathwayko00562,ko01100,ko03040,ko04070,map00562,map01100,map03040,map04070
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
EggNOG free text desc.phosphatidylinositol dephosphorylation
EggNOG OGsCOG5411@1,KOG0565@2759,KOG0566@2759
EC3.1.3.36,6.5.1.4
Cds size138
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145307.038301-CDS-Ecto-sp8_S_contig94851:435..5731681145307.038301-CDS-Ecto-sp8_S_contig94851:435..573Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig94851 436..573 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145307.0521607-UTR-Ecto-sp8_S_contig94851:573..5911681145307.0521607-UTR-Ecto-sp8_S_contig94851:573..591Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig94851 574..591 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94851.31042.1prot_Ecto-sp8_S_contig94851.31042.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig94851 436..573 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig94851.31042.1

>prot_Ecto-sp8_S_contig94851.31042.1 ID=prot_Ecto-sp8_S_contig94851.31042.1|Name=mRNA_Ecto-sp8_S_contig94851.31042.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=46bp
MMGVMGNKGGVGIRLRLRDSSLCFVSSHLAAHRENIKARNENYQKV
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mRNA from alignment at Ecto-sp8_S_contig94851:436..591-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig94851.31042.1 ID=mRNA_Ecto-sp8_S_contig94851.31042.1|Name=mRNA_Ecto-sp8_S_contig94851.31042.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=156bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94851:436..591- (Ectocarpus species8 EcLAC_412)
GCGACCGTTTCCGCGGGCATGATGGGCGTGATGGGCAACAAGGGTGGCGT
CGGAATCCGCCTGCGCCTCCGTGACAGCTCTCTGTGCTTTGTTTCGAGCC
ACTTGGCTGCTCATCGGGAAAACATCAAGGCCAGAAATGAAAATTACCAG
AAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig94851:436..591-

>mRNA_Ecto-sp8_S_contig94851.31042.1 ID=mRNA_Ecto-sp8_S_contig94851.31042.1|Name=mRNA_Ecto-sp8_S_contig94851.31042.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=138bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94851:436..591- (Ectocarpus species8 EcLAC_412)
ATGATGGGCGTGATGGGCAACAAGGGTGGCGTCGGAATCCGCCTGCGCCT
CCGTGACAGCTCTCTGTGCTTTGTTTCGAGCCACTTGGCTGCTCATCGGG
AAAACATCAAGGCCAGAAATGAAAATTACCAGAAGGTA
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