mRNA_Ecto-sp8_S_contig9466.31007.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI) HSP 1 Score: 519 bits (1336), Expect = 7.400e-169 Identity = 406/455 (89.23%), Postives = 409/455 (89.89%), Query Frame = 3
Query: 792 VCLQGQKKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEEGEGDAEGGDVEMSAREEDGQTAAAGGSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEGLVESKQSAPADRVRFYLKVLESAAGAREAAAARLRAQIRETAERYPSVFSPSSDDAAXXXXXXXXXXXXXXXTDAGSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXDRADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSSSSDDKGARGQDKGNGGNVFGMVGKFLLGVVHKPPGEEEEEGDQDQACRQKETHGEGAAGSGS---AAPVAWTPTVDAPSTPNAISKGADPSGLFGLMGMPSIRSGTERSRKEIDARPVPPDFLIFSIFSCGLDNELGGKVLCVCKP 2147
VCLQGQKKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEEG DAEGGDVEMSAREEDG+ AAAGGSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEGLVESKQSAPADRVRFYL+VLESAA AREAAAARLRAQIRETAERYPSVFSPSSDDAAXXXXXXXXXXXXXX TDAGS XXXXXXXXXXXXXXXXXXXXXXXXXXXDRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGSSSSDDKGARGQDKGNGGNVFGMVGKFLLGVVHKPPGEE AA VA T TVDAPSTPNA+ GADPS LFGLMG PSIRSGTER RKEIDARPVPPDFLIFSIFSCGLDNELGGKVL VCKP
Sbjct: 383 VCLQGQKKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEEG--DAEGGDVEMSAREEDGKMAAAGGSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEGLVESKQSAPADRVRFYLEVLESAAAAREAAAARLRAQIRETAERYPSVFSPSSDDAAXXXXXXXXXXXXXXGTDAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGSSSSDDKGARGQDKGNGGNVFGMVGKFLLGVVHKPPGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVASTSTVDAPSTPNAV--GADPSRLFGLMGTPSIRSGTERFRKEIDARPVPPDFLIFSIFSCGLDNELGGKVLSVCKP 833
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE) HSP 1 Score: 487 bits (1254), Expect = 3.890e-157 Identity = 363/496 (73.19%), Postives = 368/496 (74.19%), Query Frame = 3
Query: 588 DKATGASPSGRAKNRRPTNPSATVTEAALASVAKSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG-----------------------VCLQGQKKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEE----------GEGDAEGGDVEMSAREEDGQTAAAGGSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEGLVESKQSAPADRVRFYLKVLESAAGAREAAAARLRAQIRETAERYPSVFSPSSDDAAXXXXXXXXXXXXXXXTDAGSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXDRADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GGSSSSDDKGARGQDKGNGGNVFGMVGKFLLGVVHKPPGEEEEEGDQDQACRQKETHGEGAAGSGSAAPVAWTPTVDAPSTPNAISKGA 1973
D ATGASPSGR KNRRPTNPSATVTEAALASVAKSPA XXXXXXXXXXXXXXXXXXXXXXX AG VCLQGQKKRAAVVRYVGETQFATGVWVGVELSP ADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEE GE DAEG DVE SAREEDG TAA GSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEG+VES QSAPADR+R YL+VLESAAGAREAAAARLRAQIRETAERYPSVFSPS DDAAXXXXX TDA SG XXXXXXXXXXXXX XXXXXXX RAD XXXX XXXX GGSS SDDKGARGQDKGNGGNVFGMVGKFLLGVVHKPPGEEE GDQDQAC+QK+THGEGAAGSGSAAPVA TPTVDAPSTPNAI KGA
Sbjct: 280 DMATGASPSGRPKNRRPTNPSATVTEAALASVAKSPASGXXXXXXXXXXXXXXXXXXXXXXXRAPPAGEGGSVAGSGEGVTAVTSLVEGSKVCLQGQKKRAAVVRYVGETQFATGVWVGVELSPGADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEXXXXXXXXXXXGERDAEGDDVETSAREEDGLTAATDGSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEGMVESMQSAPADRIRLYLEVLESAAGAREAAAARLRAQIRETAERYPSVFSPSPDDAAXXXXXKGGRGSSSGGTDASSG----PGXXXXXXXXXXXXXDGXXXXXXXXRADGGEDDNANDXXXXAASGKTEEDESVEDTETVAVEADDGDAADTXXXXAVGEEDEGGPADGGSSRSDDKGARGQDKGNGGNVFGMVGKFLLGVVHKPPGEEE--GDQDQACQQKKTHGEGAAGSGSAAPVASTPTVDAPSTPNAIGKGA 769
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: C3YMN8_BRAFL (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YMN8_BRAFL) HSP 1 Score: 70.1 bits (170), Expect = 2.110e-11 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 3
Query: 810 KKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPD 983
+ + VV++VGET+FA+G WVG+EL D G NDG V+GV YFKC P G+F +PD
Sbjct: 8 RDKHGVVKFVGETEFASGPWVGIELDLDT---GKNDGEVKGVRYFKCRPNYGIFVRPD 62
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A7S1WB37_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1WB37_NEODS) HSP 1 Score: 71.2 bits (173), Expect = 3.090e-11 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 3
Query: 804 GQKKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELL 998
G + R+ ++G T+FA G+WVGVEL DA PG NDG+V+GV YF+C P GVF +P++ E L
Sbjct: 24 GDEIRSGTCLFLGATEFADGIWVGVEL--DAQWPGKNDGAVQGVKYFECSPGQGVFVRPELVETL 86
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A5C3NSK7_9APHY (CAP-Gly domain-containing protein n=1 Tax=Polyporus arcularius HHB13444 TaxID=1314778 RepID=A0A5C3NSK7_9APHY) HSP 1 Score: 73.6 bits (179), Expect = 7.720e-11 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 3
Query: 813 KRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPD 983
++ VRYVG T+FA GVWVG+E +P G NDGSV+G YF+C P CGVF KPD
Sbjct: 161 RKRGTVRYVGPTEFAKGVWVGIEYD---EPIGKNDGSVKGKRYFECKPNCGVFVKPD 214
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A371DNI4_9APHY (CAP-Gly domain-containing protein n=3 Tax=Polyporaceae TaxID=5317 RepID=A0A371DNI4_9APHY) HSP 1 Score: 73.6 bits (179), Expect = 8.270e-11 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 3
Query: 813 KRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPD 983
++ VRYVG T+FA GVWVG+E +P G NDGSV+G YF+C P CGVF KPD
Sbjct: 165 RKRGTVRYVGPTEFAKGVWVGIEYD---EPIGKNDGSVKGKRYFECKPNCGVFVKPD 218
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A7S3YAS2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAS2_HETAK) HSP 1 Score: 72.0 bits (175), Expect = 8.750e-11 Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 3
Query: 825 VVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEEGEGDAEGGDVEMSAREEDGQTAAAGGSDEATRAGGELLRFHKLFANEALEALKEEMAMIPDLEGLVESKQSAPADRVRFYLKVLES 1268
V+R+ GET+FA+G+WVGVEL + G NDGSV+G YF C G+F +P+ L+++ G AE A+ G AG ++++ + E AL EE+ ++ + EGL +A +V YLK LE+
Sbjct: 25 VLRFYGETEFASGIWVGVELDTEN---GKNDGSVKGTRYFNCRRNHGLFVRPNQVALVDQGTSNGAAE---------------ASPG----VNGAGRSMIQWQRDHIREMFSALDEEIRVLEEFEGL---GSAATQQQVGAYLKSLEA 147
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A1Y2B0I4_9FUNG (CAP-Gly domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2B0I4_9FUNG) HSP 1 Score: 70.5 bits (171), Expect = 1.320e-10 Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 3
Query: 828 VRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEEG 1013
VRY+GET+F TG+WVGVEL D G N+G+V GV+YFKCPPL G+F E L ++G
Sbjct: 69 VRYIGETKFKTGIWVGVEL--DKRGVGKNNGTVMGVTYFKCPPLTGIFIPVTAVEKLSGDQG 128
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A1Y3BKZ2_EURMA (CAP-Gly domain-containing protein n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BKZ2_EURMA) HSP 1 Score: 69.3 bits (168), Expect = 1.810e-10 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3
Query: 816 RAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFEL 995
+ + Y+GET+FATG+W G+ L P G NDGSV GVSYF+C P G+F KP+ L
Sbjct: 42 KLGTIGYIGETEFATGIWAGIILD---SPTGKNDGSVNGVSYFQCRPKFGIFVKPEKLRL 98
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Match: A0A2H1CSX2_FASHE (CAP-Gly domain protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CSX2_FASHE) HSP 1 Score: 70.1 bits (170), Expect = 5.010e-10 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 3
Query: 816 RAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAK 977
R V ++GETQFATG W+GV LS P G NDGSV GVSYFKC P+ G+F+K
Sbjct: 30 RIGTVAFIGETQFATGEWIGVILS---SPNGKNDGSVSGVSYFKCKPMHGIFSK 80 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9466.31007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9466.31007.1 >prot_Ecto-sp8_S_contig9466.31007.1 ID=prot_Ecto-sp8_S_contig9466.31007.1|Name=mRNA_Ecto-sp8_S_contig9466.31007.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=389bp MFELLEEEEGEGDAEGGDVEMSAREEDGQTAAAGGSDEATRAGGELLRFHback to top mRNA from alignment at Ecto-sp8_S_contig9466:79..6218+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9466.31007.1 ID=mRNA_Ecto-sp8_S_contig9466.31007.1|Name=mRNA_Ecto-sp8_S_contig9466.31007.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6140bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9466:79..6218+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9466:79..6218+ >mRNA_Ecto-sp8_S_contig9466.31007.1 ID=mRNA_Ecto-sp8_S_contig9466.31007.1|Name=mRNA_Ecto-sp8_S_contig9466.31007.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1167bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9466:79..6218+ (Ectocarpus species8 EcLAC_412)back to top |