mRNA_Ecto-sp8_S_contig94286.30943.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig94286.30943.1
Unique NamemRNA_Ecto-sp8_S_contig94286.30943.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A6H5K515_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K515_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.560e-33
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 183
            GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR
Sbjct: 1170 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 1230
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: D8LIN7_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN7_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.560e-33
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 183
            GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR
Sbjct: 1178 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 1238
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A6H5JBM1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.480e-22
Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 183
            GRVIH+DFGFMLANSPGGN  FESAPFKLT  F++LMGG  S CF+ FR +CV TF+ LRR
Sbjct: 1095 GRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSACFKGFREVCVQTFMELRR 1155
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A397FFR5_9STRA (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FFR5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.890e-20
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLAL 177
            G +IH+DFGF+  NSPGGN+GFESAPFKLT  F+ LM G +S+ FREFR LCV  + AL
Sbjct:   60 GHIIHIDFGFLFTNSPGGNIGFESAPFKLTDEFVELMDGPRSKLFREFRSLCVKAYWAL 118
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A397AX81_9STRA (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AX81_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.940e-19
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLAL 177
            G +IH+DFGF+  NSPGGN+GFESAPFKLT  F+ LM G +S+ FREFR LCV  + AL
Sbjct:  210 GHIIHIDFGFLFTNSPGGNIGFESAPFKLTDEFVELMDGPRSKLFREFRSLCVKAYWAL 268
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A7S1BQL9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQL9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.280e-19
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 183
            G +IH+DFGF+L NSPGG LGFE APFKLT+ F+ +M G  SR FR FR LCV TF+ LR+
Sbjct:  625 GHIIHIDFGFLLLNSPGGGLGFERAPFKLTRDFVEMMDGPHSRSFRRFRDLCVRTFMELRK 685
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A3R7WN56_9STRA (PI3K/PI4K catalytic domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WN56_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.400e-19
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLAL 177
            G +IH+DFGF+  NSPGGN+GFESAPFKLT  F+ LM G +S+ FREFR LCV  + AL
Sbjct:  429 GHIIHIDFGFLFTNSPGGNIGFESAPFKLTDEFVELMDGPRSKLFREFRSLCVKAYWAL 487
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: W4G898_9STRA (PI3K/PI4K catalytic domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G898_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.490e-19
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLAL 177
            G +IH+DFGF+  NSPGGN+GFESAPFKLT  F+ LM G +S+ FREFR LCV  + AL
Sbjct:  656 GHIIHIDFGFLFTNSPGGNIGFESAPFKLTDEFVELMDGPRSKLFREFRSLCVKAYWAL 714
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A7S4IA62_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IA62_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.860e-19
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 183
            G +IH+DFGF   +SPGGN GFESAPFKLT+ F++LMGG +SR F  FR LC  TFL LRR
Sbjct:  304 GHLIHIDFGFFFLSSPGGNSGFESAPFKLTRDFVDLMGGPESRTFARFRDLCYRTFLELRR 364
[Close]
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Match: A0A7S4DAE3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE3_HETAK)

HSP 1 Score: 87.0 bits (214), Expect = 4.910e-19
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:    1 GRVIHVDFGFMLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALRR 183
            G  IH+DFGFMLA +PG N  FE APFKLT+ ++ L+GG  S CFR FRGLCVD F+ALRR
Sbjct:  176 GHAIHIDFGFMLARTPG-NANFERAPFKLTEEWVELLGGKGSACFRRFRGLCVDVFMALRR 235
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94286.30943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K515_9PHAE1.560e-33100.00PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
D8LIN7_ECTSI1.560e-33100.00PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A6H5JBM1_9PHAE3.480e-2272.13PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A397FFR5_9STRA1.890e-2064.41PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A397AX81_9STRA1.940e-1964.41PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A7S1BQL9_9STRA3.280e-1963.93Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A3R7WN56_9STRA4.400e-1964.41PI3K/PI4K catalytic domain-containing protein n=6 ... [more]
W4G898_9STRA4.490e-1964.41PI3K/PI4K catalytic domain-containing protein n=5 ... [more]
A0A7S4IA62_9STRA4.860e-1965.57Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4DAE3_HETAK4.910e-1965.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94286contigEcto-sp8_S_contig94286:1..183 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score108.2
Seed ortholog evalue1.1e-21
Seed eggNOG ortholog2880.D8LIN7
Preferred namePI4KB
Model size183
KEGG rclassRC00002,RC00078
KEGG koko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00130
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036213,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
Exons1
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
EC2.7.1.67
Cds size153
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145300.3055604-UTR-Ecto-sp8_S_contig94286:0..301681145300.3055604-UTR-Ecto-sp8_S_contig94286:0..30Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig94286 1..30 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145300.3199246-CDS-Ecto-sp8_S_contig94286:30..1831681145300.3199246-CDS-Ecto-sp8_S_contig94286:30..183Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig94286 31..183 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94286.30943.1prot_Ecto-sp8_S_contig94286.30943.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig94286 31..183 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig94286.30943.1

>prot_Ecto-sp8_S_contig94286.30943.1 ID=prot_Ecto-sp8_S_contig94286.30943.1|Name=mRNA_Ecto-sp8_S_contig94286.30943.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=51bp
MLANSPGGNLGFESAPFKLTQGFLNLMGGTQSRCFREFRGLCVDTFLALR
R
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mRNA from alignment at Ecto-sp8_S_contig94286:1..183+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig94286.30943.1 ID=mRNA_Ecto-sp8_S_contig94286.30943.1|Name=mRNA_Ecto-sp8_S_contig94286.30943.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=183bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94286:1..183+ (Ectocarpus species8 EcLAC_412)
GGACGCGTGATCCACGTCGACTTCGGCTTCATGCTCGCCAACAGCCCGGG
GGGAAACCTTGGGTTCGAGTCCGCCCCCTTCAAGCTGACGCAGGGGTTCC
TGAACCTGATGGGGGGCACGCAGTCTAGATGTTTCCGAGAGTTCCGGGGG
CTGTGCGTGGACACGTTTCTCGCCCTTCGGCGC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig94286:1..183+

>mRNA_Ecto-sp8_S_contig94286.30943.1 ID=mRNA_Ecto-sp8_S_contig94286.30943.1|Name=mRNA_Ecto-sp8_S_contig94286.30943.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=153bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94286:1..183+ (Ectocarpus species8 EcLAC_412)
ATGCTCGCCAACAGCCCGGGGGGAAACCTTGGGTTCGAGTCCGCCCCCTT
CAAGCTGACGCAGGGGTTCCTGAACCTGATGGGGGGCACGCAGTCTAGAT
GTTTCCGAGAGTTCCGGGGGCTGTGCGTGGACACGTTTCTCGCCCTTCGG
CGC
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