mRNA_Ecto-sp8_S_contig941.30923.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 1017 bits (2630), Expect = 0.000e+0 Identity = 612/702 (87.18%), Postives = 621/702 (88.46%), Query Frame = 3
Query: 60 MSVPRKVLLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGSGSSRVVRRRHRPRQYTVVGEGGAVAAGDSLSMAVGERKAALGRSSISSRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAAAADAGPVNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGR--------GEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2141
M VPRK+LLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRG+GSSRVVR RHRPRQYTVV EGGA AAGDSLSM VGER+AALGRSSISSRQR XXXXXXXXXXXXXXXXXXXXXXXXXX TPNGAAAAD GPVNGGTFRELFRGRLPDWLL RLEQLGFATPTLVQRQALEVILGE +HDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADE +GEDEEEA RLAEVGAG+VTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSH+YVVCPPEQKLAVLRALVKRELGVSASEAAA XXXX PS+GQAGGGGV NT +QADTRGLVFALATKPLEGIAASLDKALGGRGS XXXXXXXXXXXXXXXXX G QPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct: 1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTGSSRVVRCRHRPRQYTVVEEGGAEAAGDSLSMVVGERRAALGRSSISSRQRRRSARVCHDATXXXXXXXXXXXXXXXXXXXXXXXXXXASQDSPAPLLDGGNVFSS--TPNGAAAADPGPVNGGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEGDS-PSEGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 699
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 796 bits (2056), Expect = 8.240e-279 Identity = 447/522 (85.63%), Postives = 453/522 (86.78%), Query Frame = 3
Query: 582 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXX--AKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2141
TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEE+HDAVLHAQTGSGKTLAFLLPLL RVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGR+SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADE +GEDEE AARLAEVGAG+VTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE+KLAVLR DTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXX AKG EQPPQPPLAEFLR+ELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct: 5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT-------------------------------------------------------------DTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXAKGWDEQPPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 465
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 485 bits (1249), Expect = 1.260e-156 Identity = 298/521 (57.20%), Postives = 356/521 (68.33%), Query Frame = 3
Query: 570 VNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVN---RKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKAL-----GGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2108
++G T+REL+ RLP WL+ RLE+LGFA PTLVQ++AL+ IL HDAVLHAQTGSGKTLAFL+PL A +DPSRA+VQGLVVVPTRELGLQVA VAKRLAA T + ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+L+ LV GAVR N V YVVVDEVDACL S RA+L LLAR LSPT A E +E E +L G VTGAAA + R++R RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H+YV C P +KLA LRALV+RELG DG R LVFA A +PL+ +AA+LD L GG XXXXXXXXXXXXXXXXX PLA+ LRE+LGL RADA++ +R G R+L++TD+AARGLDVPE THVF+ DLP D EGY+HRGGRA V+S+VTP+QEFV++RL N +GV++ ++
Sbjct: 53 LDGDTYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQE----EEAEVPQL--PGGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG-------------------------------------GDGXX--------XXXXAPRALVFAQANRPLDQMAAALDADLRKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVLQRLANAVGVEVAQL 520
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 361 bits (926), Expect = 1.470e-108 Identity = 234/576 (40.62%), Postives = 313/576 (54.34%), Query Frame = 3
Query: 582 TFRELFRG-----RLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAA--GTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEG---------TRASLHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPP-LAEFLREELGLNARADAMSLFR--------------------------------------EGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2141
+F EL+ LP WL R + G+ TPTLVQR++L+ IL D V+ AQTGSGKTL+FLLPLL+++D SR+A+Q ++VVPTRELGLQ++ VA+RLAA G + + KI VM +L+GS NKRQRAWAWA+PPH+V+G P+ LT++V+ G +R NAV +VVVDEVDACLL+ G + LHELL+R LSPT+ DE D D + A+ L A + G++ V+ DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV E +PP LSH YVVC E K LR ++KRE+ A LVF +PLE +AA++ L G + R + + LR E L+AR+ AM+ FR G R+++STD+AARGLDV +++HV N DLP DG+ YVHRGGRAGRLGR G V+SL+T +QEFV++RL N +G+ ++ + R +R
Sbjct: 90 SFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAIL--TGMDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTY-DEVDVLDGDSAS-LVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREVRRGRLRKA---------------------------------------------------LVFCEPQRPLENMAAAIAADLNGT------------------VWTESRNDDIEYAGVIVSVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSKQGQDSGFIEDIDALNQEGVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVLQRLANKLGLAVQCVARQEKEGRKRR 591
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO) HSP 1 Score: 336 bits (861), Expect = 3.080e-100 Identity = 213/523 (40.73%), Postives = 281/523 (53.73%), Query Frame = 3
Query: 582 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVIL-GEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-----TRASLHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEF---LREELGLNARADAMSLFREGK---TRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2108
T + ++ +LP WLL R + LG+ PT +Q AL+V+L E + D V+ A+TGSGKTL +LLP LA +DP+R+ VQ ++VVPTRELGLQVA VAKRL A + KI +MSVL+GS N+RQRAWAWA+PP +VIG PE L+++V G + R N++ VVVDEVDACLL+ + LHELL++ LS T D+ + ED +GA T R+L RQT+ SAT+PQH HFI+QCVQ +WT TEPV V + E + PP L H Y+VC PE KLA L+ ++ L LVFA +PLE +A +L AK + P P+ LR + L RA AM F R+L STD+AARGLDV +THV + DLP D + YVHR GR GRLGR G+V+S V P+QEFV+ RL N + +D++ +
Sbjct: 59 TLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVEDT--------MGALSST----RPKRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLLSSPVPFKV---------------------------------------------------LVFAEEQRPLEEMALAL-------------AWEAEHGVYWQESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANVTHVIHFDLPPDADTYVHRAGRTGRLGRSGQVLSFVAPEQEFVLNRLANKLSLDLRCV 501
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 334 bits (856), Expect = 3.430e-99 Identity = 225/538 (41.82%), Postives = 300/538 (55.76%), Query Frame = 3
Query: 582 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGT-SSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLS-EGTRAS--------------LHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLA---EFLREELGLNARA-DAMSLFRE--------GKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2108
TF E F +P WL +R ++ G+ PTL+Q +A++ IL + +D ++ AQTGSGKTL +LLPLL+R+DP+R+++QG++VVPTRELG+QVA VA+RLAAG+ S +KI VMSVL+GS NKRQRAWA +DPPH+VIG P L +V ++ +AV +VVVDEVDACLL+ +GT S LHELL+R LSPT + EDEE +L+ V G + + DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V E +PP L H YVVC EQK+ L ++ +++ + L R LVF + LE +A L + L + R E P +A EF + L R D +S E G R+L+STD+AARGLD+ +ITHV N DLP +G+ YVHRGGRAGRLGR G V+SL+T +QEFV+ RL N +G+DIK I
Sbjct: 58 TFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDG-NDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQLS-----LVEGGGSRIVSHGTDRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQIMKRKK---------------------------------------------SKLDTTCRVLVFCEPKRHLEEMAEILKRDLS-----------KSLDSVYDVSASVLRYEDPTSVRMAAMEEFRGADTYLGGRIMDEVSEGDEKDTSQGVKGDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVLERLANKLGLDIKCI 529
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 330 bits (847), Expect = 7.040e-97 Identity = 218/561 (38.86%), Postives = 299/561 (53.30%), Query Frame = 3
Query: 564 GPVNGGTFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRE-----SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSEG-------TRASLHELLARSLSPTHADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPCLSHYYVVC-PPEQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFR-EGKT----------------------RLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRR 2132
G ++ +F + LP WL+ + + G+ P+ +Q +AL+ IL E R DAV+ A+TGSGKTLA+LLP LA +D SRAAVQ L+VVPTRELGLQVA VAKRLAA ++ +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L +V G + R N+V ++VVDEVDACLL+ ++LHELL++ LSPT+ D + E ++ R + T + P++ + RQT+FASAT+PQH HF++QC Q QWTL EP HV + ++ +P L H Y VC +QKLA LR LV + S E LVF+ A +PLE +A L + G G+ ++ + LR E L+ RA A+ FR +G T R+L STD+AARGLD+ +I+HV + DLP D + YVHR GR GR GR G+V+ +++P QEFV+ RL N + VD K I ++R
Sbjct: 127 GSLSAESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFERR-DAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTSTKTAT-STRPLSSQ---RQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYAKSVIEPPKKV------------------------------------------------LVFSDARRPLEEMAQILANDIEG---------------GMLWKDGYGKEQERDVRAVVAVLRYEDSLSQRAAAIDSFRGDGYTMASGASQTYTSRDNDSDTAPSLRVLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVLTRLTNKLNVDTKCIARQQKKKR 619
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA) HSP 1 Score: 323 bits (828), Expect = 3.740e-95 Identity = 202/531 (38.04%), Postives = 277/531 (52.17%), Query Frame = 3
Query: 582 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADETDGED---EEEAARLAEVGAG------KVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFAL--ATKPLEGIAAS--LDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2108
+FR+L+ LPDWLL RLE+LGF PTL Q AL + E D VLHAQTGSGKTLA+LLPLLA++DPSRAAVQ L+ VP+RELGLQVA V K+L T+ +E KI VMS LEGS +RQRAWAWA+PPH+VI P L L+ +GA++ + V+YVVVDE D C+L EG + LHELL+RSL+P H + +D E+ L E G + GA + ++ + RQTVF SAT+PQ HF+ Q++W P +V++ + +P LSH + V P E+K LRAL+KRE EA GLVFA + KP E + A L+ L G G+ E L + +R++ + RA + +R G+ ++L+S + RGLDVP+ TH+FN+ LP D Y HR G + +++T ++ F + RL N +GV ++I
Sbjct: 57 SFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE--DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGLEDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEA---------------------------------------------------GLVFAADWSPKPAEEVEAEKLLNPFLDPLGDLAKLLSADLAKSASQEGDGDGKCEGAAPRDLVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIFNMQLPRDTAAYAHRAGXXXXXXXXXNIFTIITEEERFALERLANALGVSFEEI 532
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA) HSP 1 Score: 323 bits (827), Expect = 3.760e-94 Identity = 222/574 (38.68%), Postives = 300/574 (52.26%), Query Frame = 3
Query: 582 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEERHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAG---------TSSGRES----------------------------KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPT--------HADETDGEDEEEAARLAEVGA---------GKVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE-QKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 2138
TF +L+ RLP WLL R+E LG+ PT VQ++AL IL E D V+H+QTG+GKTLAF+LPLLA +D ++ AVQ LVVVP+RELGLQVA VAK+LA+G GR++ KI +MS+LEGS N+RQ+AW A+PPH+VIGNP SL +LV G +R + V VVVDEVDACL S T L LL + LSP+ A T G ++E L GA G+V AP KL RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V E MPP L H Y+V P + K A L A ++RE +A ++F + E +AA L ++ GG +G + RGE + + L + RA M FR G++ LV+TD AARGLDVP ++HV LD+ + + Y+HRGGRAGR+GRPG V+SLV+ + F + RL N + ++++++ + +RP+
Sbjct: 117 TFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAIL--EGEDVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPW--KLVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQAC---------------------------------------------------VIFTADDREAEKMAAILARS-GGLAAGGQ----------------EPRGESS----VVQALVGGEHIARRAKVMDAFRAGESWGLVTTDFAARGLDVPRVSHVIMLDVAGEADTYLHRGGRAGRMGRPGWVVSLVSETEAFALVRLANSLKIEVRRMGV---MKRPR 611
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Match: B8C500_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C500_THAPS) HSP 1 Score: 317 bits (811), Expect = 8.790e-93 Identity = 228/598 (38.13%), Postives = 300/598 (50.17%), Query Frame = 3
Query: 633 LEQLGFATPTLVQRQALEVIL------------GEERH---DAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAG--------------------------------TSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACL-------LSEGTRAS--LHELLARSLSPTH------ADETDGEDEEEAARLAEVGAGKVTGAAAPVNRKLRD-------------RQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE-QKLAVLRALVKRELGVSASEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDGQAGGGGVTNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXAKGRGEQPPQP----PLAEFLREELGLNARADAMSLFR------------------------EGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEG--YVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2108
+ LG+ PTL+Q + L+++L E+++ D ++HAQTGSGKTLA+LLPLL+R+DPSR+AVQ LVVVPTRELGLQV VA+RL G ++ + KI +M +L+GSSN RQRAWAWA+PPHIVIG PE L+ +VT G VRVN+V VVVDEVDACL +S+G +S LHELL+R LSPT+ A +G D R ++ +G + N L RQT+FASAT+PQHNHF++QCV+ WTL EP+ V V E +PP L H YVVC + K+ LR +K+E+ AAA D GG T+ L+F+ +PLE +A L K G G P Q + LR E L RA AM FR K R+L+STD+AARGLD+ I+HV N DLP D +G YVHRGGRAGRLG+ G+V+SL+T QEFV+ RL N + ++++ +
Sbjct: 1 MANLGYVNPTLLQSRVLDILLPTLDTSTSTNESSEQQNQPSDVIIHAQTGSGKTLAYLLPLLSRIDPSRSAVQALVVVPTRELGLQVVRVARRLCGGGRVDVGVTNDDDNETDEGGNDEGVLDDNTDESSTPSKSKKIMIMPLLQGSSNTRQRAWAWAEPPHIVIGTPEELSSMVTRGGVRVNSVKIVVVDEVDACLSRGGNGGMSDGGSSSGTLHELLSRHLSPTYQEVGRVATSVEGSD----GRTFQMSTSSDSGETSVGNHDLSSHTMNGFKVYADKYRQTIFASATIPQHNHFMKQCVRNGWTLREPIRVNVSPGELVPPTLKHVYVVCRDKGTKVGGLRRWMKKEI------AAA------------------------------DDNNGG-----------TKMLIFSDPRRPLETLADMLAKDFNG--------------------IVWREGYTPMQENGYDAVISVLRMEDSLGTRAAAMEGFRGPNERDNGAVGGYANQGSDIGKEKRDKLRILLSTDLAARGLDISGISHVINFDLPNDNDGDTYVHRGGRAGRLGKKGQVMSLITADQEFVLERLANRLALELRCV 527 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig941.30923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig941.30923.1 >prot_Ecto-sp8_S_contig941.30923.1 ID=prot_Ecto-sp8_S_contig941.30923.1|Name=mRNA_Ecto-sp8_S_contig941.30923.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=695bp MSVPRKVLLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGSback to top mRNA from alignment at Ecto-sp8_S_contig941:11974..18031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig941.30923.1 ID=mRNA_Ecto-sp8_S_contig941.30923.1|Name=mRNA_Ecto-sp8_S_contig941.30923.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6058bp|location=Sequence derived from alignment at Ecto-sp8_S_contig941:11974..18031+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig941:11974..18031+ >mRNA_Ecto-sp8_S_contig941.30923.1 ID=mRNA_Ecto-sp8_S_contig941.30923.1|Name=mRNA_Ecto-sp8_S_contig941.30923.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2085bp|location=Sequence derived from alignment at Ecto-sp8_S_contig941:11974..18031+ (Ectocarpus species8 EcLAC_412)back to top |