mRNA_Ecto-sp8_S_contig9407.30916.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI) HSP 1 Score: 507 bits (1306), Expect = 6.940e-178 Identity = 301/333 (90.39%), Postives = 302/333 (90.69%), Query Frame = 1
Query: 106 MHAKGATLRALWLTAAVATAISGPRSSASASTGASSSAFVGAAAATVAPLEPFHVRAPHWGARSSPTRRSSPSSXXXXXXXXXXXXXXXXXRETQRQQKNDDLLQRPHASPVAAAVAPKNTLPLMGKALFVTGGGAGAGAAGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEEK 1104
MHAKGATLRALWLTAAVATAISGPRSSASASTGASSSAFVGAAAATVAPLEPFHVRAPHWGARSSPT RSSP XXXXXXXXXXXXXXXXXRETQRQQKNDDLLQRPHASPVAAAVAPKNTLPLMGKALFVTGGGAGAGAAGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSR GFQKKFSPLVVKRALTLD AAAA PAADGGQK RRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEE+K
Sbjct: 1 MHAKGATLRALWLTAAVATAISGPRSSASASTGASSSAFVGAAAATVAPLEPFHVRAPHWGARSSPTPRSSPXXXXXXXXXXXXXXXXXXXRETQRQQKNDDLLQRPHASPVAAAVAPKNTLPLMGKALFVTGGGAGAGAAGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL----------------------GFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEKK 311
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A6H5JS44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS44_9PHAE) HSP 1 Score: 259 bits (662), Expect = 6.470e-82 Identity = 158/181 (87.29%), Postives = 158/181 (87.29%), Query Frame = 1
Query: 106 MHAKGATLRALWLTAAVATAISGPRSSASASTGASSSAFVGAAAATVAPLEPFHVRAPHWGARSSPTRRSSPSSXXXXXXXXXXXXXXXXXRETQRQQKNDDLLQRPHASPVAAAVAPKNTLPLMGKALFVTGGGAGAGAAGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSR 648
M AKG TLR LWLTAAVATAISGPRSSASASTG SSSAFVGAAAATVAPLEPFHVRAP WGARSSPT R XXXXXXXX RETQR QKNDDLLQRPHASPVAAAVAPKN LPLMGKALFVTGGGAGAGAAGKGEPAGFGVASAWGVVSVVFILMNAV RLAPIAMQPFSR
Sbjct: 1 MRAKGETLRTLWLTAAVATAISGPRSSASASTGGSSSAFVGAAAATVAPLEPFHVRAPRWGARSSPTPRXXXXXXXXXXXXXMSIAFASAARETQRHQKNDDLLQRPHASPVAAAVAPKNALPLMGKALFVTGGGAGAGAAGKGEPAGFGVASAWGVVSVVFILMNAVTRLAPIAMQPFSR 181
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A6H5KSH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH0_9PHAE) HSP 1 Score: 239 bits (610), Expect = 5.620e-75 Identity = 122/142 (85.92%), Postives = 128/142 (90.14%), Query Frame = 1
Query: 676 MYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEE 1101
MYAGFSA+MAYAEGFKGFQ+KFSPLVVKRALTLDPAA RAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARA+LG+APSIDPALPE++
Sbjct: 1 MYAGFSAIMAYAEGFKGFQQKFSPLVVKRALTLDPAAXXXXXXXXXXXXXXRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAVLGRAPSIDPALPEKK 142
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.500e-67 Identity = 114/184 (61.96%), Postives = 135/184 (73.37%), Query Frame = 1
Query: 550 FGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEE 1101
FG+ASAWGV+SV+ IL NAVKRLAPIAMQPF GD T W MY GF+ LMAYAEG+K FQKKFSP+VV+RALTLD + AGPLRL+LAGPYSMGLFHA++KRK VSW+L+ VL LVQ V++LPYPWRSI+D GVV GLS+G+ +I W R+ G P +D LP EE
Sbjct: 96 FGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLD----------------KSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEE 263
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA) HSP 1 Score: 208 bits (530), Expect = 9.430e-62 Identity = 112/212 (52.83%), Postives = 143/212 (67.45%), Query Frame = 1
Query: 487 ALFVTGGGAGAGAAGKGEP------AGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEEK 1104
AL ++GGG G G + P + FG ASAWGV+SV+ IL A++RL PIA+QPF GD + WA+Y F ALMAY EG K FQKKFSP+VV+RALTLD A R GPLR++LAGPY MGLF+AT+KRK VSW+L V+ LV +V++LPYPWRSI+DAGVV GLS+G +I W R+ G+AP +D +PE ++
Sbjct: 20 ALRLSGGGIGRGKSVAPPPPSAPARSSFGFASAWGVLSVLSILAGALRRLVPIALQPFKAGDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQA-------------RTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPESKE 218
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA) HSP 1 Score: 195 bits (495), Expect = 9.730e-56 Identity = 104/189 (55.03%), Postives = 133/189 (70.37%), Query Frame = 1
Query: 550 FGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGD----FTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEEK 1104
F +++ WGVV VV +L NA++RL PIA++PF + FT + WA Y GF+ +MAYAEG+KGFQ KFSPLVVKRALTL P R+ L +LA PYSMGLFHA+KKR+ VSW++ GV+ LV+ VK L +P+RSIVDAGVV GLS+G LSI I+A+A+ G PSIDPALP+ +K
Sbjct: 116 FSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGP----------------RSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKK 288
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU) HSP 1 Score: 192 bits (487), Expect = 3.700e-55 Identity = 99/184 (53.80%), Postives = 125/184 (67.93%), Query Frame = 1
Query: 553 GVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEEK 1104
G+ +AWGV + IL A+ RLAPIAMQP + D T +QW +Y G A AY EG+K FQ KFSPLVV+RA+TL + P L +LA YSMGLFHA+KKRKTVSWS++ GV C++ +VKRLPYPWRS+VDAGV GL +G SI VI+ RA+ GK+P +DP LP+E+K
Sbjct: 72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPL-------------LHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 242
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA) HSP 1 Score: 186 bits (473), Expect = 2.340e-53 Identity = 95/180 (52.78%), Postives = 121/180 (67.22%), Query Frame = 1
Query: 553 GVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALP 1092
G+A AWGV + IL +A+KRLAPIAMQPF + D + +QW Y G + AY EG+ FQKKFSPLVV+RA+TL ++ P+ + LA YSMGL HATKKRK VSWS++ V +V +VKRLPYPWRSIVDAGV GL++G +SI +I+ARA+ G P +DP LP
Sbjct: 55 GIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTL----------------KQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLP 218
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A7R9U4X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X8_9STRA) HSP 1 Score: 180 bits (456), Expect = 3.510e-50 Identity = 92/182 (50.55%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 553 GVASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEE 1098
GVA+ WGV+ V ++L+N ++RL PIA++PF RGDF WA YAGF+ MAYAEG KGFQKKF P VV+RA L KG PL + A + MGLFHA+KKRK +SWSL GV ++Q+ KRL YPW +IVDAG VVGL +G +S+ + R++ G+ PSI LP E
Sbjct: 104 GVAATWGVLGVFYVLLNGLRRLVPIAVEPFQRGDFGLGLWAAYAGFAVFMAYAEGVKGFQKKFCPFVVRRAQLL--------------KGSTN--PLHCIFAPFFCMGLFHASKKRKILSWSLLIGVFGIIQVAKRLAYPWNAIVDAGAVVGLGWGCISLGATYVRSLFGQVPSISAELPSE 269
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT) HSP 1 Score: 177 bits (448), Expect = 1.090e-49 Identity = 97/178 (54.49%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 559 ASAWGVVSVVFILMNAVKRLAPIAMQPFSRGDFTTVQWAMYAGFSALMAYAEGFKGFQKKFSPLVVKRALTLDPAAAAAPAADGGQKGRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALP 1092
AS WGVV V+ IL NA+ RLAPIA +PF G + WA YA A AY EG+K FQ KFSPLVV RA TL P Q GR A LR +LA YSMGLFHAT+KRK +SW+++ V+ +V +VKRLPYPWRSIVDAGVV GL++G SI I+ +AI G P++ LP
Sbjct: 52 ASHWGVVGVMAILANAIGRLAPIAAEPFRYGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGP-----------QGGRATA--LRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9407.30916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9407.30916.1 >prot_Ecto-sp8_S_contig9407.30916.1 ID=prot_Ecto-sp8_S_contig9407.30916.1|Name=mRNA_Ecto-sp8_S_contig9407.30916.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=334bp MHAKGATLRALWLTAAVATAISGPRSSASASTGASSSAFVGAAAATVAPLback to top mRNA from alignment at Ecto-sp8_S_contig9407:2309..5514- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9407.30916.1 ID=mRNA_Ecto-sp8_S_contig9407.30916.1|Name=mRNA_Ecto-sp8_S_contig9407.30916.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3206bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9407:2309..5514- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9407:2309..5514- >mRNA_Ecto-sp8_S_contig9407.30916.1 ID=mRNA_Ecto-sp8_S_contig9407.30916.1|Name=mRNA_Ecto-sp8_S_contig9407.30916.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1002bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9407:2309..5514- (Ectocarpus species8 EcLAC_412)back to top |