mRNA_Ecto-sp8_S_contig94043.30912.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: D7FSU2_ECTSI (Gill-specific calpain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU2_ECTSI) HSP 1 Score: 156 bits (394), Expect = 4.930e-43 Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 1
Query: 16 QVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDGGVADKESEKRRQDLWAKMKKW 240
QVWG LIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDGGVADKESEKRRQ LWAKMKKW
Sbjct: 135 QVWGPLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDGGVADKESEKRRQHLWAKMKKW 209
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A7R9PZM3_9ACAR (Hypothetical protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9PZM3_9ACAR) HSP 1 Score: 57.8 bits (138), Expect = 6.830e-8 Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 16 QVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDG 177
Q+W LIEKA AKLHGCYE+L G +GL LTG P PL P S+ +G
Sbjct: 331 QLWVPLIEKALAKLHGCYEALVSGRAIEGLSTLTGAPCESIPLQSSTPSSNEEG 384
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A7R9QH69_9ACAR (Hypothetical protein n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9QH69_9ACAR) HSP 1 Score: 57.8 bits (138), Expect = 6.940e-8 Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 16 QVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDG 177
Q+W LIEKA AKLHGCYE+L G +GL LTG P PL P S+ +G
Sbjct: 863 QLWVPLIEKALAKLHGCYEALVSGRAIEGLSTLTGAPCESIPLQSSTPSSNEEG 916
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: E0V998_PEDHC (Calpain D, putative n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0V998_PEDHC) HSP 1 Score: 57.4 bits (137), Expect = 9.520e-8 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1
Query: 16 QVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWD 174
Q+W LIEKA AK+HGCYE+L G +GL LTG P PL P S++D
Sbjct: 1142 QLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQPSSPPSEYD 1194
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A7R8XC64_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XC64_9CRUS) HSP 1 Score: 57.0 bits (136), Expect = 1.260e-7 Identity = 30/69 (43.48%), Postives = 39/69 (56.52%), Query Frame = 1
Query: 16 QVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPL--------IRTPLTGLEPKSDWDGGVADKES 198
Q+W LIEKA AKLHGCYE+L G++ +GL LTG P + P LEP W V+ +E+
Sbjct: 159 QLWVPLIEKAMAKLHGCYEALASGNVIEGLAILTGAPCESLLLQPSSQAPEDALEPDLIWAQLVSSREA 227
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A2T7PMQ3_POMCA (Calpain catalytic domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PMQ3_POMCA) HSP 1 Score: 57.0 bits (136), Expect = 1.270e-7 Identity = 28/51 (54.90%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 13 MQVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKS 165
MQ+W LIEKA AKLHGCYE+L G +GL LTG P PL E K+
Sbjct: 208 MQLWVPLIEKAMAKLHGCYEALVSGKCIEGLATLTGAPCESIPLQADEQKA 258
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: UPI000D736251 (calpain-15-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D736251) HSP 1 Score: 57.0 bits (136), Expect = 1.290e-7 Identity = 28/51 (54.90%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 13 MQVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKS 165
MQ+W LIEKA AKLHGCYE+L G +GL LTG P PL E K+
Sbjct: 504 MQLWVPLIEKAMAKLHGCYEALVSGKCIEGLATLTGAPCESIPLQADEQKA 554
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A7S0J6V3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6V3_9EUKA) HSP 1 Score: 53.1 bits (126), Expect = 2.970e-7 Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 1
Query: 16 QVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDGGVAD 189
Q+W L+EKAFAKL+GCYE+L G++ + L LTG P R L + G AD
Sbjct: 5 QLWVPLLEKAFAKLYGCYEALEGGTVGEALATLTGFPCERLTLQSRRSSAACRGSSAD 62
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A6B2L0T4_9EUKA (Calpain catalytic domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L0T4_9EUKA) HSP 1 Score: 55.5 bits (132), Expect = 4.380e-7 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 1 RPTEMQVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTP 126
R T Q+W SL+EKA AKLHG YE++ GSIE GLR LTG P
Sbjct: 133 RSTHGQLWVSLVEKAHAKLHGSYEAVVSGSIEDGLRELTGVP 174
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Match: A0A7S0TZU0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TZU0_HEMAN) HSP 1 Score: 55.1 bits (131), Expect = 5.910e-7 Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 4 PTEMQV-WGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKSDWDGGVADKESEKRRQDLWAKMKKW 240
P++ +V W SL+EKA+AK HGCYE+L +G+I+ GL+ LTG PL KS G LW+++ +W
Sbjct: 14 PSKQRVMWVSLLEKAYAKAHGCYENLSKGTIQYGLKDLTGGAPQVLPLDDDSVKSKVVNGT-----------LWSQLLEW 82 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94043.30912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig94043.30912.1 >prot_Ecto-sp8_S_contig94043.30912.1 ID=prot_Ecto-sp8_S_contig94043.30912.1|Name=mRNA_Ecto-sp8_S_contig94043.30912.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=76bp MQVWGSLIEKAFAKLHGCYESLGRGSIEQGLRCLTGTPLIRTPLTGLEPKback to top mRNA from alignment at Ecto-sp8_S_contig94043:43..282- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig94043.30912.1 ID=mRNA_Ecto-sp8_S_contig94043.30912.1|Name=mRNA_Ecto-sp8_S_contig94043.30912.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=240bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94043:43..282- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig94043:43..282- >mRNA_Ecto-sp8_S_contig94043.30912.1 ID=mRNA_Ecto-sp8_S_contig94043.30912.1|Name=mRNA_Ecto-sp8_S_contig94043.30912.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=228bp|location=Sequence derived from alignment at Ecto-sp8_S_contig94043:43..282- (Ectocarpus species8 EcLAC_412)back to top |