mRNA_Ecto-sp8_S_contig9394.30889.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9394.30889.1
Unique NamemRNA_Ecto-sp8_S_contig9394.30889.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 4.750e-78
Identity = 138/189 (73.02%), Postives = 145/189 (76.72%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHDMTMGMAHRGGVGXXXXXXXXXGTRSRTSSSKARLENNPGEQEILPPRAGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMHSGSRGAGMPSSMAR 567
            MYEFFPGSGDQDDLQSNIINEPLDPLWKSK     G   +GG           G + R     AR   +P + ++L           AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGK+VSVLEGGYGQNQCESMHSGSRG GM SSMAR
Sbjct:  307 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGG-----------GRQGRXRGGGAR---HP-QPDVL-----------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQNQCESMHSGSRGPGMHSSMAR 469          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 3.610e-74
Identity = 138/189 (73.02%), Postives = 145/189 (76.72%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHDMTMGMAHRGGVGXXXXXXXXXGTRSRTSSSKARLENNPGEQEILPPRAGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMHSGSRGAGMPSSMAR 567
            MYEFFPGSGDQDDLQSNIINEPLDPLWKSK     G   +GG           G + R     AR   +P + ++L           AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGK+VSVLEGGYGQNQCESMHSGSRG GM SSMAR
Sbjct: 1931 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGG-----------GRQGRXRGGGAR---HP-QPDVL-----------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQNQCESMHSGSRGPGMHSSMAR 2093          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A6H5JWK6_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK6_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 2.610e-50
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 1
Query:  316 MLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMHSGSRGAGMPSSMAR 567
            MLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGK+VSVLEGGYGQNQCES HSGSRGAGMPSSMAR
Sbjct:    1 MLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQNQCESTHSGSRGAGMPSSMAR 84          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A1E7FK49_9STRA (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK49_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.450e-43
Identity = 88/187 (47.06%), Postives = 105/187 (56.15%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKS--------KHDMTMGMAHRG-----------GVGXXXXXXXXXGTRSRTSSSKARLENNPGEQEILPPRAGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAARE-GLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYG 501
             Y+F+PG+GD+DDL  NIIN P+ PLWK         +H+      +RG           G             RSR SS      N PG         GR+ YR +IQ RLLPALRAFNP LI++SAGFDA KGDVGN K       + G+DL  EDY WTT KI  +ADICC G++VSVLEGGYG
Sbjct:   50 QYKFYPGTGDEDDLPLNIINVPITPLWKEGNQTPVQREHNTRHRTRNRGSQSDDGSSSETGTPRVSDAEVESRIRSRASSPVPFNANAPG---------GRMAYRNSIQNRLLPALRAFNPDLILISAGFDACKGDVGNAKHEMGGKEKMGIDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 227          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A7S1GN08_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN08_CYCTE)

HSP 1 Score: 150 bits (378), Expect = 9.810e-42
Identity = 89/208 (42.79%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    4 YEFFPGSGDQDDLQSNIINEPLDPLWKSKHDM------TMG----------------------------MAHRGGVGXXXXXXXXXG-TRSRTSSSKARLENNPGEQEILPPRAGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAA-REGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCES 519
            Y F+PG+GD+DD+ +NIIN P+ PLW+  H        TM                             M+  GGV            T+S  ++S+  +  +P    +     GR  YR AIQ RLLPALRAFNP LI++SAGFDAA+GDVGN +  A    R GLDL  EDY WTT KI  +ADICC G++VSVLEGGYG+    S
Sbjct:   18 YSFYPGTGDEDDVANNIINVPITPLWREFHGSSSPVPSTMNTHNTRHKAKQKAAASSAASTPREGANEDMSDYGGVERSSDTESETASTKSAAATSRRNISPSPKNTNM-----GRQAYRRAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHYAGGKERMGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGRTPIPS 220          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.160e-41
Identity = 88/197 (44.67%), Postives = 114/197 (57.87%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHDMTMGMAHRGGVGXXXXXXXXXGTRSRTSSSKARLENNPG-----EQEILP--PRA-------------GRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAARE-GLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMHS 528
             Y+F+PG+GD+DDL  NIIN P+ PLWK  + + +G  H               TR R S S     +  G     + E+ P  PRA             GR  YR++IQ RLLPALRAFNP LI++SAGFDA KGDVGN K       + G+DL  EDY WTT K+  +ADICC G++VSVLEGGYG++    +++
Sbjct: 1005 QYKFYPGTGDEDDLPLNIINVPITPLWKDSNQIPVGGTHN----------TRRQTRKRASQSDDGSSSETGTSRLSDAEVDPKLPRASSPTTSGSSGAGGGRQAYRKSIQSRLLPALRAFNPDLILISAGFDACKGDVGNAKHEIGGKEKMGIDLEPEDYAWTTSKVLEIADICCQGRVVSVLEGGYGRHPVSGVYN 1191          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.420e-41
Identity = 84/168 (50.00%), Postives = 101/168 (60.12%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHDMTMGMAHRGGVGXXXXXXXXXGTRSRTSSSKARLENNPGEQEILPPRAGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQ 504
            MYEFFPGSG  DD   NIIN P+ PLW++K     G   RGG                           PG    +   +GR  +REAI  RLLPALRAFNPQLI++S+GFDA +GDVGN K  AR +  G DL+  DY W TE++Q VAD+CC G+LVSVLEGGYG+
Sbjct:  139 MYEFFPGSGAGDDTALNIINVPVQPLWRAKGGRGGGGXXRGGP--------------------------PG----VANGSGRAAFREAITARLLPALRAFNPQLILMSSGFDAVEGDVGNAKH-ARHSHAGCDLTPSDYAWITERVQEVADMCCEGRLVSVLEGGYGR 275          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A7R9ZPI6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPI6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 6.090e-41
Identity = 86/209 (41.15%), Postives = 108/209 (51.67%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWK-----------SKHDMTMGMAHRGGVGXXXXXXXXXGTRSRTSSSKARLENNPGEQEILP------------------PRAGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMHSGSRG 540
             Y+F+PG+GD+DD+  NIIN P+ P+WK           S H+       R                 R S     +E+ P E   L                   P +GR+ YR AIQ RLLPALRAFNP LI++SAGFDA++ DVGN K      R G+DL  EDY WTT KI  +ADICC G++VSVLEGGYG+       S + G
Sbjct:   74 QYKFYPGTGDEDDVAMNIINVPIMPMWKEPATATTPATRSSHNTRQKTRKRTVDDKTDGDVSSDAGTPRASD----VESIPNEATSLRSATTSPVPPGVSGNGGNGPNSGRVAYRNAIQSRLLPALRAFNPDLILISAGFDASRDDVGNAKHEVNRERRGMDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGRTPQTQSSSAAHG 278          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.380e-40
Identity = 88/199 (44.22%), Postives = 110/199 (55.28%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHDMTMGMAHRGGVGXXXXXXXXXGTRSRT-----------SSSKARLENNPGEQEILPPRA-------------GRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMH 525
             Y+F+PG+GD+DDL  NIIN P+ PLWK  +   +G  H               TR RT           SS     + +  E +I   RA             GR  YR+AIQ RLL ALRAFNP LI++SAGFDA KGDVGN K      + G+DL  EDY WTT KI  +ADICC G++VSVLEGGYG++    ++
Sbjct: 1019 QYKFYPGTGDEDDLPLNIINVPITPLWKEGNQFQIGGTHN--------------TRHRTRIRANQSDDGSSSETGTPKVSDAEVDIKMSRASSPTSFSSSGSGGGRQAYRKAIQNRLLXALRAFNPDLILISAGFDACKGDVGNAKHLGGKEKMGIDLEPEDYAWTTRKILEIADICCKGRVVSVLEGGYGRHPXSGVY 1203          
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.210e-39
Identity = 91/209 (43.54%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    1 MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHD------MTMGMAHRGGVGXXXXXXXXXGTRS----RTSSSKARLENNPGEQEILPPR------AGRLCYREAIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAARE--GLDLSSEDYLWTTEKIQSVADICCGGKLVSVLEGGYGQNQCESMHSGSRGAGMPSSMARCA 573
             Y+F+PG+G +DDL  NI+N P+ PLW+ ++        T    H+   G            S    R S+  + +E          P+      +GR+ YR+AIQ RLLPALRAFNP LI++SAGFDAA+GDVGN +   R  RE  GLDL SEDY WTT KI  +ADICC G++VSVLEGGYG++   S+ + +      S +A CA
Sbjct:  909 QYKFYPGTGSEDDLALNILNVPIQPLWRDQNPPATPALRTHNTRHKA-KGAPKSTSDTQDDSSVGTPRGSAKNSDVEAGSMSAGSTTPQPGSGGSSGRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARH-ERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYGRSAPPSVDTPNEAGLDRSVLAECA 1115          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9394.30889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG61_ECTSI4.750e-7873.02Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LG60_ECTSI3.610e-7473.02Histone deactylase of possible bacterial origin wi... [more]
A0A6H5JWK6_9PHAE2.610e-5097.62Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A1E7FK49_9STRA1.450e-4347.06Hist_deacetyl domain-containing protein (Fragment)... [more]
A0A7S1GN08_CYCTE9.810e-4242.79Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S4AC53_9STRA2.160e-4144.67Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A835YI51_9STRA2.420e-4150.00Histone deacetylase domain-containing protein n=1 ... [more]
A0A7R9ZPI6_9STRA6.090e-4141.15Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A448YY97_9STRA1.380e-4044.22Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6S8HTR1_9STRA2.210e-3943.54Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9394contigEcto-sp8_S_contig9394:147..1431 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score253.8
Seed ortholog evalue6.3e-65
Seed eggNOG ortholog2880.D8LG60
Model size576
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.NAD-dependent histone deacetylase activity (H3-K14 specific)
EggNOG OGsCOG0123@1,COG0666@1,KOG0724@1,KOG0724@2759,KOG1343@2759,KOG4177@2759
Cds size576
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145295.687859-CDS-Ecto-sp8_S_contig9394:146..2871681145295.687859-CDS-Ecto-sp8_S_contig9394:146..287Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9394 147..287 -
1681145295.7071002-CDS-Ecto-sp8_S_contig9394:755..9291681145295.7071002-CDS-Ecto-sp8_S_contig9394:755..929Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9394 756..929 -
1681145295.7206187-CDS-Ecto-sp8_S_contig9394:1170..14311681145295.7206187-CDS-Ecto-sp8_S_contig9394:1170..1431Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9394 1171..1431 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9394.30889.1prot_Ecto-sp8_S_contig9394.30889.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9394 147..1431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9394.30889.1

>prot_Ecto-sp8_S_contig9394.30889.1 ID=prot_Ecto-sp8_S_contig9394.30889.1|Name=mRNA_Ecto-sp8_S_contig9394.30889.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=192bp
MYEFFPGSGDQDDLQSNIINEPLDPLWKSKHDMTMGMAHRGGVGRGGVGG
GGHGTRSRTSSSKARLENNPGEQEILPPRAGRLCYREAIQRRLLPALRAF
NPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVA
DICCGGKLVSVLEGGYGQNQCESMHSGSRGAGMPSSMARCA*
back to top

mRNA from alignment at Ecto-sp8_S_contig9394:147..1431-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9394.30889.1 ID=mRNA_Ecto-sp8_S_contig9394.30889.1|Name=mRNA_Ecto-sp8_S_contig9394.30889.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1285bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9394:147..1431- (Ectocarpus species8 EcLAC_412)
ATGTACGAGTTCTTCCCCGGGAGCGGAGACCAAGATGACCTCCAGAGCAA CATCATCAACGAGCCTCTGGACCCCCTCTGGAAGAGCAAGCACGACATGA CCATGGGTATGGCGCACAGGGGGGGGGTCGGCAGGGGCGGGGTAGGGGGG GGGGGGCACGGCACCCGCAGCCGGACGTCCTCCTCGAAGGCTAGGCTGGA GAACAACCCGGGGGAGCAGGAGATTCTTCCGCCTCGGGCGGGCCGCCTCT GCTACCGCGAGGTGGGTCGTGGTGTTGTTGGCGATGTTGTTGGCGGTGGT ATTCCTGTTCCTGGTGATTCTGTAGGCTTGGGTGTCCCCCGCCCCCCCCC GTGCTCAACTTGTTTTCTTTCGCGCAGGCATCTTGTTCTTGCATCTTCTT CATCATGCACCTCGACAAGGATTTTAACAGCTCGGTACAACGCCCCCCTC TCCTCTGCTGCAACATTACCCCAAACCTTGTCGTCATTGTTGGTGTCCCC AGGCGATCCAGCGGAGGCTACTGCCCGCCCTGCGAGCCTTCAACCCTCAG CTGATCATGCTAAGCGCCGGGTTCGATGCCGCGAAGGGGGACGTCGGGAA CTGCAAGCAGGGCGCAAGGGCGGCGCGGGAGGGGCTTGACCTCAGCTCGG AGGACTACCTCTGGACCACAGAGAAGGTGCTTGATTTTGTATCTACTGTG TCGACGTGTCTTGATTTAGTTGTTCGCGCATGTGGTATGTATACGTATCC TTGGTTTGAACAAAGTCTGCCGGGGTTTCACCCGTCCGGGTAAGTGTTTG TTTGTGCCCGTCTTCATTTTTCGTGTACACGGGCATGTACGTGTGTATGT GTATGTTTGTATGTGCGTGTTGACATCGCCTGTCGGCAAGAGTAGTTTGG ACCCACTAGTCGGGGGCCACACAGCAGAGAGGAAGGGAACCAACCCCAAC GAAATCCCATTTTTTTTTTTGTATGTCTCTCCATGCTTCCTTTTGGCGTT ATTTGTCCATGTGCATGCATGTGGTCGCTTGCGTAGTCTCGATCGACGGA CTTATCCGTCGTGACACCATTGGTGTGCGCGCGTGTGACCCAAGTCTTTG GTGTGTCTGCACACCATCACTGCTGCTGTTGGCCCTTGGCGCAGATCCAA AGCGTGGCAGACATCTGCTGCGGAGGCAAGTTGGTGAGCGTCTTGGAGGG CGGCTACGGGCAGAACCAGTGCGAAAGCATGCACTCTGGTTCCCGAGGGG CCGGGATGCCTTCGTCCATGGCCAGGTGCGCGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9394:147..1431-

>mRNA_Ecto-sp8_S_contig9394.30889.1 ID=mRNA_Ecto-sp8_S_contig9394.30889.1|Name=mRNA_Ecto-sp8_S_contig9394.30889.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9394:147..1431- (Ectocarpus species8 EcLAC_412)
ATGTACGAGTTCTTCCCCGGGAGCGGAGACCAAGATGACCTCCAGAGCAA
CATCATCAACGAGCCTCTGGACCCCCTCTGGAAGAGCAAGCACGACATGA
CCATGGGTATGGCGCACAGGGGGGGGGTCGGCAGGGGCGGGGTAGGGGGG
GGGGGGCACGGCACCCGCAGCCGGACGTCCTCCTCGAAGGCTAGGCTGGA
GAACAACCCGGGGGAGCAGGAGATTCTTCCGCCTCGGGCGGGCCGCCTCT
GCTACCGCGAGGCGATCCAGCGGAGGCTACTGCCCGCCCTGCGAGCCTTC
AACCCTCAGCTGATCATGCTAAGCGCCGGGTTCGATGCCGCGAAGGGGGA
CGTCGGGAACTGCAAGCAGGGCGCAAGGGCGGCGCGGGAGGGGCTTGACC
TCAGCTCGGAGGACTACCTCTGGACCACAGAGAAGATCCAAAGCGTGGCA
GACATCTGCTGCGGAGGCAAGTTGGTGAGCGTCTTGGAGGGCGGCTACGG
GCAGAACCAGTGCGAAAGCATGCACTCTGGTTCCCGAGGGGCCGGGATGC
CTTCGTCCATGGCCAGGTGCGCGTGA
back to top