mRNA_Ecto-sp8_S_contig9381.30868.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9381.30868.1
Unique NamemRNA_Ecto-sp8_S_contig9381.30868.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI)

HSP 1 Score: 873 bits (2255), Expect = 0.000e+0
Identity = 457/483 (94.62%), Postives = 470/483 (97.31%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            ASSFTFGRFLSGYVWGSATD+IGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTR ISMVIGTGIGGLLAQPALHYPT FSPTGLFAMYPFLLPNLVGAVLS+FALFLVIFYLPETKDYNKRRFSRDSVRTAST PRRSPSASPGRSSRK CGSSTS I+STNPTESPSLHLQQXXXXXXGRQKKLPYGADIDR+EKG GAPLYQHLSQEPLAGDASFPASAAE+TTDGSKSSTCATDELSA EQGDEEQGLFGPGGLLARPHVK+VLFLGCI +TLAIGFDEVYPLYALSTPSVGGLGWN VQIGQVMV+AGLLLA+CQLVL PPFIKMVGITY+QRLGCGVGVA+FLAVPGLTSIGWDYDSLFSLSVVANNLI+ SLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVS STL+AFGGWVDYH V
Sbjct:   39 ASSFTFGRFLSGYVWGSATDIIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPETKDYNKRRFSRDSVRTASTDPRRSPSASPGRSSRKNCGSSTSAINSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRREKGEGAPLYQHLSQEPLAGDASFPASAAEKTTDGSKSSTCATDELSAAEQGDEEQGLFGPGGLLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHLV 521          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: A0A6H5JH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE)

HSP 1 Score: 517 bits (1331), Expect = 5.530e-179
Identity = 276/322 (85.71%), Postives = 291/322 (90.37%), Query Frame = 1
Query:  484 SRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            SRDSVRTA T  RRSPSASPGRSS KI GSS S I+STNPTESPS HLQQ      GRQKKLP+GADI R+EKG G PLYQ LSQEPLAGDASFPASAAE+TTDGSKSS CATDELSA EQ DE Q LFGPGGLLAR HVK+VLFLGCI++TLAIGFDEVYPLYALSTPSVGGLGWN VQIGQV+VMAGL+LA+CQ VL P FIKMVGIT +QRLGCGVGVA+FLAVPGLTSIGWDYDSLFSLSVVANNLI+ SLGSI+LALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVS STL+AFGGWVDYHFV
Sbjct:   31 SRDSVRTAITDTRRSPSASPGRSSSKIRGSSVSPINSTNPTESPSSHLQQQQQQHQGRQKKLPHGADIYRREKGEGVPLYQRLSQEPLAGDASFPASAAEKTTDGSKSSGCATDELSASEQVDE-QSLFGPGGLLARRHVKLVLFLGCISATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVLVMAGLMLAVCQFVLFPSFIKMVGITSFQRLGCGVGVATFLAVPGLTSIGWDYDSLFSLSVVANNLILCSLGSITLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHFV 351          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: D7G0L9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 8.000e-159
Identity = 255/483 (52.80%), Postives = 305/483 (63.15%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            ASSFTFGRFLSGY WG  TD +GRKPVII+GLLS+  FS++FG+S +Y+MAITTR +LGLTNGIMPALRT+LSEVCG +HVV GMTY S    IS++ GTGIGGLLAQPALHYP FFS TGLF  +PFLLPNL+GAV+S+  L L++F+LPETKDY                                                                                   + QH                               DE+S  ++GDE  GL GP GLLA PHVK+VLFL CI ST++IGFDEVYPL+A STP VGGLGW+ V+IG+V+VM G+L+A CQL+L PP IKMVGIT +QRLGC +G+A+FLA+P +    W+++SL  +SV AN L   S G++ LALS+GSTTLVPS MRGKLGGL+NTAESLGRF GP GYA  YAWSVS STL AFGGWVD+ FV
Sbjct:   38 ASSFTFGRFLSGYFWGFVTDRLGRKPVIIMGLLSMITFSVLFGISRSYTMAITTRLVLGLTNGIMPALRTTLSEVCGKKHVVRGMTYTSAATAISLIFGTGIGGLLAQPALHYPGFFSATGLFGRFPFLLPNLMGAVMSVLTLILIVFFLPETKDY-----------------------------------------------------------------------------------VEQHSG---------------------------VADEVSVSKKGDEP-GLLGPSGLLATPHVKMVLFLTCIISTVSIGFDEVYPLFAFSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVFSWNFNSLVGVSVAANTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDHRFV 409          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: A0A6H5JRQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ3_9PHAE)

HSP 1 Score: 447 bits (1150), Expect = 9.180e-149
Identity = 259/533 (48.59%), Postives = 308/533 (57.79%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGT--------------------------------------------------RTISMVIGTGIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            ASSFTFGRFLSGY WG  TD  GRKPVII+GLLS+  FS++FG+S +Y+MAITTR +LGLTNGIMPALRT+LSEVCG +HVV GMTY SGT                                                    IS++ GTGIGGLLAQPALHYP FFS TGLF  +PFLLPNLVGAV+S+  L LV+F+LPETKDY                                                                            E+  G P                                   +++S  ++G+E  GL GP GLLA PHVK+VLFL CI ST++IGFDEVYPL+ALSTP VGGLGW+ V+IG+V+VM G+L+A CQL+L PP IKMVGIT +QRLGC +G+A+FLA+P +    W+++SL  +SV AN L   S G++ LALS+GSTTLVPS MRGKLGGL+NTAESLGRF GP GYA  YAWSVS STL AFGGWVDY FV
Sbjct:  154 ASSFTFGRFLSGYFWGFVTDRFGRKPVIIMGLLSMITFSVLFGISRSYTMAITTRLVLGLTNGIMPALRTTLSEVCGKKHVVQGMTYTSGTFFFTSAIICTIPSLVLASRPHFSRACRVQCHAPLGPAKHLGFFECCSAAATAISLIFGTGIGGLLAQPALHYPEFFSATGLFGRFPFLLPNLVGAVMSVLVLVLVVFFLPETKDY---------------------------------------------------------------------------VEQHSGVP-----------------------------------EQVSVSKKGNEP-GLLGPSGLLATPHVKMVLFLTCIISTVSIGFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVFSWNFNSLVGVSVAANTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDYRFV 575          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 9.900e-138
Identity = 238/503 (47.32%), Postives = 304/503 (60.44%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLF-------------------AMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQ-GLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            AS+FTFGRFLSGY WG  TD  GRKPVI++GL+SI IFS+ FG+S +Y+ A+++R ILGLTNGIM ALR SL+EVCGP+HV++GM Y++  R ISMV+GTG+GG+LAQPA+HYP+ FS TGLF                   + YPFLLPNLVGA  ++  + LVI YLPETKDY                                  +  + +                     G  + +  GAD +R  +    P                             S T A+D     ++G+EE+ G+FG  GLLA PHVK +L LGC+   L IGFDE YPL+ALSTP VGGLGWN +QIG+V+VM GL +A  QL+LLPP IK+VGIT +QR+G  VG  +F+A+P + S+ W+Y SLFS SV  N      L +++L +S+GSTTLVPSRMRGKLGGLYN AESLGRF GP G+A +YAWSVS S+  A   WV++ FV
Sbjct:   84 ASAFTFGRFLSGYAWGHVTDSAGRKPVIVLGLMSIIIFSLTFGLSTSYAWAVSSRLILGLTNGIMAALRVSLNEVCGPKHVLVGMNYLNSCRAISMVVGTGVGGVLAQPAVHYPSLFSATGLFGRWAKNPKRRRLRLMFFPRSRYPFLLPNLVGASCALVIMVLVIIYLPETKDY------------------------------ATIAAQRAFLQQQQXXXXXXXXXHTSDGVSNGCSEAMANGADNNRASRDEPPP----------------------------SSPTGASD---VDDKGEEEEIGIFGRHGLLATPHVKTLLTLGCVVMALQIGFDEAYPLFALSTPDVGGLGWNTLQIGKVLVMTGLFMACFQLLLLPPLIKVVGITKWQRVGFCVGALAFIAIPSVRSLSWNYPSLFSASVAVNTFASCGLAAVALTMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAISYAWSVSPSSSAAGVDWVNFRFV 525          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 2.920e-111
Identity = 204/425 (48.00%), Postives = 254/425 (59.76%), Query Frame = 1
Query:  193 MPALRTSLSEVCGPEHVVLGMTYISGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYN----KRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYG-ADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQ-GLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            M ALR SL+EVCGP+HV++GM Y++  R ISMV+GTG+GGLLAQPA+HYP+ FS TGLF  YPFLLPNLVGA  ++  + LVI YLPETKDY     KR F ++           S   S G S     G++T+    TN  E P                  P G +D+D                                                  E+G+EE+ G+FG  GLL  PHVK +L LGC+   L IGF+E YPL+ALSTP VGGLGWN  QIG+V+VM GL +A  QL+LLPP IK+VGIT +QR+G  VG  +F+A+P +  + W+Y SLFS SV AN      L +++LA+S+GSTTLVPSRMRGKLGGLYN AESLGRF GP G+A TYAWSVS S+  A   WV++ FV
Sbjct:    1 MAALRISLNEVCGPKHVLVGMNYLNSCRAISMVVGTGVGGLLAQPAVHYPSVFSATGLFGRYPFLLPNLVGASCALVIMVLVIIYLPETKDYATIAAKRAFLQEQQLQQEQQEHTSDGVSNGCSEAMANGTNTNR---TNRDEPPP---------------SSPTGTSDVD--------------------------------------------------EKGEEEEIGIFGRHGLLVTPHVKTLLTLGCVVQALQIGFEEAYPLFALSTPDVGGLGWNTFQIGKVLVMTGLFMACFQLLLLPPLIKVVGITNWQRVGFVVGALAFIAIPSVRLLSWNYPSLFSASVAANTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPSSSAAGFDWVNFRFV 357          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 3.230e-101
Identity = 196/490 (40.00%), Postives = 272/490 (55.51%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPE-HVVLGMTYISGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEE--TTDGSKSSTCATDELSAFE----QGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            A +FT GRFLSGY+WG  +D +GR+PVI++GL +  + S+ FG+S TY +AI++RF+LG+ NGI PA+RT++ EVCG   HVV  M YI G R  ++V G+ +GGLL QP  HYP+ FS TGLF  +PFLLPNLVG  +++  L  VI Y+PETKD+ K R SR                                        SP+ H                    + R    GG   Y+ L      GD S    A E     D    +      L A E       EEQGL GPGGLL+ P VK +LFL C+  +L  GF+EV+PL+ALST  VGGL W  ++IG+V+ ++G ++ + Q+ + P  IK++G   + R GC +G+ +FLA P      W++ +LF+  V +  +    L ++ +AL++ ST++VPSR+RGKL GLY TAES GRF   VG    +AWS+S+        WVD+ FV
Sbjct:   14 AGAFTLGRFLSGYLWGYVSDSVGRRPVILVGLSATAVLSLTFGLSTTYEVAISSRFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKDFEKTR-SRSXXXXX-----------------XXXXXXXXXXXXXXXXXSPARHRA------------------VARHPPQGGKLAYRSLED----GDVSAQQEAQETRGVNDSGGRAKHKEGGLHAREPPVTSNREEQGLCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSISSDNPD----WVDHRFV 459          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: A0A6H5JAX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX4_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 8.760e-87
Identity = 191/560 (34.11%), Postives = 271/560 (48.39%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTR--------------FILGLTNGIMPALRTSLSEVCGPE-HVVLGMTYI-------------------------------------------------SGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLF-------------AMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLAGDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            A +FT GR LSGY+WG  +D +GR+PVI++GL +  + S+ FG+S TY +AI++R              F+LG+ NGI PA+RT++ EVCG   HVV  M YI                                                 SG+R  ++V G+ +GGLLAQP  HYP+ FS TGLF             + +PFLLPNLVG   ++  L  VI Y+PETKD+ K R      R+   G                       +S+    + P     +      GR K    G D                 + P+  +                                E+QG  GPGGLL+ P VK +LFL C+  +L  GF+EV+PL+ALST  VGGL W  ++IG+V+ ++G ++ + Q+ + P  IK++G   + R GC +G+ +FLA P      W+Y +LF  SV +  ++  SL ++ +AL++ ST +V SR+RGKL GLY TAES GRF   VG A  +AWS+S+  L    GWVD+ FV
Sbjct:   14 AGAFTLGRLLSGYLWGYVSDSVGRRPVILVGLSATAVLSLTFGLSTTYELAISSRWVVATVGPGRSCGRFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGEAYPEKPKRVGASMGPQLVADVERSDCGKTAEILFLNVVHPPPAAFTSGSRAGTIVFGSAMGGLLAQPVDHYPSVFSATGLFGRFFSWTPHSHIPSRFPFLLPNLVGMGAALLLLPTVIAYVPETKDFEKNRSRSRFRRSLEHGD----------------------VSAQQGAQEP-----RGMNDSGGRAKHKEGGLDA---------------CEPPVTSNR-------------------------------EQQGHCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFVSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNYTTLFVASVASVTIVNCSLAAVGIALAVASTDIVSSRLRGKLSGLYGTAESFGRFASAVGSAVLFAWSISSDNL----GWVDHRFV 496          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: A0A6H5K449_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K449_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 6.160e-85
Identity = 135/209 (64.59%), Postives = 166/209 (79.43%), Query Frame = 1
Query:  823 DELSAFEQGDEEQGLFGPGGLLARPHVKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAGLLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDSLFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV 1449
            +E+S  ++GDE  G+ GP GLLA PHVK+VL L CI ST++IGFDEVYPL+ALSTP VGGLGW+ V+IG+V+VM G+L+A CQL L PP IK+VGIT +QRLGC +G+A+FLA+P +    W+++SL  +S  A+ L     G++ LALS+GSTTLVPS MRGKLGGL+NTAESLGRF GP GYA  YAWSVS STL AFGGWVDY FV
Sbjct:   33 EEVSVSKKGDE-LGILGPSGLLATPHVKMVLLLTCIISTVSIGFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLFLFPPLIKIVGITTWQRLGCRIGIATFLAIPAVNVFSWNFNSLVGVSRAADTLANCGCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDYRFV 240          
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Match: A0A6H5JEL7_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL7_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 3.270e-83
Identity = 143/191 (74.87%), Postives = 150/191 (78.53%), Query Frame = 1
Query:    1 ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGM-------------------------------TYISGTRTISMVIGTGIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYLPETKDYNKRR 480
            ASSFTFGRFLSGY WGSATD+IGRKPVIIIGLLSITIFS+IFGMSETY+MAI TRFILGLTNGIMPALRTSLSEVCGPEHVVLG                                +++SG   ISMVIGTGIGGLL QPALHYPT FSPTGLFA YPFLLPNLVGAVLS+FAL LVIFYLPETKDYNKRR
Sbjct:   18 ASSFTFGRFLSGYAWGSATDIIGRKPVIIIGLLSITIFSIIFGMSETYAMAIITRFILGLTNGIMPALRTSLSEVCGPEHVVLGKQRATITKDLLLSRLARSVVQNESHFPTQTLNSHVSGA--ISMVIGTGIGGLLVQPALHYPTLFSPTGLFARYPFLLPNLVGAVLSVFALVLVIFYLPETKDYNKRR 206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9381.30868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M0_ECTSI0.000e+094.62MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JH24_9PHAE5.530e-17985.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0L9_ECTSI8.000e-15952.80MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRQ3_9PHAE9.180e-14948.59MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K5T8_9PHAE9.900e-13847.32MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJX7_ECTSI2.920e-11148.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJK9_ECTSI3.230e-10140.00MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JAX4_9PHAE8.760e-8734.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K449_9PHAE6.160e-8564.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL7_9PHAE3.270e-8374.87MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9381contigEcto-sp8_S_contig9381:3..7261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score876.3
Seed ortholog evalue6.5e-252
Seed eggNOG ortholog2880.D7G0M0
Model size1449
Hectar predicted targeting categorysignal anchor
Exons9
EggNOG free text desc.major facilitator superfamily
EggNOG OGsKOG2615@1,KOG2615@2759
Cds size1449
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9381.30868.1prot_Ecto-sp8_S_contig9381.30868.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9381 3..7261 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145293.9286897-CDS-Ecto-sp8_S_contig9381:2..1971681145293.9286897-CDS-Ecto-sp8_S_contig9381:2..197Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 3..197 -
1681145293.940619-CDS-Ecto-sp8_S_contig9381:661..8831681145293.940619-CDS-Ecto-sp8_S_contig9381:661..883Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 662..883 -
1681145293.9507465-CDS-Ecto-sp8_S_contig9381:1621..17171681145293.9507465-CDS-Ecto-sp8_S_contig9381:1621..1717Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 1622..1717 -
1681145293.9598699-CDS-Ecto-sp8_S_contig9381:3116..35731681145293.9598699-CDS-Ecto-sp8_S_contig9381:3116..3573Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 3117..3573 -
1681145293.968992-CDS-Ecto-sp8_S_contig9381:4959..50641681145293.968992-CDS-Ecto-sp8_S_contig9381:4959..5064Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 4960..5064 -
1681145293.978055-CDS-Ecto-sp8_S_contig9381:5648..57541681145293.978055-CDS-Ecto-sp8_S_contig9381:5648..5754Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 5649..5754 -
1681145293.9872954-CDS-Ecto-sp8_S_contig9381:6085..61031681145293.9872954-CDS-Ecto-sp8_S_contig9381:6085..6103Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 6086..6103 -
1681145293.9967096-CDS-Ecto-sp8_S_contig9381:6492..65781681145293.9967096-CDS-Ecto-sp8_S_contig9381:6492..6578Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 6493..6578 -
1681145294.0064907-CDS-Ecto-sp8_S_contig9381:7097..72611681145294.0064907-CDS-Ecto-sp8_S_contig9381:7097..7261Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9381 7098..7261 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9381.30868.1

>prot_Ecto-sp8_S_contig9381.30868.1 ID=prot_Ecto-sp8_S_contig9381.30868.1|Name=mRNA_Ecto-sp8_S_contig9381.30868.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=483bp
ASSFTFGRFLSGYVWGSATDVIGRKPVIIIGLLSITIFSMIFGMSETYSM
AITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRTISMVIGT
GIGGLLAQPALHYPTFFSPTGLFAMYPFLLPNLVGAVLSIFALFLVIFYL
PETKDYNKRRFSRDSVRTASTGPRRSPSASPGRSSRKICGSSTSVISSTN
PTESPSLHLQQQQQQQQGRQKKLPYGADIDRQEKGGGAPLYQHLSQEPLA
GDASFPASAAEETTDGSKSSTCATDELSAFEQGDEEQGLFGPGGLLARPH
VKVVLFLGCINSTLAIGFDEVYPLYALSTPSVGGLGWNIVQIGQVMVMAG
LLLALCQLVLLPPFIKMVGITYYQRLGCGVGVASFLAVPGLTSIGWDYDS
LFSLSVVANNLIVGSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLG
RFCGPVGYATTYAWSVSTSTLQAFGGWVDYHFV
back to top

mRNA from alignment at Ecto-sp8_S_contig9381:3..7261-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9381.30868.1 ID=mRNA_Ecto-sp8_S_contig9381.30868.1|Name=mRNA_Ecto-sp8_S_contig9381.30868.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7259bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9381:3..7261- (Ectocarpus species8 EcLAC_412)
GCCAGCTCGTTCACGTTCGGCCGGTTCTTGAGCGGCTACGTTTGGGGGTC CGCGACGGACGTCATCGGAAGGAAACCGGTGATCATCATAGGCCTGCTAT CGATCACGATATTCTCCATGATCTTCGGGATGTCCGAGACCTACTCTATG GCCATCACAACGAGGTTCGCCTTGTTTCATCTGAAAATAGTTGTCGGGTT TGTCTTGGGTTGCTGCGGTAGTTGTGGAATATCGACGCGCCTGTTGTTGC TGGTGTTCCTTTCGCTACTGCCAACTGCAGCTTGTGCATGCGCAAATGCT TGCGGAATCGTGTAGACACCACGGGAATCGTGGCACGCTGAAAAGCTGTC CGGCCGTTCCTGCCCTCCGTGAAAAGCTCGCTATTCCCGTCAGAGAGGCC CTTGACATGCTTGCGGAACACATGAGCCGTTAGGGCAAGTAATGGCACGT TTCTTGTCGCAAGCGCTACCGTGCTCGCCAACAACGCACACCGGGTGGTC AGGGAACGCCCCCGTTCTTCTCCCAGCAAAAGGGTGGGACCCCCCCCCCC CCCCCCCCCCCCCCCCCCTTCACAGCTCTTCCTATATCTATACCTTTTCC GGCACCACCTTTCTGTTAGAGGTCGTATGCATAGCTGTTTTTTTGCCCGA CTTGCTGGTGGTTCATGCTGATCCTGCATGCAGGTTTATCCTCGGACTGA CTAACGGCATCATGCCGGCTCTTCGGACATCATTGAGCGAGGTCTGCGGG CCCGAGCACGTCGTTCTAGGCAAGCAGCGTGCTACTTTTACTGGGGATGT CCTGCTTGCGCGCCCTGCAAGAAGCGTCGTCCAGAACGATAGCCAATTCT CACGTGTCGGGGTTTTATTTGCCGTTGTATAACTTGTGATTCGAGCATAT TCTGTTGCAGTTTTTTTTTCGTTTTTTCCCTGCACACACCAACGCTCTCC TCTTGTTTCTCCATCCTGGAGGACACCTGTTGATGTGCGTTTTCCTAATT TTTCGACTTTAACGATGGTTTGATGTGGAACCTACATGTCTTGGCGAGTT GTTCGCACGTACGCTTATACGTGGCCCCTCTTCAGTCGCCACTGTCTAAC GACGTCCCTTGTTTTCGGCTTCCGTTTTCCGCCCATCGGTCCCGACGCGC CCATCTAGGGATGACGTACATCAGCGGTGAGTACATGGTTTAGTGTAGTG TGTTCGTACGTGTGTGCATGTTGGTCAAGATCTTTTCATGTTGTTTTCCC AGACGTTAACTATGTCCACGTCCTGATGCTACGACTCTGGTTGTTCACGA TTGTGTTCGTTTTGTCCATGTAGTTCTTCGGTAGTACTCTCGTTTTCATG CGTGGGGAGGTTCCTACTTTGAAATCCGTAGTCTGCATTCGTGTTTGTAT TCCCGCTTCGGTCGATCGAAACGACGCCGGTTTTGCCGGGACTCAGTTGA TATACGCATACCTTCTCTTCCGGTCTGACGATGTTCCTCGCGTACTAATC ACTACAGGTACTAGGACCATCAGCATGGTGATCGGCACGGGAATCGGCGG TCTACTGGCACAACCAGCGCTCCACTACCCGACCTTTTTCTCGCCCACAG GCCTTTTCGCCATGTGAGCGTTGTTAGCAAGCAGAGGGTTCCAACCCGCC CCGAGCACCCGTCAAACTTACCAGCTCACTAGAGTGTGATGGTCTTTCCC CCCCCCCTCTCAAGGGTAGCATGAATATTGAATGCCGCCTGTGAACCCCC TTTCGGACTCTGTTCTGTTCAGCACTCTTTGCTTCAAGTTGTTGTGGTCC GCCTCCCCAAACCGATGCTTGCCGTGCCCCGAAAGTTGACCCAATTTCTT GCGAAACCCCCCTAACTAACGCAGATCCGACTGAACGATAGAAACGGTCC GGTTTTCGCCTTACAACATTCGATCGGAGGCGAGGCTCTGTGTTCTAGGT GCATTTGTTATTTCGAGGATGACGCGCTGAGCGTGTTCCTTTTCCTTCCC GGCAACTAAGTAGTAGGACCGGTGGCTGCCGCTTCCTGCCGCTGTTCACA AACCAGTGAGACGAAACACTGGCTTTGCACGTGTGCGCTGTCGAAGCTCT AAGTGACGATGGTTCCGCTCCCAATGGGCGATCGATGTGGCCTCCGGGGA AACCGAGTCGAAGTGCAAACCTCGATATTCCCGCACTGTTACGAAAGGTA CCCGTTCCTGCTCCCGAACCTGGTGGGGGCTGTGCTGTCGATCTTCGCCC TCTTCCTCGTGATTTTTTACCTCCCGGAGACCAAAGACTACAACAAGCGC AGGTGAAGCCGGTTAAAACAAGCCCGTTCGCATCAAGAGGAAAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAG AAAAGAGAGAGAGGTGGACTGAGTGATAGACTGAAAGAGATGGACTGAGG GATACAACTATTGATATGATACGTGGGCCGAGGGAGACAGAAAGAAGGAC AGAGTGATAGATTGACTGATAGTTATACTTGATCAGATACGTGGGTTGAG GGAGACAGAAAGAAGATACGATATCGGCACAACAACCCGGGTCCTTTGGG GCCGTCCCACTGCAAGATTCCGGTACGAGGTACGCTTTGCGAGTTAAGGC CATCGTTGATACAATAGGTGGTTTGCAACAACCCCATGACGGCATTTCTG TCATCCGTCCCGTTAGGAACGATTCCTGGGATAACGGCACGCGGCAGGTG GGATTGGTCTTTTCACCAAGATGGATGCACAAGGTGCTGAGATGACGTGA CTATCTGATAACAGGAAGCGCATTATTTACGGAGACGCAGCACCTCCGTA GGTGTCCAGTTCGTGCACACGTTTTCGTACAAAGTTTGTCGTGTGTGCAG CTGTGTGTACTCACTTTTCTATCGGAAGCCTCTTTTGAGGTAGAGGCCGT TGGTTCGATTCGATGTACCGGGAATACTCTTCACAATGACTGAACAAAGC TCTCTGCAAGACATGTTGAGCGACCCGAACCTGGAGCAAAACATACAGAT TGGCACTACAACATTATCCCGTGGTTGGCTTCCCGGCTCTCTAGTTTCCC ATTTGGTTATTTCGCTATTTCCAACGCGAAGATCGGAGCTTTCTCAAATT CGTCTCGTGCCTCGTGGCGGACGCATTCTGACAGTTCCGCCGCCCCGGAA CCCCGGCCCAATCTATACCACCTCGCCAACCGGATGTACGCCAACCCAGT AAACTGACGTACGCTCCAGTCTTACCCAAATCCTTGTGCGGCGGAAACAC AATCTGTCGCTTGCCTGTGAGCGCCTCGGAGTTGGAGCGGTAGGGCGTAC CACTTTTGGGAGCGTAGAATTTGCAACCTTCTTTCGGAAGTTGTCCGATT GCCGTGGAAAGTTAAGCTTTTTGGAAAGCTTGCACTTGTTCCACGCGAAA ACTGGTAGAACCCGGTTTCAGTCGGCGTTCGCGGCTGCGGTGAAAGATCT GCCATAAGCTCCCCATGGAAAATCTTTGCGTGAGAGTCCACGTGAGGCGT CGCGGAAGTATAGTGGGAGTCCTCCGCTGAAAAGAGGAAGTGCCAGGTCA TGCGATAATATTAAGGTCGTATCGTACTTCAGTAATAATGTGTTTTTGTT TTGCCTGCAAACCGTGCGATTCTGTATCGTGATTTCAGGTTCAGCAGAGA CTCGGTGCGGACTGCCAGCACCGGTCCCCGACGGTCTCCCTCTGCAAGCC CGGGACGAAGCAGCAGAAAAATTTGCGGCTCCTCCACAAGTGTCATCAGT TCAACGAATCCCACTGAATCGCCGAGCTTACACTTGCAACAGCAGCAGCA ACAACAACAGGGGAGGCAGAAGAAGCTGCCATATGGTGCTGACATCGACC GGCAGGAGAAAGGAGGAGGGGCGCCGTTGTACCAGCATCTCAGCCAGGAA CCCCTCGCTGGTGACGCCTCCTTCCCTGCCTCCGCAGCCGAGGAGACAAC GGACGGCAGCAAGAGCAGCACTTGCGCTACCGACGAGCTGTCGGCCTTCG AGCAAGGAGACGAAGAGCAGGGCCTCTTCGGGCCGGGAGGCCTGCTGGCT AGACCGCACGTCAAGGTTGTCTTGTTCCTCGGATGCATAAACTCGGTGAG TGTGGTGTTGGAGGGGATAAGAGTAGGCTTGACTTCTTCGGCAAGGTGTG AGGCATATATGTAGCCGCAAGACTAAACGCTGTGCCTCTCGCGTCCTTCT GTTCGCCTGCTGGGAAAGCTAGCATTTCGAAACGATGTCGTAGTAATCGC CCGGAAAAAGTGCCTTGTTGCGGTTCCTTCGTTTGGACGCGCGGTCGCCG CGTGTTTTCTTAAAACAACACCTGCCAGATATTGGGACAAACGGATAATG AAGCCAGCCCCCCCCCCTCCGCCCATCGTGGGTTTTCGTCGCAACATCGT TGTAAAAACGCCGATCGCTTCGTGAGCTCGACAACCATATTTACCGTTTT TTTAACCTCCGTTTTTTGTTTTTGCGGTAACATTAATAGTGGTTGAGTAG AGCATGTTGAGCGGGGTCGAGAACCTTCATCCGCGTAAAGGTGATGATCG CACCACGTTGGGTTCAATTGGTCAAGCACCCTCGACGCAGTCACACAGTG CTTGTAACTGTCTCTGGAAGTGAAAAGCACCAGAAAACAAATTAAGCCAT TCCATCCGTATGCAAGGAAGTAAGCACGAGATGCCGAACACCCTTAGCAG GATGCAGCGCACCCTCCATGCGACTCGCCGAATACCTCACAGCGCTTGGC GCTTGGTGATGTGCTAGCCTGGTCCGGTGAAACCCGGTCGACTTTGTAGG GATGCGAGGTCAATGGTCTCACGGCCACGACATAACGGTTGTGAGGGCAC CCCCTCTACTACATGTTCTAGCGCGTCCTGCATGGCGAATTATGTGAGGT TGTGAGGATTTTCTGTTTCAGAAAAAATTGCTGGGATTGAACAAGCGAAA CTATGGTCGCCTTCTTTGGAGACTTCCTGCTGTATTTCCTTTTTCACAAA AGTGATCGTTTTTCTTGCAAGAACACGATACTGATGTACATGCTACAAGT ACATGTTTACCTCTTTGGTAGTTCACTTGACCTTTCAGGCTGCGAGCTAT TCATGGCGAACCCAGCAACACATCCCGAACCAGCAACTTTTGTGCATATG ATACGCCCCTTTGCTGTCGTGTGTGCATTCGGATTGCCCAGATGCTGAAA AATTATTTAACTACTGAATCAACCTACGCTTTGTCACGTTGTGACCGCGC ACACACAAAGATATTGGCATCTTCGCTTGGCTGATCTCGAGCAGCCAAAA AAATGGCGAGGAACAAAAATGCGACCAAGAAACGAAATACCTAAATAGCG GGAGGTACCAGCTCTCCAAATGAAAGTGCTCCTTTGGCTCTACGATCCTG AATGTCCTGTCGTGCCCTCCTCCTGTTCCCCGCGTTTCATGTGCATCCGA TCTAATCGCACCCAACTCAACACGTCGAATGCTGTCTACATCAGACCCTG GCGATCGGGTTCGACGAGGTGTACCCTCTGTACGCGCTAAGTACTCCCAG CGTCGGAGGACTTGGCTGGAACATAGTGCAGATTGGACAGGTGATAACAG GTCTGGGAGACTGTTGCGTGTGTGGCCGGCTCAGCAAGCACCGCGTGACC TTAGCGAACTGTCACCGCGAGTGTTTGTGATGTGGGTGCGGACACCCGCC GGCTTGGACGCTGGTTGCTTGTTGTGTGAAAGACGTTCCTGAAGTGAGTT TTTCGGCTCATACGCTTCGTTGGGTCCAGGCACGATCACACCTAGTAATG ACGAGGCGAAGAAAGCAGTGAAGTAGACAGACGGCAGGTGCCCGCCCGCG ACAGTGGTTGCGGTGCAGTCAAAGGCCGACCAAGCCGGTCGGCAAAGCTT GAACGGAATGGCATTTTTCGATCCAAACCCGATTCTTGCGTGTTGTGCGT GGGCATCGGCTATCGTGAGTCATCACAGGCACGCGGGTGGATTTGTGTTA GCCGCTTGTTTAGTTCCAAGAACGAAGATTTCAATGGGCCCAAGCGCAAG CTCTCTGCCTTGCAGGAGACGGCGCAACAAAAATAGGGCGTTCAAACGTT TTTGGTGCTGGTTTACAACTTGATTGAAATCGCTTTGCATTCGCAATGAC ACTAATTGATTGTGTTGTTGCTCGACAAGCGACAATTACAAATACTCTTT CGCAGGTTTGCACCACTCATTTCAACGAACTGGCAGGTTTTGAAACCCAA ATACGTCGTTCTCGTGCCCCGGCCCAAGCTTTGCAAGATTGGCAATCTAC CCGCACGGCGTTTGCCCGGCACGTCCAGGTGATGGTTATGGCAGGCTTGC TGTTGGCACTTTGCCAGCTCGTGTTGTTGCCCCCCTTCATCAAGATGGTC GGCATCACATACTATCAGCGTCTTGGCTGCGGAGTGGGTGTCGCCTCCTT CCTGGCCGTCCCAGGGCTTACGTCAATCGGCTGGGACTACGATTCTCTTT TCTCTCTGTCGGTGGTCGCCAACAATTTGATCGTGGGCAGTCTCGGGTCG GTGAGTGAAACTCAGGGAGAGCACATGGGTGGGTCCCTACCCAGCGTAAC ACAAGCAATTTAGGAATTCGTGTTTATTCACAGGGATTCGTCCACTTGAA GCCACCGTTTCGAGTTGATGATGCAGTAGAGCCTACTCCCTTGCTATGTA TCTGCCATGCTTGACACCCGAAATCCACGGATTTATCCGGTTGTCGGATT ATGCCGTGAAAACAGCAGTGCATCCATGGCAGTTGACCTCCATGACGCAG CTCCGGCTGTCTTCGACTGATCGCGATCCTGTGGGCCCTCGGCGAACTCG ACTTACGGATACGATAGCACTCGAGGATCGAAGGACTTTGAGCGATCCAG CCTTTTCGATTCCTTGGCACACCCACAGCAGCAGTGGAAAGTAGAGTTAA TGGCCGGCACCCGAAATTGAGCAGCACGATTCTTTTTGTTCGAACCAACA CGAAATTGGAACAGATTTCGCTGGCACTGTCGCTCGGGTCTACCACCCTG GTTCCATCCAGAATGCGAGGGAAGCTGGGCGGGCTTTACAACACTGCGGA GAGCCTCGGCCGTTTCTGTGGCCCAGTCGGCTACGCCACCACGTACGCCT GGTCTGTGTCGACTTCCACCCTCCAAGCCTTCGGCGGCTGGGTCGACTAC CACTTCGTA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9381:3..7261-

>mRNA_Ecto-sp8_S_contig9381.30868.1 ID=mRNA_Ecto-sp8_S_contig9381.30868.1|Name=mRNA_Ecto-sp8_S_contig9381.30868.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1449bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9381:3..7261- (Ectocarpus species8 EcLAC_412)
GCCAGCTCGTTCACGTTCGGCCGGTTCTTGAGCGGCTACGTTTGGGGGTC
CGCGACGGACGTCATCGGAAGGAAACCGGTGATCATCATAGGCCTGCTAT
CGATCACGATATTCTCCATGATCTTCGGGATGTCCGAGACCTACTCTATG
GCCATCACAACGAGGTTTATCCTCGGACTGACTAACGGCATCATGCCGGC
TCTTCGGACATCATTGAGCGAGGTCTGCGGGCCCGAGCACGTCGTTCTAG
GGATGACGTACATCAGCGGTACTAGGACCATCAGCATGGTGATCGGCACG
GGAATCGGCGGTCTACTGGCACAACCAGCGCTCCACTACCCGACCTTTTT
CTCGCCCACAGGCCTTTTCGCCATGTACCCGTTCCTGCTCCCGAACCTGG
TGGGGGCTGTGCTGTCGATCTTCGCCCTCTTCCTCGTGATTTTTTACCTC
CCGGAGACCAAAGACTACAACAAGCGCAGGTTCAGCAGAGACTCGGTGCG
GACTGCCAGCACCGGTCCCCGACGGTCTCCCTCTGCAAGCCCGGGACGAA
GCAGCAGAAAAATTTGCGGCTCCTCCACAAGTGTCATCAGTTCAACGAAT
CCCACTGAATCGCCGAGCTTACACTTGCAACAGCAGCAGCAACAACAACA
GGGGAGGCAGAAGAAGCTGCCATATGGTGCTGACATCGACCGGCAGGAGA
AAGGAGGAGGGGCGCCGTTGTACCAGCATCTCAGCCAGGAACCCCTCGCT
GGTGACGCCTCCTTCCCTGCCTCCGCAGCCGAGGAGACAACGGACGGCAG
CAAGAGCAGCACTTGCGCTACCGACGAGCTGTCGGCCTTCGAGCAAGGAG
ACGAAGAGCAGGGCCTCTTCGGGCCGGGAGGCCTGCTGGCTAGACCGCAC
GTCAAGGTTGTCTTGTTCCTCGGATGCATAAACTCGACCCTGGCGATCGG
GTTCGACGAGGTGTACCCTCTGTACGCGCTAAGTACTCCCAGCGTCGGAG
GACTTGGCTGGAACATAGTGCAGATTGGACAGGTGATGGTTATGGCAGGC
TTGCTGTTGGCACTTTGCCAGCTCGTGTTGTTGCCCCCCTTCATCAAGAT
GGTCGGCATCACATACTATCAGCGTCTTGGCTGCGGAGTGGGTGTCGCCT
CCTTCCTGGCCGTCCCAGGGCTTACGTCAATCGGCTGGGACTACGATTCT
CTTTTCTCTCTGTCGGTGGTCGCCAACAATTTGATCGTGGGCAGTCTCGG
GTCGATTTCGCTGGCACTGTCGCTCGGGTCTACCACCCTGGTTCCATCCA
GAATGCGAGGGAAGCTGGGCGGGCTTTACAACACTGCGGAGAGCCTCGGC
CGTTTCTGTGGCCCAGTCGGCTACGCCACCACGTACGCCTGGTCTGTGTC
GACTTCCACCCTCCAAGCCTTCGGCGGCTGGGTCGACTACCACTTCGTA
back to top