mRNA_Ecto-sp8_S_contig9378.30863.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9378.30863.1
Unique NamemRNA_Ecto-sp8_S_contig9378.30863.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A6H5L954_9PHAE (UVR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 678 bits (1749), Expect = 2.250e-237
Identity = 440/558 (78.85%), Postives = 446/558 (79.93%), Query Frame = 1 
Query:    1 MNTPMRARRRGGRRVAGLCRCVALAAVAARTQALVTCGSTATAWSPSCXXXXXXXXXXXXXXXAVMRDPSSHGRVGRTGARSSWGQRASSQSSRPTAARVSTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVWAVQDEEDWEFEEEVQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPQDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSXXXXXSERRSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLKD-------GLEGMPRIINLSEQGGGFXXXXXXXKDNRLEEMLEAXXXXXXXXXXXXXGGTGAGRAPSGGMVIIGGGDD 1653
            MNTPMRARRRGGRRVAG+CRCVALAAV ARTQAL+TCGSTATAWSPSC          XXXXXAVM DPS HGRV RTG RSSWGQRASSQSSRPTAARVSTSL   XXXXXXXXXXXXXXXXXXXXXXXXXXX     GVWAVQDEEDWEFEEEVQRLEERLENAVKNEDYKGATKCRD+LYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAV RSWRSLFRSGDGRFSSSVIK                CNEEVTSRQNA                                              SFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTP+DRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLS     SERRSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPP GKSGSSRRVAMGIDGLKD        LEGMPRIINLS+QGGGFXXXXXXX           XXXXXXXXXXXXXGGTGAGR PSGGM+IIGGGDD
Sbjct:    1 MNTPMRARRRGGRRVAGVCRCVALAAVTARTQALLTCGSTATAWSPSCSGSERSAITTXXXXXAVMHDPSPHGRVRRTGGRSSWGQRASSQSSRPTAARVSTSLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GVWAVQDEEDWEFEEEVQRLEERLENAVKNEDYKGATKCRDELYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVDRSWRSLFRSGDGRFSSSVIK----------------CNEEVTSRQNAAAAAAATDPTLRSFSPAPSALSSFGSSSKAADDDGSS---------SFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSGGRGGSERRSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPMGKSGSSRRVAMGIDGLKDVRAGAVVALEGMPRIINLSDQGGGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGAGRTPSGGMIIIGGGDD 528
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: D7G2P0_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 1.310e-168
Identity = 330/341 (96.77%), Postives = 334/341 (97.95%), Query Frame = 1 
Query:  622 DADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPQDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSXXXXXSERRSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLKDGLEGMPRIINLSEQGGGFXXXXXXXKDNRLEEMLEAXXXXXXXXXXXXXGGTGAGRAPSGGMVIIGG 1644
            DADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXX FGD+PKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTP+DRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSXXXXXSERRSK+KPRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLKDGLEGMPRIINLSEQGGGFXXXXXXXKDNRLEEMLEA XXXXXXXXXXXXGGTGAGR PSGGM+IIGG
Sbjct:    8 DADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAXXXXXXXXXXXXXXXXXXXRSFSXXXXXXXXXXXXXXXXXXXXXXXXFGDDPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSXXXXXSERRSKIKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLKDGLEGMPRIINLSEQGGGFXXXXXXXKDNRLEEMLEALXXXXXXXXXXXXGGTGAGRTPSGGMIIIGG 348
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A836CFM1_9STRA (SnoaL-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM1_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.040e-37
Identity = 71/135 (52.59%), Postives = 101/135 (74.81%), Query Frame = 1 
Query:  442 EDWEFEEEVQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTS 846
            E+W+ E +V +LE  L  AVK E Y  A++ RD L R+HMD+ SAVL+ N+ FY+AF+ K+AD+MASLW+ S+ V+C+HPG EP++G +AV ++WR +F SGD  F SSV++P  VR+ VRGT+A V C EEV++
Sbjct:    9 EEWDVETKVAKLESSLSRAVKEERYAEASELRDALSRMHMDDYSAVLAANADFYSAFSKKNADKMASLWLASDAVLCVHPGQEPLVGHEAVTKAWRGMFASGDAAFKSSVVQPKGVRVSVRGTSAWVTCTEEVSA 143
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A7S0UAM3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAM3_HEMAN)

HSP 1 Score: 127 bits (319), Expect = 7.660e-29
Identity = 59/127 (46.46%), Postives = 89/127 (70.08%), Query Frame = 1 
Query:  466 VQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTS 846
            V++LE  LE+A++ E +K A+  RD+L R+HMDE+SAVL TNS FYAAF+ KD D M  +W+ S  V CIHPG +P++G   +   W ++F++ D  F S+ I+P  +++ VRGT+A V C E+V++
Sbjct:  104 VEKLETSLESAIQQEYFKDASTIRDELSRMHMDESSAVLRTNSDFYAAFSTKDIDLMGKVWLNSPQVQCIHPGAKPLVGYDKILSMWTNMFQAKDKVFRSTDIRPDGIKVHVRGTSAYVMCCEQVSA 230
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: L1K3M9_GUITC (UVR domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1K3M9_GUITC)

HSP 1 Score: 127 bits (318), Expect = 6.790e-28
Identity = 59/118 (50.00%), Postives = 83/118 (70.34%), Query Frame = 1 
Query:  493 NAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTS 846
            +AVKNE Y  A+  RD+L R+HMD+TSAVL TNS FY AF+ K+ + M ++W  S  V CIHPG +P+LG   +   WR++F++ D  F S+ I P++V++ VRGT+A V C EEV+S
Sbjct:  122 SAVKNERYSEASTLRDELSRMHMDDTSAVLKTNSDFYNAFSTKNIELMGTVWHNSPHVQCIHPGAKPLLGYDNIVNMWRNMFQARDKAFKSTAITPSNVKVHVRGTSAFVTCTEEVSS 239
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A7S2SU46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU46_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.050e-23
Identity = 48/101 (47.52%), Postives = 72/101 (71.29%), Query Frame = 1 
Query:  541 DLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVT 843
            +L+R+ MD+ SA+LS N AFY AF+ KD   M  LW+ S    CIHPG EP+LG +++  +W ++ RS D RF +++IKPT+V++ V+G+TA + C EEV+
Sbjct:   57 ELFRLQMDDGSAILSANQAFYTAFSDKDMQSMRDLWLDSPQTCCIHPGQEPLLGHRSIMNTWDAMLRSQDTRFRNNMIKPTNVQLSVKGSTAWISCVEEVS 157
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A7S0YXZ8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YXZ8_9CRYP)

HSP 1 Score: 106 bits (265), Expect = 5.920e-23
Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 1 
Query:  466 VQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEE 837
            V++LE+ L+ A+K E +K A   R +L R+H D++SAVLS N+ FY A + ++   MA +W   + V CIHPG  PV+G + V   + ++FR+     +++ ++PT VR+ VRGT+A V C EE
Sbjct:    7 VEKLEKSLDAAIKKEHFKDAQTLRKELSRLHGDDSSAVLSANADFYVALSTRNTTLMAEVWDDCDTVQCIHPGLRPVVGHRQVVDMFDNMFRTKQAAAANTRVRPTKVRVHVRGTSAFVLCTEE 130
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A7S4MBM1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBM1_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.960e-21
Identity = 56/141 (39.72%), Postives = 87/141 (61.70%), Query Frame = 1 
Query:  436 DEEDWEFEEEVQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGR--FSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQ 852
            D  + E E +  RLE  +  A +  ++  A   RD+L R ++D+  AVL  N  FY AF+AKD   M+ LW+    V+C+HP   P++G  AV  SWR +F +G+G   F  +V++P+ VR+ +RG+TAI+ C+EEV +R+
Sbjct:  205 DSSEAELEAKSGRLEAEIYEAAEGGEWDVAQAKRDELSREYLDDCGAVLQANLRFYRAFSAKDYGEMSKLWLHDASVLCVHPSHAPLVGASAVLGSWRRMFDTGEGAPAFRRNVVEPSRVRLSMRGSTAILTCDEEVYTRR 345
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A7S0TUZ2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TUZ2_HEMAN)

HSP 1 Score: 107 bits (268), Expect = 3.770e-21
Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = 1 
Query:  466 VQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEE 837
            V +L++ L+ A+K E +K A   R +L R+H+D++S+VLS NS FY A + ++   M  +W   + V CIHPG  P++G + +   W  +FRS +   +++ ++PT V + VRGT+A V C EE
Sbjct:  148 VGKLDQSLDAAIKQEHFKDAETLRSELSRLHIDDSSSVLSANSNFYLALSTRNTTLMREVWDDCDTVQCIHPGSRPIVGYKQILEMWEEMFRSKEAATTNTRVRPTKVCVHVRGTSAFVLCTEE 271
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BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Match: A0A7S3VB37_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB37_9STRA)

HSP 1 Score: 107 bits (266), Expect = 7.700e-21
Identity = 50/132 (37.88%), Postives = 84/132 (63.64%), Query Frame = 1 
Query:  457 EEEVQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAFYAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGDGRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQ 852
            EE+V  +E  + NAV   DY+ A   + ++ ++H+D+   VL  NSAFY AF+ KD + M +LW+     +CIHP    ++G + V  S++ +F  G+  F  + ++P+++R+ V+GTTAIV C+EEV +R+
Sbjct:  133 EEKVHEIETEMYNAVDAGDYEQAHAKKSEINQMHIDDCCNVLQANSAFYRAFSNKDYEAMENLWLHDASALCIHPSSTTIIGSKNVLSSFKEMFAGGNVAFQKNKMEPSNIRMSVKGTTAIVTCDEEVYTRR 264
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9378.30863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L954_9PHAE2.250e-23778.85UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P0_ECTSI1.310e-16896.77SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CFM1_9STRA1.040e-3752.59SnoaL-like domain-containing protein n=1 Tax=Tribo... [more]
A0A7S0UAM3_HEMAN7.660e-2946.46Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
L1K3M9_GUITC6.790e-2850.00UVR domain-containing protein n=2 Tax=Geminigerace... [more]
A0A7S2SU46_9STRA5.050e-2347.52Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0YXZ8_9CRYP5.920e-2341.13Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4MBM1_9STRA2.960e-2139.72Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0TUZ2_HEMAN3.770e-2138.71Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S3VB37_9STRA7.700e-2137.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9378contigEcto-sp8_S_contig9378:119..6491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score127.9
Seed ortholog evalue1.5e-26
Seed eggNOG ortholog55529.EKX55187
Model size1656
Hectar predicted targeting categorychloroplast
Exons7
EggNOG free text desc.SnoaL-like domain
EggNOG OGs2CMBB@1,2QPVH@2759
Cds size1656
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9378.30863.1prot_Ecto-sp8_S_contig9378.30863.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9378 119..6491 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145293.4391406-CDS-Ecto-sp8_S_contig9378:118..1641681145293.4391406-CDS-Ecto-sp8_S_contig9378:118..164Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 119..164 -
1681145293.453438-CDS-Ecto-sp8_S_contig9378:1035..12021681145293.453438-CDS-Ecto-sp8_S_contig9378:1035..1202Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 1036..1202 -
1681145293.467311-CDS-Ecto-sp8_S_contig9378:1473..15671681145293.467311-CDS-Ecto-sp8_S_contig9378:1473..1567Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 1474..1567 -
1681145293.4777892-CDS-Ecto-sp8_S_contig9378:2259..28311681145293.4777892-CDS-Ecto-sp8_S_contig9378:2259..2831Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 2260..2831 -
1681145293.4900017-CDS-Ecto-sp8_S_contig9378:3243..33991681145293.4900017-CDS-Ecto-sp8_S_contig9378:3243..3399Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 3244..3399 -
1681145293.5043468-CDS-Ecto-sp8_S_contig9378:5187..52571681145293.5043468-CDS-Ecto-sp8_S_contig9378:5187..5257Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 5188..5257 -
1681145293.5161927-CDS-Ecto-sp8_S_contig9378:5940..64911681145293.5161927-CDS-Ecto-sp8_S_contig9378:5940..6491Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9378 5941..6491 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9378.30863.1

>prot_Ecto-sp8_S_contig9378.30863.1 ID=prot_Ecto-sp8_S_contig9378.30863.1|Name=mRNA_Ecto-sp8_S_contig9378.30863.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=552bp
MNTPMRARRRGGRRVAGLCRCVALAAVAARTQALVTCGSTATAWSPSCSG
SGRSTITTTTTTTAVMRDPSSHGRVGRTGARSSWGQRASSQSSRPTAARV
STSLSAASGSSSSSSSSGINAGDGDSGEGDGGGGGIGVGGVWAVQDEEDW
EFEEEVQRLEERLENAVKNEDYKGATKCRDDLYRIHMDETSAVLSTNSAF
YAAFTAKDADRMASLWMPSNDVMCIHPGDEPVLGQQAVARSWRSLFRSGD
GRFSSSVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAAAAAAAAATAAAAA
TDPTLRSFSSAPPSALSSFGSSSKADDDDDSSSFGDNPKHKDPAAWLAHV
ISENPYEPGSEKSIVSNPTTPQDRARIKKAVGKHGAASIKKAVAAAFAQS
DEETRLANLAKRSKKGGAFLSGGGGGSERRSKVKPRVLNVTNIYRKAGGK
WLMVHHHASLPPTGKSGSSRRVAMGIDGLKDGLEGMPRIINLSEQGGGFG
GGGGSSKDNRLEEMLEALRNRLPGGLPGGIGGTGAGRAPSGGMVIIGGGD
DD
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mRNA from alignment at Ecto-sp8_S_contig9378:119..6491-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9378.30863.1 ID=mRNA_Ecto-sp8_S_contig9378.30863.1|Name=mRNA_Ecto-sp8_S_contig9378.30863.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6373bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9378:119..6491- (Ectocarpus species8 EcLAC_412)
ATGAACACGCCGATGAGGGCCAGGAGAAGAGGAGGGCGCCGCGTGGCCGG
CCTCTGCCGCTGCGTCGCCCTCGCGGCAGTCGCTGCAAGAACGCAGGCCC
TCGTCACGTGCGGCAGCACTGCTACTGCATGGTCGCCGTCTTGCAGTGGC
AGCGGGAGGTCAACCATCACCACCACCACCACCACCACCGCGGTGATGCG
TGACCCCTCGTCGCACGGCCGGGTGGGCAGAACAGGCGCCCGCAGCAGCT
GGGGACAACGAGCAAGCAGCCAGAGTTCGAGACCAACAGCAGCAAGGGTA
TCGACCTCCCTGTCGGCGGCGTCTGGTAGCAGCAGCAGCAGCAGCAGCAG
CGGGATCAATGCCGGCGACGGAGACTCCGGCGAGGGCGACGGCGGCGGCG
GCGGCATCGGTGTCGGGGGAGTGTGGGCCGTGCAGGACGAGGAGGACTGG
GAGTTCGAGGAGGAGGTCCAGCGGCTCGAGGAGAGGCTGGAGAACGCCGT
CAAGAACGAGGACTACAAGGGGGCCACCAAGTGCAGGGACGACCTCTACA
GGTGTGATATGTATACGGTAGAATACGTCTCTCCTGCTAAGATAGCATTT
ACCGCTCCAACCTCTTCATCAATGCGTGCATACAGGAAGGGCCCGTGTGT
GTTTCCTTTGGCAAGGCCGGTCGCGATGAGGGGCTGGCCGATGAAACGAG
CCTCCGTCTTAGTAGGACATATCCCGCAAGAACGATGTTCGTGTGTGTGG
TATCATGCGTCTATCGTGACATGCGTCTATCGTGACCTTTCAGAGGGTGC
TGCTCGCATTTCCACAGCAGTGCTGACCGGCTTGATCTGGCAAGGGTAGG
ACCGTGTCTTGCGTGCACCTGGTCTTGGTTACCTACCCTCTACGCATACG
TTGCCGCCGGAACACACAACACGCGGGATTTTATATATACTATGGTAGGA
AGTGACCCGCGCCAGGGTGTAGACTCGCGTCTGAACAGCATGGCACGTGG
TCTGCCTTGTCGCAGTGGTTTCCCAGGGGAGACCCTATCGCAAAAATTTG
GGATGTAGGATGGCCCCGGCACGCTCGCCTGTATGATGTCGGTTACACAT
GGCATCGTAGCCGCTGGACGACGTACACCCACAGTGGCCCAAGGGCCACC
ATTGCCGTTGTTTTTTCTTCTCAGTTGACACAATAACGCCGCGTCTCCCG
CTTGCCCTTCCCTGTGTGTTCTGGTTTTGTTCAGGATTCACATGGACGAG
ACGTCCGCCGTCCTGTCCACCAACTCGGCGTTCTACGCAGCTTTCACGGC
AAAGGTATGACATACTCCGTATATGGCAGGCACGGCTATGTGCGGCATGG
TCGTCGGTGGGCTGGAAAACGCTTGAAAATATGCAAAGTGTGAATTCATG
AGCGTACCTTTACCTGCCAAATGTGTTTGGAGAGAGGCGCACGCTCATTC
AGAGCTTTTGCGTTCTCGAGAGCTTTTGCGTTCTCGCGTGTGCGAAGAAA
GACACAAAGGTTTCGGTAATCGCGCGTTTCGAAGTAGGGCCCGACTCCGT
CGGAATAGCGGTGTTTTAGTTTTACTTGAGGACGGCAGCACCGGTAGAAC
ATGTTGTCTGGCAGGGCTACAATAGAGGGAGTTTACACACAAATTTGATG
GGGGGCACGCATACACCATGGCATGGCTGACGCCCCTCCCTCCCCTACCT
GGGCCCTTAGCACCGTTGATGAAGTTTGACACAGAGCTCCCCAGTCCCTT
TTTATGAGCATGAGTGACCCTGCAATCGGCCTGCTAGCTCCCCTCCGACG
GACTCATCAAATTTCCATGGAGCCAGCCACGCGCCCGCGACAGACACCTG
AGCGCCGCCGGCGTTTGGCTGTCTCCATGGAAACTTGATGGGCCCTTCGA
AGGAGGGCCAGCAGGTCGACTTTAGGGCCATTGATCACGCTATTAAAAAG
AGACGGAGGAACTCGGTGTCAAAGTAAAGTTCGGGGTCGCAGAACTGAGG
AGCTCGGTGTCAAAGTTGATCAACGGTGCTAAGGGCCGGGCCTGGGAGGG
GATGGGGGCGTCAGCCATGCCGGTGGGGTGTGCGTGCCCCGAATGCAACC
AACCGATGATGTTGGTCCCGCACTTTGGCGTCGGCTGCGGTTACCGCCGC
CGCCGATATGTGGCCGACGGAGCCGGCGAGATCCGGCCCGGGCGTGCGAA
GCCAGTAGATGGGCTGTGTCGCGGGGCCACGCGGGTGGCTGCGGCGGCGG
TGTCGGCACAGGAGGCAGCAGCCCATGTGCGGCAAACGCCGGCGGGCGGC
TGGCAAGAAGCAGGGGGGCGGGCGGAACCTGATGCATTCGTACCGAGTTT
TGTCCCTTTTTCGGTCCAGTGCAACAACGACAAACCCCAGGAGTTCGGCC
ACATCCCGCGGAACTAATCGATAGCGCTTTTTCCTCGTCTTGTGGCATGC
GGACGTGTGTCTTGCTTGCACTCTGTTTGCCACTCTGCTGTTGAGGTCTT
AAGTGCGGGCTGGCCGCTCTTGCCCATCGTGATGACAGTGTGTGTCTCGA
ACGTTGGTCCAGCCAAGCCTAGAAGGGTCTCATGGTTTCCCTGCAGATTC
TTAAACCGTTTGGTGGCAAACCACGGAAGCACCCTCCTCGCGACTCTCGA
ATGTTCGAAAGGAGGGTGTTTGACGGGATGGAATTGCGCGGTACTTTATT
TTCCTGCTTGCAATGTGGCATTCATGGGTACCCGCAACGGCTGAAAGCGA
GGTCCATGCTTGGACCCGAAACGTCTTCTCCTTCCCAACTTGGTGGTTTT
CTATATGGCAGCAAGGCGTGTCAAGCCGACCTTGATGTAGCCTTCTCCCG
CTTCCATGGTGCCCCATCTTGATTCGGGGTATGCATTTGCACATGCATGA
CTCTTCTCGTGTGTGTAGTGCTTGCTACCTGTCTCGTCGCTACCCCGCCC
TTACCGCAGCCTTCTACCCCCCAGGATGCGGCCTCTCGCTTCTCGCTTTT
CTCGCACGCCCCATCTCCTTACCATGTGCCGTCCGTACATGTGCTCTCCG
CTGTGTGTGAAAACCATGCATTGACACGACACATATACACAGGACGCAGA
TCGCATGGCGTCCCTCTGGATGCCCAGCAACGACGTGATGTGCATCCACC
CGGGGGACGAGCCGGTGCTGGGCCAGCAGGCCGTCGCCCGGTCGTGGCGA
TCCCTCTTCCGTTCCGGGGACGGCCGCTTCTCTAGCAGCGTCATCAAGGT
ACGAAGTACGATTGAAGAGTGTGTGCTTGCTCCTTCCCATCGTTCCGTTG
TTCCGCGGTCCGTGCAAATGCTTCGTTTCATCTAAGGGTCGCTTGTCCAA
CGAGTGAGCGAAGCGAATGACAGTGAGTGAAGCCAAGTGGAAATCGAGTA
CGGTGTTCTTCCAGTACTTGCGCGAAGTGTTCCGTTGCGGGTGTATGTCC
ACTTGTGGGGTAGAGTATCGCTAGCTTGCCGCTGCAGCCGCGGCAGCCTT
TTGCCTAGGTGGTTCGCCTAGGTGCCTCCCCGCCCCCCGCGCCGCCCCTG
ACTCCTGCAACCCCGGCACCCCTTCCGCTGGCCCCTTTTCTCGCAATTTT
CTCTTTTTATTTTCGCCATGTGCCGGTCCTTGCTTGCCCTTGCCCCCCGA
ACGGTTCTAGCCCACGGACGTGAGGATAAGGGTGAGGGGAACCACGGCGA
TCGTGCAGTGCAACGAGGAGGTCACCTCCAGGCAGAACGCGGCGGCGGCA
GCGGCGGCGGCGGCAACGGCGGCGGCGGCGGCAACGGACCCTACGCTGCG
ATCTTTCTCTTCCGCGCCGCCGTCCGCGCTGAGCTCGTTCGGTTCGTCTT
CCAAGGCCGACGACGACGACGACAGCAGCAGCTTCGGCGACAACCCAAAG
CACAAGGACCCGGCCGCCTGGCTCGCCCACGTCATCTCCGAGAACCCTTA
CGAGCCCGGCTCGGAGAAGTCCATCGTCAGCAACCCCACGACGCCCCAGG
ACAGGGCCAGGATCAAGAAGGCGGTGGGCAAGCACGGGGCGGCGAGCATC
AAGAAGGCCGTCGCCGCGGCGTTTGCCCAGTCCGACGAGGAGACGAGGCT
TGCCAACCTGGCGAAGCGGAGCAAGAAGGGGGGAGCTTTCTTGAGCGGGG
GCGGGGGCGGCTCCGAGAGAAGGAGCAAGGTTAAGCCGCGCGTGCTCAAC
GTGACCAACATCTACCGGAAGGCTGGGGGGAAGTGAGTGGGGTCTATTTT
GTTAAGGGTATGCGTGTGTGTGTTTGGGGGGGGGTCGTGCGCGCGCTTTT
GTTGTGAATGCACGGCGTGGCCAGGGGAGTCGCGGGCGCTGCTGCGGAGG
GCGGTGAGAGAGCTCGGCGAATTGCTAACAACCCGGGAGGCGAAAATGAG
TCCGGACAGCGAAAAGGCCAAGTCGGAGTATGACTTCTGGTGCATGCTCT
GTGTATACAACTATGACATGCTGAATCAGCCACAACGACAGATGCGACAG
CAAAGGACCGAAAATACATGGTACTTATATTTAGTTATGGGAATCACCAT
GACGAATTCCAAACAAGGTACGTATAGACTGCTAGTCGGGAGCCTGACGA
TGGAACTTTTTGAACAGCTTTATTTTTTTTCTTTGCTCCAGAACTTTCCG
TGCAATGGAGCTCCGTCGAACCTCTGCCACCGGTGTGCCTCTAAACCCTG
CTTTATTGCGATTGTTTTCCTGAAAGCAATCGATGCTACTCATCCACGGA
CGAAATGCATCGAATCCATGAAGGGCATGGCCTTGTCTCGTTTAGTTTCG
TTCATGTTTCCAAACCTTAATCGTACGGCCCCGGTGCCCAAAAATTGACG
CACGGGATGATGTGTGTGGCCGCTGGCCGCTGCTGTGTCGCTCTGGCTGG
CTCGCCCCCGCGTGTGTGTGACAGGTGGCTCATGGTTCACCACCACGCGA
GTCTGCCACCGACGGGCAAGTCGGGCAGCAGCCGGAGGGTTGCTATGGGG
ATCGACGGCTTGAAAGATGTGAGAGCGTTGTTGTTGTTGTTGTTGTTGGT
GGTGGTGGTGGTGGTGGTGGTGCTCGTGCGGTCGTTGTCGTCGTAGTCGT
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGCGGACGATGT
TGTTGATCCATCTAGTGTCATCCCGCTGTGTTCCCTCTTCGTCCAACACG
TATAAGTATACCCATCGCTTGTTGTTGCCCCTCTCCCTTTTCGCTCCCGC
GGAATTCTTCTACCTTCCGATGTTGACGACCAAAAATAGGGCCTGGAGGG
CATGCCTCGCATTATCAACCTGTCGGAACAGGGCGGCGGCTTCGGCGGGG
GTGGCGGCAGCAGCAAGGATAACAGGCTCGAAGAGATGCTGGAGGCGTTA
CGTAACCGTCTTCCGGGCGGTCTTCCTGGCGGTATCGGCGGAACGGGGGC
GGGAAGGTCCGTAAGAGCGGGGGGGGGGGGGGGTGTACTCATAGCCGTGC
ATGCCGTAGTCGTTAGACCGTTGGCCTTGCATGTCTTAGCGGTTTGACGA
TTGACCACGCGCGTCCTCGATAGGATAGAGCTTTGTTCCCACTGAACCGA
TCATCACTGATGGCCAATCGTTCGTCCCTACTTTGCCAAAGGTGTCTCAA
AAACGTTTTCCCTACCCCATCTATCCTAACGATATCGCTTTGTAGGGGGG
GGGGTAGTTTGTCCCTTGACGCCTCTTTGTTGTTTGTATCGAGAAGGGGT
GGGGTGCTGGGGGGAAGGGCTAAGTATGTTCATGAGGAGGAGGCGGGCCA
GTCGAGGGTGACCTGACCTGACGCTGTCGTTTTTGTGGTGTTTGTGCAGC
ATAGAAAAGAGATATTTTAAGCATCTTCTCCAGCAGAAAAGGAGCAAGAA
CAGGGGTGTCACGACCGCCAAGAAGGCGTGACCGGGGAGCGAAATTGACC
TCTTGAAGCACACATCCTCACGATTGAAACACCAGCATCTGCTTTAATAG
TTGTCGAATGACACGGTTGGAGGCGGAAGCCACCAAGCTTTTATTTATTT
ATTTATTTGTTCTCCTTTTTTTGTTCTGCCACTTCTTTCTCGCGTGTTGT
TCTGTTGACGCTTTTCTTGGTTATTTTTCGTTTGCGAAATGTTTGCCCAT
TCTCGAATCACACCGTTAGCATCAACAAGCACGGGATGTAGTCAAGATGA
CCTCCGGTGTGTTGATTCAAGATTACCCGGTGGCAATAAGGCCTAAGATG
TAGATCGTTTGCCTGTTGGTTGCTTTCATTTTTTTTTTTTGCGTTCTTCG
GTACAAACACACGACGCAAGACAACAGGGCTCCATCAGGCGGAATGGTAA
TCATCGGCGGCGGCGACGACGAT
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9378:119..6491-

>mRNA_Ecto-sp8_S_contig9378.30863.1 ID=mRNA_Ecto-sp8_S_contig9378.30863.1|Name=mRNA_Ecto-sp8_S_contig9378.30863.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1656bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9378:119..6491- (Ectocarpus species8 EcLAC_412)
ATGAACACGCCGATGAGGGCCAGGAGAAGAGGAGGGCGCCGCGTGGCCGG
CCTCTGCCGCTGCGTCGCCCTCGCGGCAGTCGCTGCAAGAACGCAGGCCC
TCGTCACGTGCGGCAGCACTGCTACTGCATGGTCGCCGTCTTGCAGTGGC
AGCGGGAGGTCAACCATCACCACCACCACCACCACCACCGCGGTGATGCG
TGACCCCTCGTCGCACGGCCGGGTGGGCAGAACAGGCGCCCGCAGCAGCT
GGGGACAACGAGCAAGCAGCCAGAGTTCGAGACCAACAGCAGCAAGGGTA
TCGACCTCCCTGTCGGCGGCGTCTGGTAGCAGCAGCAGCAGCAGCAGCAG
CGGGATCAATGCCGGCGACGGAGACTCCGGCGAGGGCGACGGCGGCGGCG
GCGGCATCGGTGTCGGGGGAGTGTGGGCCGTGCAGGACGAGGAGGACTGG
GAGTTCGAGGAGGAGGTCCAGCGGCTCGAGGAGAGGCTGGAGAACGCCGT
CAAGAACGAGGACTACAAGGGGGCCACCAAGTGCAGGGACGACCTCTACA
GGATTCACATGGACGAGACGTCCGCCGTCCTGTCCACCAACTCGGCGTTC
TACGCAGCTTTCACGGCAAAGGACGCAGATCGCATGGCGTCCCTCTGGAT
GCCCAGCAACGACGTGATGTGCATCCACCCGGGGGACGAGCCGGTGCTGG
GCCAGCAGGCCGTCGCCCGGTCGTGGCGATCCCTCTTCCGTTCCGGGGAC
GGCCGCTTCTCTAGCAGCGTCATCAAGCCCACGGACGTGAGGATAAGGGT
GAGGGGAACCACGGCGATCGTGCAGTGCAACGAGGAGGTCACCTCCAGGC
AGAACGCGGCGGCGGCAGCGGCGGCGGCGGCAACGGCGGCGGCGGCGGCA
ACGGACCCTACGCTGCGATCTTTCTCTTCCGCGCCGCCGTCCGCGCTGAG
CTCGTTCGGTTCGTCTTCCAAGGCCGACGACGACGACGACAGCAGCAGCT
TCGGCGACAACCCAAAGCACAAGGACCCGGCCGCCTGGCTCGCCCACGTC
ATCTCCGAGAACCCTTACGAGCCCGGCTCGGAGAAGTCCATCGTCAGCAA
CCCCACGACGCCCCAGGACAGGGCCAGGATCAAGAAGGCGGTGGGCAAGC
ACGGGGCGGCGAGCATCAAGAAGGCCGTCGCCGCGGCGTTTGCCCAGTCC
GACGAGGAGACGAGGCTTGCCAACCTGGCGAAGCGGAGCAAGAAGGGGGG
AGCTTTCTTGAGCGGGGGCGGGGGCGGCTCCGAGAGAAGGAGCAAGGTTA
AGCCGCGCGTGCTCAACGTGACCAACATCTACCGGAAGGCTGGGGGGAAG
TGGCTCATGGTTCACCACCACGCGAGTCTGCCACCGACGGGCAAGTCGGG
CAGCAGCCGGAGGGTTGCTATGGGGATCGACGGCTTGAAAGATGGCCTGG
AGGGCATGCCTCGCATTATCAACCTGTCGGAACAGGGCGGCGGCTTCGGC
GGGGGTGGCGGCAGCAGCAAGGATAACAGGCTCGAAGAGATGCTGGAGGC
GTTACGTAACCGTCTTCCGGGCGGTCTTCCTGGCGGTATCGGCGGAACGG
GGGCGGGAAGGGCTCCATCAGGCGGAATGGTAATCATCGGCGGCGGCGAC
GACGAT
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