mRNA_Ecto-sp8_S_contig9370.30853.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9370.30853.1
Unique NamemRNA_Ecto-sp8_S_contig9370.30853.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: D7FM26_ECTSI (Putative nuclear LIM interactor-interacting protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM26_ECTSI)

HSP 1 Score: 500 bits (1288), Expect = 1.070e-176
Identity = 315/319 (98.75%), Postives = 317/319 (99.37%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDDADVDCILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-SANGDGQQELQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLTAREEMELELEF 954
            DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDDADVDCILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SANGDGQQ+LQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLT+REEMELELEF
Sbjct:    6 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDDADVDCILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANGDGQQQLQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLTSREEMELELEF 324
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A6H5L173_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L173_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 1.770e-163
Identity = 290/321 (90.34%), Postives = 293/321 (91.28%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDDADVD--CILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSANGDGQQ-ELQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLTAREEMELELEF 954
            DMDECLLHSKFHGPGAASEAYRQLEERP+AVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR ALFDD+DDADVD  CIL XXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX          ELQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLT+REEMELELEF
Sbjct:  132 DMDECLLHSKFHGPGAASEAYRQLEERPNAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRAALFDDEDDADVDVDCILDXXXXXXXLLEGCLEAGQQERTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLTSREEMELELEF 452
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A836C7A9_9STRA (NLI interacting factor-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A9_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.350e-86
Identity = 138/202 (68.32%), Postives = 160/202 (79.21%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLG-VESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDD 603
            DMDECLLHSKFHG G+    YRQ EERP+ + EVNSF + LDDG  AQVN RPGL  FLE LA+  + +VFTAAMPDYAGPVLD +DP G L  +RLYRSSCRQV+GAFLKDLSVLG V      R VL+DNNP SF+CQPTNGILV SFYDD  DTALASV+QL++HL+ A DVRPIL+DMFRL++LL EYR  LF ++D+
Sbjct:   34 DMDECLLHSKFHGLGSID--YRQQEERPEDIGEVNSFCIPLDDG-VAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDE 232
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A835Z333_9STRA (NLI interacting factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z333_9STRA)

HSP 1 Score: 266 bits (680), Expect = 3.010e-86
Identity = 135/191 (70.68%), Postives = 151/191 (79.06%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVE-STDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGE 570
            DMDECLLHSKFHG GA S  YRQ E+RP+ V EVNSFW+ALDDG  AQVN RPGL  FLE LA+  + +VFTAAMPDYAGPVLD IDP G L  RRLYR+SCRQV+G FLKDLS LG   +T+  R VL+DNNP SF+CQPTNGILV SFYDD  DTALA VMQL+R L+   DVRPIL+DMFRL+ LL E
Sbjct:    6 DMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDG-VAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 195
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A836CB86_9STRA (Putative CTD small phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB86_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.620e-61
Identity = 106/193 (54.92%), Postives = 136/193 (70.47%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKG-AFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR 576
            D+DECL+HS F       + YRQ E RP+ +N V+S  + L   +   VN+RPGL  FLE L+ DY+ +VFTA   +YA  VLD IDP+GT FH RLYR SCRQ +G  +LKDL     E+  + RTVLVDN+PLSFICQP+NGILV+S+YDDP+D AL+SV++LIRHLD   DVRP L  +F L+ +L EY+
Sbjct:   23 DLDECLVHSVFPN----GDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEA--LERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQ 209
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: H3GXJ8_PHYRM (FCP1 homology domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GXJ8_PHYRM)

HSP 1 Score: 197 bits (501), Expect = 1.280e-58
Identity = 102/196 (52.04%), Postives = 131/196 (66.84%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNE-VNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTAL 585
            DMDECL+HSKF         YRQ E RP+ + +  +SF + +DDG+ A VNKRPGLD FLE  A+ Y+  VFTA +  Y  P+LD +DPKG LF  R +R SC+Q KG FLKDLSV  V   D+SR +LVDNNP+SF+ QP+NGI V SFYDD ND  L S+ +++  L +  DVRP L  +FRL  LL E++  +
Sbjct:   46 DMDECLVHSKFQN----EVEYRQSEFRPEQLEDFADSFEIVMDDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRESCQQRKGMFLKDLSV--VRGGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLSKVLASLQEVEDVRPRLHQLFRLADLLAEHQRVI 235
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A662Y5D0_9STRA (FCP1 homology domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662Y5D0_9STRA)

HSP 1 Score: 195 bits (496), Expect = 7.450e-58
Identity = 101/196 (51.53%), Postives = 132/196 (67.35%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEV-NSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTAL 585
            DMDECL+HSKF         YRQ E RP+ +    +SF + +DDG+ A VNKRPGLD FLE  A+ ++  VFTA +  Y  P+LD +DPKG LF  R +R+SC+Q KG FLKDLSV+    TD+SR +LVDNNP+SF+ QP+NGI V SFYDD ND  L S+ +++  L +  DVRP L  +FRL  LL E++  +
Sbjct:   48 DMDECLVHSKFQN----EVEYRQSEYRPEELEAYGDSFEIVMDDGERAVVNKRPGLDRFLEEAAKHFDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRASCQQRKGMFLKDLSVV---RTDLSRVILVDNNPVSFLLQPSNGIPVPSFYDDVNDRTLDSLTKVLASLQEVDDVRPRLHQLFRLADLLAEHQRVI 236
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A3M6VFT3_9STRA (FCP1 homology domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VFT3_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.070e-57
Identity = 98/196 (50.00%), Postives = 130/196 (66.33%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNE-VNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTAL 585
            DMDECL+HSKF         YRQ E RP+ + E ++SF + ++DG+ A VNKRPGLD FLE  A+ Y+  VFTA +  Y  P+LD +DPKG LF    +R SC+Q KG FLKDLSV  +   D+SR +LVDNNP+SF+ QP+NGI V SFYDD  D  L S+ +++  + +  DVRP L  +FRL  LL E++  +
Sbjct:   46 DMDECLVHSKFQN----EVEYRQNEYRPEQLEEYIDSFEIVMEDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDVLDPKGNLFAGHFFRESCKQRKGMFLKDLSV--IRDGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDTKDRTLESLSKVLASMQEVEDVRPRLHQLFRLADLLAEHQRVI 235
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: K3WRS1_GLOUD (FCP1 homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS1_GLOUD)

HSP 1 Score: 189 bits (481), Expect = 2.580e-55
Identity = 98/196 (50.00%), Postives = 132/196 (67.35%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVN-SFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTAL 585
            DMDECL+HSKF+        YRQ E RP A+ + + SF + +DDG+ A V+KRPGLD FLE  ++ ++  VFTA +  Y  P+LD +DPKGTLF  R +R SC+Q KG FLKDL V+     D+S+ +LVDNNP+SF+ QP+NGI V SFYDD ND  L S+ +++  L +  DVRP L  +FRL  LL E++  +
Sbjct:   70 DMDECLVHSKFYN----EVEYRQSEYRPTALAQYDDSFEIVMDDGERAIVHKRPGLDKFLEEASKHFDVYVFTAGLEAYGKPILDELDPKGTLFTGRFFRESCQQRKGMFLKDLRVV---RKDLSKVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLTKVLTSLRELDDVRPRLHQLFRLADLLAEHQRMI 258
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BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Match: A0A8K1CRD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRD5_PYTOL)

HSP 1 Score: 188 bits (477), Expect = 5.140e-55
Identity = 98/196 (50.00%), Postives = 133/196 (67.86%), Query Frame = 1 
Query:    1 DMDECLLHSKFHGPGAASEAYRQLEERPDAVNEV-NSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTAL 585
            DMDECL+HSKF+   A    YRQ E RP+++ E  +SF + ++DG+ A V KRPGLD FLE  ++ ++  VFTA +  Y  P+LD +DPKGT+F  R +R SC+  KG FLKDL V+    +DMSR +LVDNNP+SF+ QP+NGI V SFYDD  D  L S+M+++  L +  DVRP L  +FRL  LL E++  +
Sbjct:   46 DMDECLVHSKFYNEMAE---YRQDEYRPESLQEYEDSFDIEMEDGERAIVYKRPGLDRFLEEASKHFDLYVFTAGLEAYGKPILDELDPKGTIFAGRFFRESCQMRKGMFLKDLRVV---RSDMSRVILVDNNPVSFLMQPSNGIPVPSFYDDAADRTLDSLMKVLMSLTEVEDVRPRLHQLFRLADLLSEHQRTI 235
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9370.30853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM26_ECTSI1.070e-17698.75Putative nuclear LIM interactor-interacting protei... [more]
A0A6H5L173_9PHAE1.770e-16390.34FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A836C7A9_9STRA1.350e-8668.32NLI interacting factor-like phosphatase-domain-con... [more]
A0A835Z333_9STRA3.010e-8670.68NLI interacting factor (Fragment) n=1 Tax=Tribonem... [more]
A0A836CB86_9STRA8.620e-6154.92Putative CTD small phosphatase-like protein n=1 Ta... [more]
H3GXJ8_PHYRM1.280e-5852.04FCP1 homology domain-containing protein n=12 Tax=P... [more]
A0A662Y5D0_9STRA7.450e-5851.53FCP1 homology domain-containing protein n=4 Tax=Pe... [more]
A0A3M6VFT3_9STRA4.070e-5750.00FCP1 homology domain-containing protein n=9 Tax=Pe... [more]
K3WRS1_GLOUD2.580e-5550.00FCP1 homology domain-containing protein n=1 Tax=Gl... [more]
A0A8K1CRD5_PYTOL5.140e-5550.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9370contigEcto-sp8_S_contig9370:3..3049 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score503.1
Seed ortholog evalue9.8e-140
Seed eggNOG ortholog2880.D7FM26
Model size957
KEGG koko:K15731,ko:K17616
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
Exons3
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
Ec32 ortholog descriptionNLI interacting factor
Ec32 orthologEc-01_010410.1
EC3.1.3.16
Cds size954
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03021
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145292.7895744-UTR-Ecto-sp8_S_contig9370:2..51681145292.7895744-UTR-Ecto-sp8_S_contig9370:2..5Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9370 3..5 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145292.8050578-CDS-Ecto-sp8_S_contig9370:5..1461681145292.8050578-CDS-Ecto-sp8_S_contig9370:5..146Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9370 6..146 +
1681145292.8181427-CDS-Ecto-sp8_S_contig9370:699..8671681145292.8181427-CDS-Ecto-sp8_S_contig9370:699..867Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9370 700..867 +
1681145292.8305595-CDS-Ecto-sp8_S_contig9370:2404..30491681145292.8305595-CDS-Ecto-sp8_S_contig9370:2404..3049Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9370 2405..3049 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9370.30853.1prot_Ecto-sp8_S_contig9370.30853.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9370 6..3049 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9370.30853.1

>prot_Ecto-sp8_S_contig9370.30853.1 ID=prot_Ecto-sp8_S_contig9370.30853.1|Name=mRNA_Ecto-sp8_S_contig9370.30853.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=318bp
MDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNK
RPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSS
CRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYD
DPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDD
ADVDCILDDDDEEEEDLLEGCLEAGQQERAEAAAAPGGDEKGLLLDVLVA
EEEQQQQQGSANGDGQQELQGEDVECLKDDDDDESVKTEACSEGSGDSSL
GDESLTAREEMELELEF*
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mRNA from alignment at Ecto-sp8_S_contig9370:3..3049+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9370.30853.1 ID=mRNA_Ecto-sp8_S_contig9370.30853.1|Name=mRNA_Ecto-sp8_S_contig9370.30853.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3047bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9370:3..3049+ (Ectocarpus species8 EcLAC_412)
GATATGGACGAGTGCTTGCTGCACAGCAAGTTCCACGGGCCGGGGGCGGC
CTCGGAGGCGTACAGACAGCTCGAGGAGCGACCGGACGCGGTCAACGAGG
TCAACAGCTTTTGGGTTGCCCTCGACGATGGCGACACTGCGCAGGTGGGC
TTTTCCCGAATAATGTGTGATCACCTATGGAAGTGAATGTTGTCGTTGTC
CGATTTTTTTTTGGCGCGTGCCCCTGACATGACCTTCCCGCCCCAACAGT
TTCCCTGCCTTTGCACGCGGCGAGGAAAGGGTGCCCGCCCCCCTCCGTTG
GCGCGGCGGCGCTCTCGTTTATTTTTATAGCCTGCTCTGCACCTCTTCCG
CTCACCATGTACCGTTTGTCACATCCGACTCTTTCCTGGAGTTTTCAAAA
AAGGTTCTATTTTTTTCTGCCCCTCCTCTCGCCCGTTCGTTTCTTCTATT
TGTGACGAAAACCTGTTGTGTTTGTACAATGCTACGCACGACCCAAACTG
CTAACAACATTGATGTAGCAAGCATGCAGCCCGTGGTCAAGCGCTGCAGC
ACCTGCAGCCACGGGCGTCTCAACACGCCCGTGCCCTGGTAGTGCTACGT
GGCTCTTTTGTCTGTTTTGTTTATTTTTTACTCTTGGCGGGTCGGGAAGA
AGTATCGAATTTCTCTTCTATGTTTGCTGCTTGATGGTCCCCGATAGGTG
AACAAGCGACCTGGCTTGGACCCGTTCCTGGAAGCGTTGGCGAGAGACTA
CAACACAATTGTGTTCACGGCGGCCATGCCCGACTACGCTGGGCCGGTGT
TGGACTACATCGACCCGAAGGGCACCCTCTTCCATCGCCGACTCTACCGC
AGCAGCTGCAGACAGGTAGGGGGGGTAGTATTGCGCTGCGCAGCAGCAGC
GGTTGGTGGGCTAATTACGATGTTTCAGGTCTTTTTCGCTGGGCTGCGTG
GGAGTCCGTTGAGTTTTTTTTTTCACTTCTTGCCTCCGTCGATCTCCACG
GAGCAGTGTTGTATCATATGTGTGTCCAGTCCTTGCTGCTGGTAGGAAAC
TACAATACCACAACTCCGACCTCGTAATTTCGTCCAACAAGCCTTGCCAG
CGGTTGGGCAGGTGGGTAGGCGGCTGTACTTTTTCTTTCTTTCGGGGCCT
CCTCTCTTCCATAGAAGAATTTGTACTGCACGTTCTCCTCTCTGTGCAAT
TGTACCACTTGTGTTCTCTCGACCCTCTCCCTCTCCAGCTCTCTCTCCCC
CGGCCTTTACAACACCACCAACACGCACAGGCCGTTAGCAACTGTTTCCA
CGAACACGTTCCTGGTCCTAGAACACGTTTGCCAACCTTTTTCTCTCTCC
CACCATTTACCTCATGCTCTCTTTTTGGGCGGTCCCTTGGTGACGGCTTA
CGCCAGCAACGTCGTGATGACCCTTGTTCACAGGGAATCAAAAGCCGTGC
CCCTCTGCTGCTACTGCTGTTCAGTCGATTCGTCCATTTCGAAGTTGGTT
AAATATTCTAAAGTTGGCTTTTTCCGAACGCCTCAATGAGCGGTGCGCCA
CAGACAAAATGGCGCGTTCATGGCGTGCAAGGTCCCGCGCTGCGTTAGTC
CGACATTTTTGTGATGATTGATGTTTGTTTCCAAGTCTCCTTTTTGATGT
TTGCAGCCGCGGTGGTAGTTGTAAACGCGCAACACTCCAGTTTGTGAAAG
GGAAGCCTCGTGTTGACGGTTTATCTGTGTTTTGTAGTCTACCTCTCTAG
TCCTCGCCACGAAACAGTAGTTGGCAGCAACCAACCCTACGCGCGCATGC
AGTGCAGGGGACTCCTTTTTTCCATTTCCGAAGTACCCGTGACGCACGTA
GATAGAGGACACCCTGCACTTGTATCTACCCGACGCGCGAACTTTGGACG
GCAGTCATGCTGCTCAAGCTTATTTATAGAGACTGGTGTAGGCATCAGCA
TAAAGCCTCGCGTCATTTGTCGAGTTTTCATGCATGGGAAACTCTTCCAA
TGGGACACCATTCATGAGCGCTATGTGTTTCCGCTCGCCAACTAAATAGC
AGCTGCCAACTGACCATAGCACGAAAAGTCAGGGCCCACGTGTTTGGTTG
CTTTTCGGAGACTAAACAAAAAAGTGGTTGATGATTACACCTGGAGCGAC
AAATAGTGGGTTTGTTTCCCATACAACAACGGCCTGTGTAGCTTGGCAAG
CCCGGACCACTGGGTCTAATGTGCATACCAGCGTTACCCACGGAGCCCCC
ACAAACACAACGTTGTAAATATACAGCAGTAACACAAAGCCGCTCGGAAG
CACCGTCAGTACTCACTTCGCAGGCAACATTGCCATGTCGGTATTATTTC
TAAATGGTGTTCCCCCGCCTCCCGTCCCTCGCGCCGTTTCGGAAATGACC
AGGTGAAGGGTGCCTTCCTGAAGGATCTCTCGGTGCTCGGGGTGGAGTCG
ACAGACATGTCCCGAACCGTGCTGGTGGACAACAACCCGCTCTCCTTCAT
CTGCCAGCCTACAAACGGCATCCTGGTGGCCTCGTTCTACGACGACCCGA
ACGACACCGCTCTCGCCAGCGTGATGCAGCTCATCCGGCACCTGGACCAG
GCCGGAGACGTGCGCCCCATCCTCAAGGACATGTTCCGCCTCGACACTCT
CCTCGGCGAGTACCGAACGGCCCTGTTCGACGATGACGATGATGCCGACG
TCGACTGCATCCTGGACGACGATGACGAGGAGGAAGAGGACTTGTTGGAA
GGGTGCTTGGAGGCGGGGCAGCAGGAGAGAGCAGAGGCGGCGGCGGCGCC
CGGCGGGGACGAGAAGGGCCTTCTTTTGGACGTTCTGGTGGCAGAGGAGG
AGCAGCAGCAGCAGCAGGGCAGCGCTAACGGCGACGGGCAGCAGGAGCTG
CAGGGTGAAGACGTGGAGTGCTTGAAGGACGATGACGATGACGAGTCGGT
CAAGACGGAGGCGTGTTCGGAGGGGTCGGGGGACTCATCCCTGGGCGACG
AGTCCCTCACCGCCAGGGAGGAGATGGAGCTCGAGCTCGAGTTCTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9370:3..3049+

>mRNA_Ecto-sp8_S_contig9370.30853.1 ID=mRNA_Ecto-sp8_S_contig9370.30853.1|Name=mRNA_Ecto-sp8_S_contig9370.30853.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=954bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9370:3..3049+ (Ectocarpus species8 EcLAC_412)
ATGGACGAGTGCTTGCTGCACAGCAAGTTCCACGGGCCGGGGGCGGCCTC
GGAGGCGTACAGACAGCTCGAGGAGCGACCGGACGCGGTCAACGAGGTCA
ACAGCTTTTGGGTTGCCCTCGACGATGGCGACACTGCGCAGGTGAACAAG
CGACCTGGCTTGGACCCGTTCCTGGAAGCGTTGGCGAGAGACTACAACAC
AATTGTGTTCACGGCGGCCATGCCCGACTACGCTGGGCCGGTGTTGGACT
ACATCGACCCGAAGGGCACCCTCTTCCATCGCCGACTCTACCGCAGCAGC
TGCAGACAGGTGAAGGGTGCCTTCCTGAAGGATCTCTCGGTGCTCGGGGT
GGAGTCGACAGACATGTCCCGAACCGTGCTGGTGGACAACAACCCGCTCT
CCTTCATCTGCCAGCCTACAAACGGCATCCTGGTGGCCTCGTTCTACGAC
GACCCGAACGACACCGCTCTCGCCAGCGTGATGCAGCTCATCCGGCACCT
GGACCAGGCCGGAGACGTGCGCCCCATCCTCAAGGACATGTTCCGCCTCG
ACACTCTCCTCGGCGAGTACCGAACGGCCCTGTTCGACGATGACGATGAT
GCCGACGTCGACTGCATCCTGGACGACGATGACGAGGAGGAAGAGGACTT
GTTGGAAGGGTGCTTGGAGGCGGGGCAGCAGGAGAGAGCAGAGGCGGCGG
CGGCGCCCGGCGGGGACGAGAAGGGCCTTCTTTTGGACGTTCTGGTGGCA
GAGGAGGAGCAGCAGCAGCAGCAGGGCAGCGCTAACGGCGACGGGCAGCA
GGAGCTGCAGGGTGAAGACGTGGAGTGCTTGAAGGACGATGACGATGACG
AGTCGGTCAAGACGGAGGCGTGTTCGGAGGGGTCGGGGGACTCATCCCTG
GGCGACGAGTCCCTCACCGCCAGGGAGGAGATGGAGCTCGAGCTCGAGTT
CTGA
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