mRNA_Ecto-sp8_S_contig937.30851.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: D7FXU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU0_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 9.480e-133 Identity = 234/251 (93.23%), Postives = 238/251 (94.82%), Query Frame = 1
Query: 1 PITHAQKLIAGGAGEGSEAVGERGSNQSGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSLLPARK 753
P T Q+LI GGAGEGSEAVGERGSN SGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFA FGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETS+LYRGVLFTNWK IWTAAQL+NFKLVPIEYRP+FGNLVAFWWNIYLSLLPA K
Sbjct: 7 PETMEQELIVGGAGEGSEAVGERGSNHSGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSALYRGVLFTNWK------IWTAAQLLNFKLVPIEYRPVFGNLVAFWWNIYLSLLPAHK 251
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A6H5L3A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A8_9PHAE) HSP 1 Score: 287 bits (734), Expect = 9.670e-89 Identity = 158/203 (77.83%), Postives = 165/203 (81.28%), Query Frame = 1
Query: 13 AQKLIAGGAGEGSEAVGERGSNQSGDGEEQRLSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKAS 621
A +LIAGGAGE EAVGER S ++ GEE+RLSSPWALY+RSMSERPLLTKSVTSALVSALGEL GSALRSS P AAPGLLRRTAAFA FGLLVNGPVFHWWYGALE AAARRRKAGE PGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSI ETS+LYRGVLFTNWKA+
Sbjct: 5 ASELIAGGAGEWGEAVGERNSKRNEAGEERRLSSPWALYERSMSERPLLTKSVTSALVSALGELAGSALRSSSPPPLPVGAGTALAVKGRAGAGQRTGTAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALERAAARRRKAGELPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIDETSALYRGVLFTNWKAN 207
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A836CBT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT9_9STRA) HSP 1 Score: 152 bits (385), Expect = 4.030e-39 Identity = 92/212 (43.40%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 106 LSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSLL 741
L+ W Y + E PLLTKSVT++L++A GE +GS L+ S P RR AFA FGL+VNGP FH+WY LE A R K GG I FKV VDR LMTPPYL +TL LR LQ ++ + +Y+ L NWK +WT AQ+INF VP+EYR +FGNLVA W LSLL
Sbjct: 22 LARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERA------------------------RRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKL---TGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWK------LWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLL 200
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A6G0XN93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN93_9STRA) HSP 1 Score: 123 bits (308), Expect = 9.850e-29 Identity = 67/209 (32.06%), Postives = 103/209 (49.28%), Query Frame = 1
Query: 121 ALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSLLPA 747
A Y++ + ERPL TK++TSA + GE++ L+ P LRR AF FG + GP+ H+WYG LE R K+ P K+ +DR ++TPP++A+T+ +L +L G + + + Y LF NW+ +WT Q ++F +P ++R ++GN VA WWN YLS+L A
Sbjct: 13 AEYQKELKERPLRTKALTSASMGICGEILAHVLKKKPIYTVS--------------------------LRRVLAFGVFGGAITGPLMHFWYGVLEQVRTRDDKSLTP-------MQKLFLDRLVLTPPFVALTIFALGVLNGASVQAARSNVRATYFSTLFMNWR------VWTFTQWLSFNFIPPQFRVLWGNAVAVWWNCYLSMLSA 182
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A485LPX3_9STRA (Aste57867_24163 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX3_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.980e-27 Identity = 69/207 (33.33%), Postives = 98/207 (47.34%), Query Frame = 1
Query: 118 WALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSL 738
WA Y+ + E+PL TK+ TSA + GE++ L+ P RR AF +G +V GP+ H+WYG LE R R G T K+ +DR L+TPP++A+T+ L +L G A + ++Y L NWK +WT Q ++F VP +R ++GN VA WWN YLSL
Sbjct: 12 WAKYQDELREKPLQTKAATSAAMGVCGEVLAHTLKKKPIYTVS--------------------------FRRMLAFGLYGGVVTGPIMHYWYGFLE----RMRSGGNKL----TPTQKLLMDRLLLTPPFVALTILMLGVLNGASATAARANLRAVYWTTLLMNWK------VWTFTQWLSFNYVPPHFRVLWGNAVAVWWNCYLSL 178
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: W7TTQ5_9STRA (Peroxisomal membrane protein 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTQ5_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.280e-25 Identity = 76/208 (36.54%), Postives = 103/208 (49.52%), Query Frame = 1
Query: 127 YKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRG---VLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSLL 741
Y + RP+LTK++TSA++SALG+++ S+ + RRT F FG LV GP+ H+WYG LE +K GG ++ KV +D+ L TPP+LA+TL LRLL+ G + +RG V F K + +WT AQ INF V YR +FGNLVA WW+ YLS L
Sbjct: 61 YHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSG----------------------------RRTLGFFLFGGLVTGPLCHYWYGLLE------KKVRGLQGGK-NVAMKVLLDKLLFTPPFLALTLFLLRLLES-------GRPGAAWRGMKQVYFPTLKTNLQ--VWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRL 224
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A812V6Q9_SYMMI (Pxmp2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V6Q9_SYMMI) HSP 1 Score: 108 bits (271), Expect = 1.690e-24 Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 352 FGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSL 738
+GLLV GP FHWWYG LE A + K+ +DR + TPP+L TL +L + + E ++ VL NWK +WT Q +N +VPIEYR +FGN+ A WWNIYL+L
Sbjct: 2 YGLLVIGPTFHWWYGKLEELTAELPERFR-------FIAKLLIDRIIFTPPFLVATLFYRKLFERSSMPEKVAELQRIFLSVLIVNWK------VWTIVQGVNLTIVPIEYRALFGNVCALWWNIYLAL 117
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A836CQ06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ06_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.440e-24 Identity = 66/169 (39.05%), Postives = 89/169 (52.66%), Query Frame = 1
Query: 118 WALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASG 624
W Y+ + PL TK++T+A + A+GEL+G+ LR + P L+R AF FGL+VNGPVFH+WYG LE A RK + GG I FK+ +DR L+TPPYLA+TL LR LQ ++ + +Y+ L TNWKA G
Sbjct: 32 WKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRER------------------------LKRLWAFTVFGLVVNGPVFHFWYGTLEKIA---RKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWKACG 173
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A7R9YBL3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBL3_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.080e-24 Identity = 76/213 (35.68%), Postives = 104/213 (48.83%), Query Frame = 1
Query: 121 ALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGL-------GAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSL 738
A YK + +RPL TKS++SA+++ALGEL+ SAL+ RR F +G L GP+ HWWY LE RR AG + ++ DR +M PP+L L S+ LQ L GAK + + +S++ S +WT AQL+NFKLVPIEYR +FGNLVA WN +L++
Sbjct: 15 AWYKSQLRKRPLTTKSLSSAVIAALGELLSSALKRQRLSA-----------------------------RRLLIFFAYGGLFVGPIMHWWYALLE-RHCRRYGAGTY-----GLLLRLLGDRLIMAPPFL---LGSIFFLQTLLSGSVRGGAKAAREQFASVF----------SSSIKLWTPAQLVNFKLVPIEYRVLFGNLVAILWNAFLAM 179
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Match: A0A8K1C4B1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4B1_PYTOL) HSP 1 Score: 117 bits (292), Expect = 1.240e-23 Identity = 67/212 (31.60%), Postives = 102/212 (48.11%), Query Frame = 1
Query: 106 LSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLL-RRTAAFATFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSSLYRGVLFTNWKASGMGSIWTAAQLINFKLVPIEYRPIFGNLVAFWWNIYLSL 738
+++ W Y+ +++ P+ TK++TSA V GE++G L+ GL R+ AF FG V GPV H+WY LE ++K K+ +DR + TPP+ A+TL SL +++G K S+ +Y G L NW+ +WT Q ++F VP ++R ++GN VA WWN YLSL
Sbjct: 486 VTTAWGKYQTALATHPIRTKAITSAFVGMFGEILGHVLKHK---------------------------TLKGLSPRQVLAFFAFGGFVTGPVLHYWYMFLENQTFTKQKLTPNK--------KLLLDRLVYTPPFTALTLFSLGVMRGSSPKASMETVKRIYWGALLMNWR------VWTVTQWLSFHYVPPQFRVLWGNCVALWWNAYLSL 656 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig937.30851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig937.30851.1 >prot_Ecto-sp8_S_contig937.30851.1 ID=prot_Ecto-sp8_S_contig937.30851.1|Name=mRNA_Ecto-sp8_S_contig937.30851.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=206bp MSERPLLTKSVTSALVSALGELMGSALRSSPPPPLPVGAGTALAVKGRAGback to top mRNA from alignment at Ecto-sp8_S_contig937:4051..8663+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig937.30851.1 ID=mRNA_Ecto-sp8_S_contig937.30851.1|Name=mRNA_Ecto-sp8_S_contig937.30851.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4613bp|location=Sequence derived from alignment at Ecto-sp8_S_contig937:4051..8663+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig937:4051..8663+ >mRNA_Ecto-sp8_S_contig937.30851.1 ID=mRNA_Ecto-sp8_S_contig937.30851.1|Name=mRNA_Ecto-sp8_S_contig937.30851.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=618bp|location=Sequence derived from alignment at Ecto-sp8_S_contig937:4051..8663+ (Ectocarpus species8 EcLAC_412)back to top |