mRNA_Ecto-sp8_S_contig9358.30829.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9358.30829.1
Unique NamemRNA_Ecto-sp8_S_contig9358.30829.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Match: D7FGX1_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX1_ECTSI)

HSP 1 Score: 837 bits (2161), Expect = 2.420e-289
Identity = 442/513 (86.16%), Postives = 447/513 (87.13%), Query Frame = 1 
Query:  145 GLAGLHGLIEGVGPSLVQEANTFFGFIPQRSMIDRR-IEESHKAIELAAVRAIQRCWRRYKKRLADALRAAYAQADAAVCTIQAAYYRYHKKLVWWETRLLRKQNKAALEIQRVYRAHSRVRLRVSVLREEKRALLAKGSRAVPIQAIFRGFIARRNDNLIGLAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWGEVKRQRVRDIDISSGKIQGSARCFLARIWLSKLKMQKETQKEIERRAAVQLQSFWRGCIGKHTGAQAKGQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVHREWKKNSRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNATLRESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNRRRVKHRLEFDSGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARARKEMLSRRRRANQHLFDREQ 1680
            GLAGLHGLIEGVGPSLVQEA TFFGFIPQRSMIDRR IEESHKAIELAAV AIQRCWRRYKKRLADALRAAYAQA+AAVCTIQAAYYRYHKKLVWWETRLLRKQNKAALEIQRVYRAH       S                       +    R        AIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAW EVKRQRVRDIDISSGK+QGSARCFLARIWLSKLKMQKETQKEIERRAAVQLQSFWRGCIGKHTGAQ K QMARV                 HRGRGEWRRVHREWKK+SRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNA LRESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNR+RVKHRLEFDSGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARARKEMLSRRRRANQHLFDREQ
Sbjct:  140 GLAGLHGLIEGVGPSLVQEAKTFFGFIPQRSMIDRRRIEESHKAIELAAVLAIQRCWRRYKKRLADALRAAYAQAEAAVCTIQAAYYRYHKKLVWWETRLLRKQNKAALEIQRVYRAHRLTETSAS-----------------------QNTAGRTRQQRWQSAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWREVKRQRVRDIDISSGKMQGSARCFLARIWLSKLKMQKETQKEIERRAAVQLQSFWRGCIGKHTGAQVKSQMARVXXXXXXXXXXXXXXXXXHRGRGEWRRVHREWKKSSRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNAALRESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNRKRVKHRLEFDSGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARARKEMLSRRRRANQHLFDREQ 629
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BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Match: A0A6H5JAN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN1_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.920e-140
Identity = 217/249 (87.15%), Postives = 221/249 (88.76%), Query Frame = 1 
Query:  934 GAQAKGQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVHREWKKNSRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNATLRESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNRRRVKHRLEFDSGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARARKEMLSRRRRANQHLFDREQ 1680
            GAQ K QMARVKRARHRTAIKLQAAFRGHRGRGEWRRVH+EWKKNSRAARKIQKVFRG RVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNA LRESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRL+                       +D MMVRSNGAWVQLRNFIEPAVA+ARARKEMLSRRRRANQHLFDREQ
Sbjct:    2 GAQVKSQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVHQEWKKNSRAARKIQKVFRGSRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNAALRESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRLS----------------------FEDVMMVRSNGAWVQLRNFIEPAVAKARARKEMLSRRRRANQHLFDREQ 228
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BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Match: A0A6H5JAP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAP1_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.320e-41
Identity = 113/252 (44.84%), Postives = 118/252 (46.83%), Query Frame = 1 
Query:   43 AGAKEASVTERGVCCLAQNCPGLHTLNITGCVEVGLAGLHGLIEGVGPSLVQEANTFFGFIPQRSMIDRRIEESHKAIELAAVRAIQRCWRRYKKRLADALRAAYAQADAAVCTIQAAYYRYHKKLVWWETRLLRKQNKAALEIQRVYRAHSRVRLRVSVLREEKRALLAKGSRAVPIQAIFRGFIARRNDNLIGLAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWGEVKRQRVRDIDISSGKIQ 798
            AGAKEASV                       VEVGLAGLHGLIEGVGP+LVQEA TFFGFIPQRSMIDRRIEESHKAIELAAVRAIQ                                                                                         P+                   IE MLEDRKQELQHAA VR+QATVRGWIGLKRCAAWGEVKRQR+RDI+ISSGKIQ
Sbjct:  204 AGAKEASVXXXXXXXXXXXXXXXXXXXXXXXVEVGLAGLHGLIEGVGPALVQEAKTFFGFIPQRSMIDRRIEESHKAIELAAVRAIQ-----------------------------------------------------------------------------------------PV-------------------IEAMLEDRKQELQHAAVVRIQATVRGWIGLKRCAAWGEVKRQRMRDIEISSGKIQ 347
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BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Match: A0A7S3HAT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAT1_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.000e-37
Identity = 141/483 (29.19%), Postives = 248/483 (51.35%), Query Frame = 1 
Query:  154 GLHGLIEGVGPSLVQEANTFFGFIPQRSMIDRRIEESHKAIELAAVRAIQRCWRRYKKRL---ADALRAAYAQADAAVCTIQAAYYRYHKKLVWWETRLLRKQNKAALEIQRVYRAHSRVRLRVSVLREEKRALLAKGSRAVPIQAIFRGFIARRNDNLIGLAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWGEVKRQRVRDIDISSGKIQGSARCFLARIWLSKLKMQKETQKEIERRAAVQLQSFWRGCIGKHTGAQAKGQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVHREWKKNSRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWN-AT--LRESSPVKPLAFEEGLVGMRV---WLTRPTSAGLAGEGQLTRLNRRRVKHRLEFDSGGRKWINLDDEQDAMMVR-SNGAW 1572
            GL  L+ G+    V++  +F GF P    +++++ +    ++ AA + +QR  +  ++R+    +A+R  +   + A   I    YRY  ++ ++    LR +  A+  IQR++R + R RLR      E+ A  A    AV IQ   R +++R +   +  AI  M   R+ E  +A AV +QA +R  +     ++W E+  +R R++  +   +Q  AR F++ + + KL++Q++      R AA ++++F    + ++        + +  R +   AI +Q  FRG   R   R++  +    + AAR IQ+++RG RV+ WRD+RLN +A  V  R  +E +  +   R RY+  + +  RDS SE DDE +  + W + +D      YW N AT  +    P + LA E+ LV  R+   W+ +    G    G +T+ +RR+ +HR+E+D G  +WINL DE D + V+  +G W
Sbjct:   73 GLDALVSGM--DYVEKGVSFMGFRPVDQHVEKKLADHLDMVQNAAGK-LQREQKALQERINREQEAIR--FKVINKAAGVITNYMYRYKLRMHYYRLWRLRVKTNASGMIQRLFRGY-RGRLRAIAKFLERAAFRACSPFAVMIQRNVRAYLSRLHTPQVSKAIREMYVIRRLEALNAVAVVLQAQMRRHLASHLVSSWTELCHRRDRNVHDAILVMQQLARRFVSTLRMDKLRLQRDNFNAARRTAAKKIKTFCVEGMARYKARLTGDALKKFFREKWTMAIVIQKMFRGFCARERVRKIKIQLALFNYAARDIQRIYRGTRVLHWRDMRLNVIAAFVLDRHYVERKSSIAATRLRYKQFILDNQRDSASEPDDE-EIAEEWLKTYDSARRCYYWQNFATNVITYDEPEEELAHEKNLVNTRIKVYWVVQDCWYG----GIITKYHRRKRRHRVEYDDGDHEWINLQDECDRVQVQHEDGLW 544
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BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Match: A0A5D6XXT6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXT6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.270e-14
Identity = 129/502 (25.70%), Postives = 219/502 (43.63%), Query Frame = 1 
Query:  193 VQEANTFFGFIPQRSMIDRRIEESHKAIELAAVRAIQRCWRRYKKR-LADALRAAYAQADAAVCTIQAAYYRYHKKLVWWETRLLRKQ-------NKAALEIQRVYRAHSRVRLRVSVLRE--EKRALLAKGSRAVPIQAIFRGFIARRNDNLIGLAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWGEVKRQRVRDIDISSGKIQGSARCFLARIWLSKLKMQKETQKEIER---RAAVQLQSFWRGCIGKHTGAQAKGQMARVKRARH-------RTAIKLQAAFRGHRGRGEWRRVHREWKKNSRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLDGGRARYQHLVDEA----GRDSCSEDDDEADATDHWEEIWDEGADHSYWWNATLRESSPVKPL--AFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNRRRVKHRLEFDSGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARA 1620
            VQ A  + G  P+R  +  +     K I  +A   IQ  +R +  R LA   R    +  A   TI+ +Y R      W   R LR++       N +  +IQ + R    V+ R ++ R+  E + L A    AV +QA +R    R+   ++   IE    +R    Q AA VR+Q   R      R      + ++R  +   ++  +Q   R   AR     L+   E Q+ I R   + AV++QS WRG        +A+ Q+ R +R  H       R A ++ A  RG+ GR   R    E++    AAR+IQ+ +R  +  S   +R   +   + M+  M   E  D    + + L+ +      RDS SE     ++ D W +  DE     +W++ + ++   V+P   A E+ ++G+   +  P        G +++ NR + KHR+E+D G   W++   E   + + +  +W  +  F EP++   RA
Sbjct:  384 VQSAQHYRGLEPKRDGLKLKFSIQQKTICNSAALRIQAVYRGHVDRTLAACWRVKMVEMPARR-TIRKSYVR------WRLNRELRRRVARTKLVNASVAKIQALVRG---VQCRAALERDSVETQRLQAWSKLAVGVQAAYRSHWTRKRYQVVHKTIERYRRERTLLAQDAATVRLQRAYRARFHRSRLDDLIVINQKRRLERQNAATTLQRLFRSRAARKAYRALRAAVEAQRAIVRVLVQYAVKIQSRWRG-------HRARRQLVRRQREMHERELRWNRAASRINAGVRGYFGRRVAREARVEFQARWHAARRIQRAYRRFKTPSAERLRFESML--LLMKTHM--LEEGDAAVVKQRELLKKTRAIIDRDSASE----PESDDDWRDFQDESGGQ-FWFSPSRKQRQYVRPNDNALEKAMLGLYCRVYWPLEQQWFS-GYVSKYNREKNKHRVEYDDGDHDWLDFRVEGARIQLYNGYSWTMVSMF-EPSLRTLRA 857
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BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Match: K3WKC7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC7_GLOUD)

HSP 1 Score: 72.4 bits (176), Expect = 1.510e-9
Identity = 116/494 (23.48%), Postives = 223/494 (45.14%), Query Frame = 1 
Query:  193 VQEANTFFGFIPQRSMIDRRIEESHKAIELAAVRAIQRCWRRY-KKRLADALRAAYAQADAAVCTIQAAY--YRYHKKLVWWETRLLRKQ--NKAALEIQRVYRA-HSRVRLRVSVLREEKRALLAKGSRAVPIQAIFRGFIARRNDNLIGLAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWGEVKRQRVRDIDISSGKIQGSARCFLARIWLSKLKMQKETQKEIER---RAAVQLQSFWRGCIGKHTGAQAKGQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVHREWKKNSRAARKIQKVFRGGRVMSWRDVRLNKVAQ----HVFMRQEMEF---QERLDGGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNATLRESSPVKPL--AFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNRRRVKHRLEFDSGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARA 1620
            VQ A  + G  P++  +  +     K I  +A   IQ  +R +  +++A + R    +  A+   I+ +Y  +R + +L   + R+ R +  N + ++IQ + R    RV L  + + E++  +    + AV +QA++R    R++  ++   I+   ++++   + AA V++Q   R      R      + +QR ++                AR   + L+   E Q+   R   R A++LQS WRG   +    + + ++   +  +H  A ++ A  RG+ GR   ++    ++    AA++IQ+ +R  +  S   + L K+      H+    +M     QE L   RA    L+D+   DS SE     ++ D W +  DE  D  +W++ + ++   ++P   A E  ++GM+  +  P        G +TR NR + KHR+E++ G  +W+    E   + + +   W     F EPA+   RA
Sbjct:  382 VQRAQHYRGLEPKQDGLKLKFSIQQKTIANSAALRIQAVYRGHVDRKVAASWRIQMIETPASK-KIRKSYVCWRLNTEL---DKRVKRTKLVNSSVVKIQALIRGVFCRVALERASIEEQR--IKYWSTFAVKLQAVYRSHWTRKHFRVVYKTIDRYRKEQELLKREAAVVQLQRAFRARFHRSRLDDLMAINQQRRQEXXXXXXXXXXXXXXXXARKAYNALRAAVELQRAHVRKLIRYAIKLQSQWRGHHARRQITRYQLELKERETRKHNAASRINAGVRGYFGRRVAQQERVVFQTRLHAAKRIQRAWRRFKTPSAERINLEKMFHQMKAHMLDEGDMAMRKQQEILKKTRA----LIDQ---DSASE----PESDDDWRDFQDEYGDQ-FWFSPSRKQRLYMRPNDNAHERTMLGMQCRVFWPLEQQWFN-GVITRYNRVKSKHRVEYEDGDHEWLCFHVEGSRIQLFNGYCWCMATMF-EPALRTLRA 855
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9358.30829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FGX1_ECTSI2.420e-28986.16Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A6H5JAN1_9PHAE1.920e-14087.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAP1_9PHAE1.320e-4144.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3HAT1_9STRA1.000e-3729.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A5D6XXT6_9STRA5.270e-1425.70Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WKC7_GLOUD1.510e-923.48Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9358contigEcto-sp8_S_contig9358:1..7271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score842.8
Seed ortholog evalue9.2e-242
Seed eggNOG ortholog2880.D7FGX1
Preferred nameC2orf69
Model size1680
Hectar predicted targeting categoryother localisation
GOsGO:0007154,GO:0007267,GO:0008150,GO:0009987,GO:0023052,GO:0030154,GO:0032502,GO:0045165,GO:0045168,GO:0046331,GO:0048869
Exons16
EggNOG free text desc.Uncharacterised protein family UPF0565
EggNOG OGsKOG2800@1,KOG2800@2759,KOG4341@1,KOG4341@2759
Cds size1680
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9358.30829.1prot_Ecto-sp8_S_contig9358.30829.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9358 1..7271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145290.8384156-CDS-Ecto-sp8_S_contig9358:0..631681145290.8384156-CDS-Ecto-sp8_S_contig9358:0..63Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 1..63 +
1681145290.8558004-CDS-Ecto-sp8_S_contig9358:497..6861681145290.8558004-CDS-Ecto-sp8_S_contig9358:497..686Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 498..686 +
1681145290.872898-CDS-Ecto-sp8_S_contig9358:1412..14631681145290.872898-CDS-Ecto-sp8_S_contig9358:1412..1463Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 1413..1463 +
1681145290.8847654-CDS-Ecto-sp8_S_contig9358:1835..19491681145290.8847654-CDS-Ecto-sp8_S_contig9358:1835..1949Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 1836..1949 +
1681145290.9010499-CDS-Ecto-sp8_S_contig9358:2138..22181681145290.9010499-CDS-Ecto-sp8_S_contig9358:2138..2218Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 2139..2218 +
1681145290.910952-CDS-Ecto-sp8_S_contig9358:2639..27691681145290.910952-CDS-Ecto-sp8_S_contig9358:2639..2769Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 2640..2769 +
1681145290.9232628-CDS-Ecto-sp8_S_contig9358:3182..32181681145290.9232628-CDS-Ecto-sp8_S_contig9358:3182..3218Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 3183..3218 +
1681145290.9338498-CDS-Ecto-sp8_S_contig9358:3583..37181681145290.9338498-CDS-Ecto-sp8_S_contig9358:3583..3718Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 3584..3718 +
1681145290.9449673-CDS-Ecto-sp8_S_contig9358:4236..43381681145290.9449673-CDS-Ecto-sp8_S_contig9358:4236..4338Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 4237..4338 +
1681145290.9571493-CDS-Ecto-sp8_S_contig9358:4592..46801681145290.9571493-CDS-Ecto-sp8_S_contig9358:4592..4680Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 4593..4680 +
1681145290.9719503-CDS-Ecto-sp8_S_contig9358:5004..51111681145290.9719503-CDS-Ecto-sp8_S_contig9358:5004..5111Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 5005..5111 +
1681145290.9829004-CDS-Ecto-sp8_S_contig9358:5271..54201681145290.9829004-CDS-Ecto-sp8_S_contig9358:5271..5420Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 5272..5420 +
1681145290.993051-CDS-Ecto-sp8_S_contig9358:5868..59231681145290.993051-CDS-Ecto-sp8_S_contig9358:5868..5923Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 5869..5923 +
1681145291.0038369-CDS-Ecto-sp8_S_contig9358:6330..64911681145291.0038369-CDS-Ecto-sp8_S_contig9358:6330..6491Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 6331..6491 +
1681145291.0172672-CDS-Ecto-sp8_S_contig9358:6743..68221681145291.0172672-CDS-Ecto-sp8_S_contig9358:6743..6822Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 6744..6822 +
1681145291.029332-CDS-Ecto-sp8_S_contig9358:7130..72711681145291.029332-CDS-Ecto-sp8_S_contig9358:7130..7271Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9358 7131..7271 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9358.30829.1

>prot_Ecto-sp8_S_contig9358.30829.1 ID=prot_Ecto-sp8_S_contig9358.30829.1|Name=mRNA_Ecto-sp8_S_contig9358.30829.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=560bp
ALSRGCRSLQALNIAGAKEASVTERGVCCLAQNCPGLHTLNITGCVEVGL
AGLHGLIEGVGPSLVQEANTFFGFIPQRSMIDRRIEESHKAIELAAVRAI
QRCWRRYKKRLADALRAAYAQADAAVCTIQAAYYRYHKKLVWWETRLLRK
QNKAALEIQRVYRAHSRVRLRVSVLREEKRALLAKGSRAVPIQAIFRGFI
ARRNDNLIGLAIEGMLEDRKQELQHAAAVRVQATVRGWIGLKRCAAWGEV
KRQRVRDIDISSGKIQGSARCFLARIWLSKLKMQKETQKEIERRAAVQLQ
SFWRGCIGKHTGAQAKGQMARVKRARHRTAIKLQAAFRGHRGRGEWRRVH
REWKKNSRAARKIQKVFRGGRVMSWRDVRLNKVAQHVFMRQEMEFQERLD
GGRARYQHLVDEAGRDSCSEDDDEADATDHWEEIWDEGADHSYWWNATLR
ESSPVKPLAFEEGLVGMRVWLTRPTSAGLAGEGQLTRLNRRRVKHRLEFD
SGGRKWINLDDEQDAMMVRSNGAWVQLRNFIEPAVAEARARKEMLSRRRR
ANQHLFDREQ
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mRNA from alignment at Ecto-sp8_S_contig9358:1..7271+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9358.30829.1 ID=mRNA_Ecto-sp8_S_contig9358.30829.1|Name=mRNA_Ecto-sp8_S_contig9358.30829.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7271bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9358:1..7271+ (Ectocarpus species8 EcLAC_412)
GCTCTAAGCCGGGGGTGTAGATCTTTGCAGGCGCTCAACATTGCCGGAGC
TAAGGAGGCAAGTGTCCTCCTTTGAAAGAGTTAATGCCCGTGCTGGTTGA
TGATACGATTTGGAGCGCCATGAGAAGCTGCGATGCACCTGTGGAGGACT
CGGCCATAACCCTTGGCCAATTCGTGTGTTTTTTGTTATGGGCGGCTGGG
CTCCCGTCGCAGACTGACCTCGATACTTTCGTAGCTCTCTCCTCTGTCGG
GCTACCTCTTCGCTTCAACTGAGTGCCCTATGTTTGTGCTACACCATGTC
CATGCGCTCTGATCGCCACCACTACCGTGGGTTTCTGAGGCTCCTCTTGC
GCCGAACGAAGCCAAGACAACTGCACGATATGATGCTCCCGATGCTTAGC
CGTATTCTGTGTCTGTAAGCCATGGATATGGCACACGATACAGCAAGCTA
TTCGAATGAAGTGCACTCTCCCTCGAACAACCCACTGGATTCTACAGGTA
ACGGAGCGAGGCGTCTGTTGCCTAGCTCAGAACTGCCCGGGCCTCCATAC
GCTCAACATTACCGGCTGTGTAGAAGTTGGTCTCGCGGGGCTGCACGGCC
TAATCGAAGGCGTCGGGCCGTCGCTGGTTCAGGAGGCAAATACGTTCTTC
GGCTTTATACCACAAAGGAGCATGATAGACCGCAGGGTAAGTCCATCGCC
TTTTCTCGAAACGGACCTTCAAGCAGCGAACCCATTGACTTGGCATGGGC
CTCGCCTTGGTGTGGGCTGTCACAATTCACAAGAGGGTGTGTTCAAGTTA
ATCAGGTTCGTAGTTTAGCACGATGGCGATATTGCTTTCACGCAGCACAC
ACATCACGCCATCTGTATGATAGATATTCTTGGCAGCGTCGTAGTGCTTT
CCGATGGACGGTCGTGTACCTGGCACTTGGGGAATTTTTTCTGTTCCCGG
GCGCTATCCATGCTCCCTGGCAGTCTATGGGCGGTGCTACTATTGTATGG
CTCGTGCAGACACCATCCCTTCCCCGCTTCCGGCGAGACTCGAGGCGCAA
CGTCATATTTTCTGCAACAATGACGACCGGAAACCTCTTGTCCGGTGTTT
TCGTGTATTGTAGGTCCCCAGTTGTACCCCTCGCGAATCACCGGCGTAGC
AATGACGTACACACCAATGATTGATACCTTCACGGCGTGCTGTGCGACCT
CTGCGTATGTTTGCAACGGTAGGGGCTGCTCTACCCTAACCCCGACCTTT
GTCTGACGACCTGTCGCTTTCGGTGGATTTTGACGAGACCTTGGGAACAG
AGAGCGCGAGCGGGCTTCAATGCGCATGCACTACTTGCCCTTGCTTCGCA
GTCAAGCCCCCAGAAACTAACGCCCGCTTTGGTCAATGCCTGCGTTTATC
CATTGACGTCAGATAGAGGAATCGCACAAGGCTATCGAGCTCGCAGCGGT
GCGCGCTATCCAGGTACCGTAAACGACAGACTAAAGCCTGAACGGGACGC
TCTACAATATTCCCGTAGGGCGTGTGTTTCTGGCGCTCTTCCTTCTTCTA
GCTTGGGAAAAGCTAGAGTGTATTGATGGGTGTCTTATTTTTCTCTATGA
GGCAGGCGATTAACCCAGGCTTTACGTGTTTTTCGGTTTTTCGCTGGTCG
TGTGTATTTATTTCCGTTGTTGAATGTCTTTTCTTTGCTTGTATCGTGAC
ATACACAACATTCTGAAGATTTGCAAGTGTCTGTGTGAAAGTCTCACCAA
CATGAGCCCAAATGGCGGCGACCCTGGTAGCCCTGGCGAAAGCGGAAACC
ATCATCGTCTACTGCGTTGTGAACCCTCCTCGCAGAGATGTTGGAGAAGA
TACAAAAAGCGGTTGGCGGACGCGCTGAGAGCCGCCTACGCCCAAGCCGA
CGCTGCGGTTTGCACTATCCAGGCGGCTTACTATCGCTATCACAAAAAGG
TGAGCCCAAGATTTATGTCACTGTTTTGTGCTTGTTGTGTCCTTATCTCT
CGGGGGCACCCACCTGCTTCAATTGTTACTCCGGACCCCCCCCCGCTCGT
TTGCCACGTCGACTGTTCAACGGTTCGACTGGCTCGTGTCTTTTCTCGAA
CCGACATCCTCTGCCGACGCTCCCATGAACGCTTGCAGTTGGTATGGTGG
GAGACACGTCTGCTCAGGAAGCAAAACAAGGCGGCACTCGAGATACAGCG
AGTGTACAGAGCACACAGGTGGGGTGTGGTTGTGCTACATAGCACGTTAG
TCAAGTCATTAGTTAAGGAAAATGGCCCAAAGCCCAACGGAAACGGGCGG
AGTACTGGGCTTTATTAACACCATGACATATTAATAGTACAAGCAAGAAC
AACTTGCTGCGGGCGGGCAATGGTACTCTAGCGGAACGTTTTGTTGCGAG
CGTCTCTGACGGCCAAAATTCCCAACGCGATTTGGAAGACCCCCGAGACA
CCGACGGAGACTGAGTAGCAGGCCTTGGGGATCAGTCGCTGTTGTGGCAA
TCCAAAATCTTATAGTCTGTGGCCCCACAATAAAGTTTTCACGACCAACG
GGGCGCCATGCGTTCGGTGGCCTACGAATACTGCTGAACGTCCGACAAAC
TACGCAAGAAATTGACCTCCAACGTCAACGTCCGTCGAGCAGAGTTCGCC
TAAGGGTCAGCGTATTGCGGGAGGAAAAGCGCGCACTGCTGGCAAAAGGC
AGCCGAGCCGTGCCTATCCAAGCCATTTTCCGAGGTTTCATAGCCAGGAG
GAACGACAATCTGATAGGGGTATGTGTGAATGTCTTCCGGACTGCTACGT
TGCACTTACTAGGGGCGTACGGGTCAGGGGCGGGTCAGGCGGCGGTTGGA
ATAACCCTCTTGTGATGCCTGCGTCTAGTCTGTTCAATCGCCGTTTCGAG
CTCCATATCTTCATTCACTTTCGGCGGTGCCTCCACCTAGGGCACCTTTC
GAAACATACTTGTACTAATTTCAAGCGCGACCACACCCGTTCGGGATTTT
GTCCTTTGGTTGGATGCCATTCATGCGCGGAAAAGTATGAGTTGGTCGTT
AGCACTGACCTGTTTCGACGAGAGACACATGAAAACTCGTTTTGTTCTCA
CCATGGTGGTCAATACAACAGACTAACAAAAACCTCTGCCTCTCAAAACA
CCGCCGGTCGAACACTCCAACAACGCTGGCAGCTGGCCATCGAAGGGATG
CTTGAAGATCGGAAGCAGGTGATTCCGTCAGAACAAGTCGCTGAACGTGG
GCGTCGTACACCTGCACAATGAATTTCCGTTTTTGTTTCTCACCATTCCT
ACGGGTAGCATTGGCTTCTGTCAAGGCAGCCAAGCGACTGCACGCCTGTT
CAACCTCCGCGCCGTTGTATAGTTTTATCGCGGCATCTTCGTGGCCCGGC
CATGTGATCGTTAGAGGTGGACACCCTTTGGCGGCACCCCTGCTCGCGGG
TCGAAGAGAATAAATATAATAGTGCAACACACCCGTGTCTCTCTGCCCGT
CCGTAGCGCCCGACCCTTCCACTGCACGACACTCTCGTCGAAGAAATCGT
AGCGTCGCATACCGAAATGTTCCCCTTTTGCAGGAGCTTCAACACGCGGC
GGCTGTGCGAGTACAAGCCACGGTGCGGGGGTGGATTGGCCTCAAACGGT
GCGCGGCATGGGGGGAGGTGAAGCGACAGAGGGTGCGAGATATTGACATC
AGCTCGGGCAAGATTCAGGCGAGTTGACAACGAAGTATCTCGGTCGAAAC
GCCTCGTTGTGTGAACCGACTTTATTATCCATAGGGTACTTTAGCCATTT
TCAATTCATGACCCGCATAGGCCGACCGACTGGTGGTCAAACGTGGAGGC
AAGCGTAGAGGGGGGCTTGGCAATAATATTGCCCCATGGCGGAACGACCC
ACCCATCGATTTATCGACCATCCTGGAACGCCTGACATTTATTTTCGGGG
ATTCGACGGAAGACCCATTCGTCCTTATCGGGGGAGTGTTTTATGGGGAG
ATCAACTGCTTTGTGTAGGTTAGTGGATTCCCACTTCCGTTGACGCGTGT
ACAGGTAAACCAAGGCTGACTGGGATCAATGTGTGAACGCCACAAATTCA
GCAGCACGGTGGAAGGCAAATAGGCAACAACTGGGTGGTCGACTTTATCG
ACAAGCTACTACAGCTCGTTGGTAACCTTTGCCGCACGGGGGTCGCGTTC
TCCTTTCCCCTGCCCTCTTCCGCTCTCGTCTATCAGGGCAGTGCGCGTTG
CTTCCTCGCGCGAATCTGGCTGAGTAAGCTAAAGATGCAAAAAGAGACGC
AGAAAGAGATCGAGCGAAGAGCCGCTGTTCAACTCCAGGTAAGAGTTTGT
GCCACAGTAGATGACTCGGCGGTGGCCCGTCTCCAACGACACAGTGCACG
AGGCTTTGCTCACGAAATGACATTCTTCTGCTCAAGAGGTCCAGCATATT
TTGCCGTGCGTTATAGGTTCTTTGTCTACCTACTCGGTAGCTCCCCCAAT
CCCCCCCACCCCTCCATTTCGTGGATGCTGTGTGTTAGTTTTCCCACCTG
TACTTCGTCCTCTACGGCGGTTTCATGTGTCCTCTACGGCAGTCGTTCTG
GAGGGGTTGCATTGGCAAGCATACGGGTGCCCAGGCTAAGGGCCAGATGG
CAAGAGTCAAGCGAGCAAGGCACCGCACCGGTGGGTTCAGACCCTTTTGC
CATTCGTTCTTGTGGCCCTGCGTTTGCGAGCAGGAACTAAGTATAATGAA
CAATGCCGGTGGCATTCGAAGCACCGTAGAAGAAGCGCTTTAGGCATTCT
AGGTCCGACTAGATACGGGTACCGTGATGAAATTCGGTGGAATCGCTCGT
CAGCACACATAACCGATGTCCAACAGTGTCGGAAAAGTATGTATGTGTGT
CGCCCCCGCGTTGGTGGGAAGTTGCTCGTGACACTCGTTCTCCGTTCGTG
TCGGGAACAAATGCTGAACGCTCGATAAAATCAAACCTCAAACACCAAAA
ACAGCAATCAAGCTTCAGGCGGCGTTCAGGGGGCACCGTGGGCGAGGAGA
GTGGAGAAGAGTGCACCGAGAGTGGAAGAAGAATAGCAGGGCGGCTCGAA
AGATCCAAAAGGTGATCGAAAAGCAGGGGTCCCGGCAAAATGGCAGCGTT
TTACGTACACTACCACGCCACGCGTGATTGTTCTTTACTCATGTATCTTA
CACGTATCCTTTGCGTTGAGCTTCCCCGCCACCTCCCACCTCTCCGTATC
ACTCGCGTGTCTTATCCGCAGGTGTTTAGAGGCGGCCGCGTGATGAGTTG
GCGAGATGTTCGTCTGAACAAGGTGGCGCAGCACGTGTTTATGAGGCAAG
AGATGGAGTTCCAGGAGAGGTTGGACGGCGGTCGTGCTCGCTACCAGCAT
CTCGTTGACGAGGCCGGCAGGTATTACGTGTTTTCTGTTTCACAAGTCTA
GATATGTGGTTGGTGTAATGGTATATATACTCTGTGTATGGAACACGAGG
GTGGGTTCAGTGTGGGTATATACCTTGAGATTTGGTGTGCACAGATGAGC
CATCGTAACAGCACCACAGTCAAAGGCAACTTGTGAGGATATGAGACACG
TTCATTTTCTCTTGGATGTCTCACCCCAGGGTGCGTGTTATCTCTGCTGG
GGAGATATCTCGCTGCCGCAGTTCCCAATGTGTAGTTCTATAAAGATCGA
GAGTGACAAGACTTGCCGAGCCTCGGATGTCGGTCACGACGCGCTTTTAC
TGTTGTGAGGACGAAACTCAAGAGGACCACTTCGGTTGAGCATTTGGAAG
TGCTCCCCATGTTTTGAATAGTGAACCTGCCCGTCCTGTACCACCTCGGA
TGGACCCCTTGGTTACAGGGACTCATGCAGCGAGGATGACGATGAAGCAG
ATGCCACCGACCACTGGGAGGAGGTAGGGAAACCCTGGCATGCACAGGAT
TTACATTGTGGCAAAGATTTGAATATAGCCTCAACGCAATCGATGGCAGA
GAGAAAGCTGCGCTCTACGAAAACATGGTAACACGTTGAAACCTAAGCTC
GCGGCACTAGTTCGCCTCCCTCCCCACACTATCAGGGGCGCCCGTCCCGA
ACCTGTTCTTGTTGACACTCTCACCTGTTATTCGTTTGTTACCGTGCAAA
CACCCTCGATTTTGATGACGATGCTAGTCATTTTGTGCGCGTCCTCGGTT
TCCTTCAAGCTACACTACTGCGTAGGAGTTCCATACCTGGGGTTTGTTCC
TGTGCTTTCATTCTCCCTGTCCAGCCGTGCATACGATCGTACCCACCGAC
CACTTGATCTTGCCCACCATTGTTCGTTAGATCTGGGACGAGGGCGCGGA
CCATAGTTATTGGTGGAACGCCACCTTACGGGAGTCTTCACCCGTGAAGC
CCTTGGCCTTCGAGGAAGGCCTCGTGGGAATGCGAGTATGGCTAACTCGT
CCGACGTCCGCTGGCCTGGCGGGCGAGGGTCAACTCACACGGTGAGAAGT
TGTCGTCATCAACGCCGCACGGCGAATGCTAGGTAAAGATGGGTCATCAG
CTGCGCGATACCTACGAGTGTCTGACCCAAATCAAAAGCAATAAATGCGT
TCTTTCAGACCAGAAAAGGCACAAGCAGGAAACAAAAGAAGGCTACTACA
AGACACAAAATAATGTGTTGTAGCCATGTGTGATGTTCAGTTTGTGTTCC
GTCTGCTTATCCGCTCCGTGTTGTGAATGGATGGCCTAAACAGGCTCAAC
CGCAGGAGGGTCAAACACCGCCTGGAATTCGACAGCGGGGGGCGGAAATG
GATCAACCTTGACGACGAGCAAGTGAGAGCAACATTCTCCTCGCGTAAGG
CAGGGGTTAAAAGAGACTATATATGTGTCAAGATATTTTGGGGGGCGAGG
TGCGGTGCGCAGTTTGTCCTTCGAGGTACGTTTGGAGCACCATATTAGAA
AAAAAATATGCCACCGCCAATGTGTGAGATCGAAGCGCCATGCCAACCCC
TCGGGTACGGTCGGGACGGTCGGTGTCTGTGCCGTAGCTGCCCTCGCGAG
AGCCACCCAACCCCGAAGCTCTTCACACGCAATACAAAACCCCCTGTGCC
CCCCTGTACACGATATACCTCCTGTGCAAGGACGCCATGATGGTACGGAG
CAACGGGGCATGGGTGCAGCTGAGAAACTTCATCGAGCCTGCCGTCGCCG
AGGCCAGAGCGAGAAAAGAGATGCTTAGCAGGAGGCGAAGAGCCAACCAG
CACCTCTTCGACAGGGAGCAA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9358:1..7271+

>mRNA_Ecto-sp8_S_contig9358.30829.1 ID=mRNA_Ecto-sp8_S_contig9358.30829.1|Name=mRNA_Ecto-sp8_S_contig9358.30829.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1680bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9358:1..7271+ (Ectocarpus species8 EcLAC_412)
GCTCTAAGCCGGGGGTGTAGATCTTTGCAGGCGCTCAACATTGCCGGAGC
TAAGGAGGCAAGTGTAACGGAGCGAGGCGTCTGTTGCCTAGCTCAGAACT
GCCCGGGCCTCCATACGCTCAACATTACCGGCTGTGTAGAAGTTGGTCTC
GCGGGGCTGCACGGCCTAATCGAAGGCGTCGGGCCGTCGCTGGTTCAGGA
GGCAAATACGTTCTTCGGCTTTATACCACAAAGGAGCATGATAGACCGCA
GGATAGAGGAATCGCACAAGGCTATCGAGCTCGCAGCGGTGCGCGCTATC
CAGAGATGTTGGAGAAGATACAAAAAGCGGTTGGCGGACGCGCTGAGAGC
CGCCTACGCCCAAGCCGACGCTGCGGTTTGCACTATCCAGGCGGCTTACT
ATCGCTATCACAAAAAGTTGGTATGGTGGGAGACACGTCTGCTCAGGAAG
CAAAACAAGGCGGCACTCGAGATACAGCGAGTGTACAGAGCACACAGCAG
AGTTCGCCTAAGGGTCAGCGTATTGCGGGAGGAAAAGCGCGCACTGCTGG
CAAAAGGCAGCCGAGCCGTGCCTATCCAAGCCATTTTCCGAGGTTTCATA
GCCAGGAGGAACGACAATCTGATAGGGCTGGCCATCGAAGGGATGCTTGA
AGATCGGAAGCAGGAGCTTCAACACGCGGCGGCTGTGCGAGTACAAGCCA
CGGTGCGGGGGTGGATTGGCCTCAAACGGTGCGCGGCATGGGGGGAGGTG
AAGCGACAGAGGGTGCGAGATATTGACATCAGCTCGGGCAAGATTCAGGG
CAGTGCGCGTTGCTTCCTCGCGCGAATCTGGCTGAGTAAGCTAAAGATGC
AAAAAGAGACGCAGAAAGAGATCGAGCGAAGAGCCGCTGTTCAACTCCAG
TCGTTCTGGAGGGGTTGCATTGGCAAGCATACGGGTGCCCAGGCTAAGGG
CCAGATGGCAAGAGTCAAGCGAGCAAGGCACCGCACCGCAATCAAGCTTC
AGGCGGCGTTCAGGGGGCACCGTGGGCGAGGAGAGTGGAGAAGAGTGCAC
CGAGAGTGGAAGAAGAATAGCAGGGCGGCTCGAAAGATCCAAAAGGTGTT
TAGAGGCGGCCGCGTGATGAGTTGGCGAGATGTTCGTCTGAACAAGGTGG
CGCAGCACGTGTTTATGAGGCAAGAGATGGAGTTCCAGGAGAGGTTGGAC
GGCGGTCGTGCTCGCTACCAGCATCTCGTTGACGAGGCCGGCAGGGACTC
ATGCAGCGAGGATGACGATGAAGCAGATGCCACCGACCACTGGGAGGAGA
TCTGGGACGAGGGCGCGGACCATAGTTATTGGTGGAACGCCACCTTACGG
GAGTCTTCACCCGTGAAGCCCTTGGCCTTCGAGGAAGGCCTCGTGGGAAT
GCGAGTATGGCTAACTCGTCCGACGTCCGCTGGCCTGGCGGGCGAGGGTC
AACTCACACGGCTCAACCGCAGGAGGGTCAAACACCGCCTGGAATTCGAC
AGCGGGGGGCGGAAATGGATCAACCTTGACGACGAGCAAGACGCCATGAT
GGTACGGAGCAACGGGGCATGGGTGCAGCTGAGAAACTTCATCGAGCCTG
CCGTCGCCGAGGCCAGAGCGAGAAAAGAGATGCTTAGCAGGAGGCGAAGA
GCCAACCAGCACCTCTTCGACAGGGAGCAA
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