mRNA_Ecto-sp8_S_contig9295.30742.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9295.30742.1
Unique NamemRNA_Ecto-sp8_S_contig9295.30742.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9295.30742.1 vs. uniprot
Match: D7G4N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N7_ECTSI)

HSP 1 Score: 695 bits (1794), Expect = 4.020e-234
Identity = 702/1041 (67.44%), Postives = 710/1041 (68.20%), Query Frame = 1
Query:   40 MPKLDKNGKKVARRGERRSERRGSGDSRRSGDQRGRSGSTRRRPDDGGVGDGXXXXT-VSSSGSEGDIGNPSREGVTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSTPAREREGRATSGGGVDGSSRGSRSSAPSGNSSDDGKGADXXXXXXXXXXXSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKXSGGSASXXXXXXXXXXXX-----AGGKHNMSSLMASLMVAPLSRPIPTESIGYLYGENGEDSHSSTPQXXXXXXXXXXXXXXXXKSKRRGLEAGGSSPRHGYDNSNSRSSRNDNLSEDPAAAMVAYGGSGALDVSGGQSSRHRRDXXXXXXXXXXXXXXXXXXXXXXXASPRREGTRVKDHERQHSSTAVSDLDRSTSKGRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVLSPAGDAAAATVAAEGGLVPEWEWPPEGAGAPVASPRTELDAGGDVAVGXXXXXXXXXXXXXXXPPAVLEAAAVGDVSPAEPSPEXXXXXPQVTPEKVAIIPAGRVASMAASTNKKVREGSKNTYAREKAVAAAEAQEEXXXXGGVGAGDTGG--SADRKARAAAMQSGTIVAAQAAAKSATALWLQREAELKAKDAVAAKVARXXXXXXXXXXVKALDRAKAAAAQVAASVSPSPSPPIVXXXXXXXXXXVGSARKSYLXXXXXXXXXXXXXXXXXTADTAPRGADTPSAKSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAAEEKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAAAKERRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAARGSRXXXXXXXXXXXXXXXXXXXXXXXXXXRGASENDEPRVLYRRERGDSSESAEMLSXXXXXXXXXXXXXXXXXMVPQSSGDDYAETLLAEHAAAVLLEKAGGKQQAFAMHR 3138
            MPKLDKNGKKVARRGE       SGDSRRSGDQRGRSGSTRRRPDDGGV   XXXX  VSSSGSEGDIGNPSREGVTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSTPAREREGRATSGGGVDGSSRGSRSSAPSGNSSDDGKGA    XXXXXXXX   XXXXXXXX                         SK +G    XXXXXXXXXXXX     AGGK NMSSLM+SLMVAPLSRPIPTESIGYLYGENGEDSHSSTPQXXXXXXXXXXXXXXX +SKRRGLEAGG+SPRHGYDNSNSRSSRNDN SEDPAAAMVAYGGSG+LDVSGGQSSRHRR XXXXXXXXXXXXXXXXXXXXXXX SPRREGTRVKDHER+HSSTAVSDLDRSTSKGRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VLSPAG+AAAA VAAEGGLVPEWEWPPEGAGAPVASPRTELDAGGDVAVG  XXXXXX       PPA+LEAAAVGDVSPAEPSPE      QVTPEKVAIIP GRVASMAASTNKKVREGSKNTYAREKAVAAAE    XXXX            SADRKARAAAMQSGTIVAAQAAAKSA ALWLQREAELKAKDAVAAKVA XXXXXXXXXX KALDRAKAAAAQ                                                                                                                                                                                                                                  RGASENDEPRVLYRRERGDSSESAEMLS    XXXXXXXXXXX  MVPQSSGDDYAETLLAEHAAAVLLEKAGGKQQAFAMHR
Sbjct:    1 MPKLDKNGKKVARRGEXXXXXXXSGDSRRSGDQRGRSGSTRRRPDDGGVXXXXXXXXXVSSSGSEGDIGNPSREGVTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSTPAREREGRATSGGGVDGSSRGSRSSAPSGNSSDDGKGA----XXXXXXXXXXXXXXXXXXXGRRETKSRSDRRQPAQSSSGTPSRESKKNGXXXXXXXXXXXXXXXXXXXXGAGGKQNMSSLMSSLMVAPLSRPIPTESIGYLYGENGEDSHSSTPQXXXXXXXXXXXXXXXERSKRRGLEAGGASPRHGYDNSNSRSSRNDNPSEDPAAAMVAYGGSGSLDVSGGQSSRHRRXXXXXXXXXXXXXXXXXXXXXXXX-SPRREGTRVKDHERRHSSTAVSDLDRSTSKGRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VLSPAGEAAAAIVAAEGGLVPEWEWPPEGAGAPVASPRTELDAGGDVAVGGGXXXXXXGTGAQQQPPAMLEAAAVGDVSPAEPSPEPSPAPRQVTPEKVAIIPTGRVASMAASTNKKVREGSKNTYAREKAVAAAEXXXXXXXXXXXXXXXXXXXXSADRKARAAAMQSGTIVAAQAAAKSAAALWLQREAELKAKDAVAAKVAXXXXXXXXXXXXKALDRAKAAAAQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDGRGASENDEPRVLYRRERGDSSESAEMLSEEVEXXXXXXXXXXXERMVPQSSGDDYAETLLAEHAAAVLLEKAGGKQQAFAMHR 809          
BLAST of mRNA_Ecto-sp8_S_contig9295.30742.1 vs. uniprot
Match: A0A6H5KD68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD68_9PHAE)

HSP 1 Score: 539 bits (1389), Expect = 4.590e-164
Identity = 707/1038 (68.11%), Postives = 719/1038 (69.27%), Query Frame = 1
Query:   40 MPKLDKNGKKVARRGERRSERRGSGDSRRSGDQRGRSGSTRRRPDD--GGVGDGXXXXTVSSSGSEGDIGNPSREGVTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSTPAREREGRATSGGGVDGSSRGSRSSAPSGNSSDDGKGADXXXXXXXXXXXSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKXSGGSASXXXXXXXXXXXXAGGKHNMSSLMASLMV-APLSRPIPTESIGYLYGENGEDSHSSTPQXXXXXXXXXXXXXXXXKSKRRGLEAGGSSPRHGYDNSNSRSSRNDNLSEDPAAAMVAYGGSGALDVSGGQSSRHRRDXXXXXXXXXXXXXXXXXXXXXXXASPRREGTRVKDHERQHSSTAVSDLDRSTSKGRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVLSPAGDAAAATVAAEGGLVPEWEWPPEGAGAPVASPRTELDAGGDVAVGXXXXXXXXXXXXXXXPPAVLEAAAVGDVSPAEPSPEXXXXXPQVTPEKVAIIPAGRVASMAASTNKKVREGSKNTYAREKAVAAAEAQEEXXXXGGVGAGDTGGSADRKARAAAMQSGTIVAAQAAAKSATALWLQREAELKAKDAVAAKVARXXXXXXXXXXVKALDRAKAAAAQVAASVSPSPSPPIVXXXXXXXXXX--VGSARKSYLXXXXXXXXXXXXXXXXXTADTAPRGADTPSAKSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAAEEKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAAAKERRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAARGSRXXXXXXXXXXXXXXXXXXXXXXXXXXRGASENDEPRVLYRRERGDSSESAEMLSXXXXXXXXXXXXXXXXXMVPQSSGDDYAETLLAEHAAAVLLEKAGGKQQAFAMHR 3138
            MPKLDKNG KVARRGE       SG +RRSGD RGRSGSTRRR DD  G     XXXX  SSSGSEGDIGNPSRE VTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHS                                        XXXXXXXXXXX   XXXXX                            SK S GSA XXXXXXXXXXXXAGGKHNMSSLMASLMV APLSRPIPTESIGYLYGE+G DSHSSTPQXXXXXXXXXXXXX   +SKRRGLEAGGS PRHGYDNSNSRSSRNDNLSEDP AA+VAYGGSGALDVSGGQSSRHRRD     XXXXXXXXXXXXXX    ASPRREGTRVKDHERQHSSTAVSDLDRSTSKGRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSPAGDAA      EGG+VPEWEW PEGAGAPV SPRTELDAG      XXXXX          PPA+ EAAA GDV+PAEPS E      Q TPEKVAIIPAGRVASMAASTNKKVREGS NTYAREKAVA       XXXX                                  SA ALWLQREAELKAKDA AAKVA XXXXXXX   V+ALDRAKAAA  VA            XXXXXXXXXX  VGSARKS L XXXXXXXXXXXXXXXX+ADTAPRGADTPSAK+ E        XXXXXXXXXXXXXX                     XXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXKAA AK+RRLA   XXXXXX                      EAARGSR                          R + ENDEPRVLYRRERGDSSESAEMLS XXXXXXXXXXXXXXXX         YAETLLAEHAAAVLLEKAGGKQQ F MHR
Sbjct:    1 MPKLDKNGNKVARRGEXXXXXXXSGGTRRSGDPRGRSGSTRRRHDDEGGXXXXXXXXXXXSSSGSEGDIGNPSREVVTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETKSRSDRRQPAPSSSGTPSRESKKNVSKKSAGSAXXXXXXXXXXXXXAGGKHNMSSLMASLMVVAPLSRPIPTESIGYLYGEDGMDSHSSTPQXXXXXXXXXXXXXRSERSKRRGLEAGGSPPRHGYDNSNSRSSRNDNLSEDPLAAVVAYGGSGALDVSGGQSSRHRRDERSGSXXXXXXXXXXXXXX----ASPRREGTRVKDHERQHSSTAVSDLDRSTSKGRSARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--LSPAGDAA------EGGVVPEWEWRPEGAGAPVTSPRTELDAGXXXXX-XXXXXVTGGTGAQQQPPAMSEAAAAGDVAPAEPSTEPSPAPRQFTPEKVAIIPAGRVASMAASTNKKVREGSNNTYAREKAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAALWLQREAELKAKDAAAAKVAXXXXXXXXQETVRALDRAKAAAXXVAXXXXXXXXXXXXXXXXXXXXXXXSVGSARKSNLAXXXXXXXXXXXXXXXXSADTAPRGADTPSAKNGEAEKSRATEXXXXXXXXXXXXXXGREHSRVEAMERKEARERSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAATAKDRRLAEEAXXXXXXREAG------------------EAARGSRRRREEGRSSSSMWLAGREDPQDDG--RESLENDEPRVLYRRERGDSSESAEMLSEXXXXXXXXXXXXXXXXXXXXXXX--YAETLLAEHAAAVLLEKAGGKQQTFVMHR 990          
BLAST of mRNA_Ecto-sp8_S_contig9295.30742.1 vs. uniprot
Match: A0A6H5KVR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.270e-13
Identity = 75/163 (46.01%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 1729 PPAVLEAAAVGDVSPAEPSPEXXXXXPQVTPEKVAIIPAGRVASMAASTNKKVREGSKNTYAREKA-VAAAEAQEEXXXXGGVGAGDTGGSADRKARAAAMQSGTIVAAQAAAKSATALWLQREAELKAKDAVAAKVARXXXXXXXXXXVKALDRAKAAAAQV 2214
            PPAV  A  V   SP EPSP       Q  P+++ I PAGRVAS+AASTNKKVREG KNT+  +KA V +A  +E       +   D   +    A+  A+QS T+V AQAAA++A A+W QREAE KAK A      R           KALDRAKA  A++
Sbjct:  177 PPAVASAPVV---SPLEPSPHPSPS--QANPDELGI-PAGRVASLAASTNKKVREGMKNTFGTKKANVLSATVEETNENEWKL---DLAENKAVVAKNQALQSHTLVLAQAAAQTAAAVWAQREAESKAKHAXXXXATRQEAEARMLEAEKALDRAKAMPAEM 330          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9295.30742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4N7_ECTSI4.020e-23467.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD68_9PHAE4.590e-16468.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVR2_9PHAE1.270e-1346.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9295contigEcto-sp8_S_contig9295:1490..5273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size3153
Hectar predicted targeting categoryother localisation
Exons2
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-17_001850.1
Cds size3153
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145283.9532385-CDS-Ecto-sp8_S_contig9295:1489..25091681145283.9532385-CDS-Ecto-sp8_S_contig9295:1489..2509Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9295 1490..2509 -
1681145283.970112-CDS-Ecto-sp8_S_contig9295:3140..52731681145283.970112-CDS-Ecto-sp8_S_contig9295:3140..5273Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9295 3141..5273 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9295.30742.1prot_Ecto-sp8_S_contig9295.30742.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9295 1490..5273 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9295.30742.1

>prot_Ecto-sp8_S_contig9295.30742.1 ID=prot_Ecto-sp8_S_contig9295.30742.1|Name=mRNA_Ecto-sp8_S_contig9295.30742.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1051bp
RAGGTSHQIRTGAMPKLDKNGKKVARRGERRSERRGSGDSRRSGDQRGRS
GSTRRRPDDGGVGDGGGGGTVSSSGSEGDIGNPSREGVTPARSRRSSRSL
SGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSTPAREREGRA
TSGGGVDGSSRGSRSSAPSGNSSDDGKGADGGGDGRGDGTTSRRGPDGRR
ETKSRSDRRQSAPSSSGTPSREGKKNRSKKSGGSASGSTKGGSSSAGGAG
GKHNMSSLMASLMVAPLSRPIPTESIGYLYGENGEDSHSSTPQPSPSPPP
VPPAPSRSEKSKRRGLEAGGSSPRHGYDNSNSRSSRNDNLSEDPAAAMVA
YGGSGALDVSGGQSSRHRRDKQSGSAAPPPESPSASAAVAAASASPRREG
TRVKDHERQHSSTAVSDLDRSTSKGRSARRAAAANAAAAAAAAALDEEEA
EAAAAAEAAAAAAAAAAAAASSSASSSSSFVTKKSAAEPSSRRGSATAVD
SKGQQSSSSGRVLSPAGDAAAATVAAEGGLVPEWEWPPEGAGAPVASPRT
ELDAGGDVAVGGGGGDITGGTGAQQQPPAVLEAAAVGDVSPAEPSPEPSP
APPQVTPEKVAIIPAGRVASMAASTNKKVREGSKNTYAREKAVAAAEAQE
EEGEEGGVGAGDTGGSADRKARAAAMQSGTIVAAQAAAKSATALWLQREA
ELKAKDAVAAKVARREADVKAHEAVKALDRAKAAAAQVAASVSPSPSPPI
VAAGGGGGSGSVGSARKSYLAAAAASSSSSTAAAPPPTADTAPRGADTPS
AKSSEAEKSRAAEAEAAAAAADAAAAADAAAAAGRERSRIEAMERKEARE
RSRAAEEKRQQQQQLDARREEEEKARLRQEKEEARAAAKAAAAKERRLAE
EARAADEAREAEERRLAEEARAADEAREAEEAARGSRRRREEGPSSSSSM
WLAGGGGDPQEDGRGASENDEPRVLYRRERGDSSESAEMLSEEVEEEEDE
DEDEDEERMVPQSSGDDYAETLLAEHAAAVLLEKAGGKQQAFAMHRVSTA
*
back to top

mRNA from alignment at Ecto-sp8_S_contig9295:1490..5273-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9295.30742.1 ID=mRNA_Ecto-sp8_S_contig9295.30742.1|Name=mRNA_Ecto-sp8_S_contig9295.30742.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3784bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9295:1490..5273- (Ectocarpus species8 EcLAC_412)
AGGGCCGGAGGAACTTCGCACCAGATTCGGACGGGGGCCATGCCGAAGCT GGACAAGAACGGCAAGAAGGTGGCCCGGCGGGGCGAGCGGCGGAGCGAGC GACGGGGCAGCGGTGATAGCCGGCGTAGCGGTGACCAGCGCGGCAGGAGC GGAAGCACGCGCCGCCGGCCTGACGACGGGGGGGTGGGCGACGGCGGCGG CGGCGGCACCGTTTCGAGCTCCGGGTCCGAGGGAGACATCGGGAATCCGA GCCGCGAGGGAGTGACTCCGGCGAGGTCCCGCCGCTCTTCGAGGAGTCTA TCGGGCACGACTCCGGCGAGACATCGGTCGTCTCGGAGCATCACCAGCAT CGGCAGCGGGGGGACCGCGGGGGGGCGCGCGCCGCCCTTGCCGCGGGGGA CCGCCAGGGATAGGCACTCGACCCCGGCGAGGGAGAGGGAGGGCCGCGCG ACGAGCGGAGGAGGCGTCGACGGGTCTTCCCGCGGCTCGCGGTCCTCCGC GCCTTCCGGGAACAGCAGCGACGACGGCAAGGGGGCGGACGGCGGCGGCG ACGGGCGTGGGGACGGCACCACGAGCAGACGGGGCCCCGACGGGCGGCGG GAGACGAAGTCGCGGTCTGATCGGCGGCAATCCGCGCCGTCGTCTTCCGG TACCCCGAGCAGGGAGGGCAAGAAGAACCGGTCCAAGAAGTCGGGCGGGA GCGCGAGTGGGAGCACGAAGGGGGGGAGCAGCAGCGCCGGCGGCGCCGGC GGGAAGCACAACATGTCCAGCCTGATGGCCAGCCTGATGGTCGCGCCTCT CTCGCGGCCCATCCCGACGGAGTCGATCGGCTACCTCTATGGAGAGAACG GAGAGGACTCTCACTCGTCAACACCTCAACCCTCGCCGTCCCCACCCCCG GTCCCGCCGGCACCGTCTCGCTCGGAAAAATCGAAGCGAAGGGGGCTGGA GGCCGGGGGGTCTTCGCCTCGACACGGGTACGATAACAGCAACTCGCGGT CGTCTCGCAACGACAATCTTTCTGAAGATCCGGCGGCGGCGATGGTAGCC TACGGCGGCAGCGGCGCCCTCGACGTCTCGGGCGGTCAGTCCTCACGACA TCGTCGGGACAAGCAGAGCGGGTCAGCAGCTCCGCCACCGGAGTCACCAT CTGCATCGGCGGCGGTGGCAGCAGCATCAGCATCGCCCCGCAGGGAAGGG ACGAGGGTCAAGGACCACGAGAGGCAGCACTCGAGCACGGCCGTCAGCGA CCTGGACAGGTCGACGTCCAAGGGTAGGTCGGCTCGCCGAGCAGCAGCGG CGAATGCGGCGGCGGCGGCGGCAGCGGCGGCGCTCGACGAAGAGGAGGCC GAGGCTGCCGCAGCGGCGGAGGCTGCGGCAGCGGCGGCAGCGGCGGCGGC GGCGGCAGCCTCCTCCTCCGCCTCCTCCTCCTCCTCCTTCGTCACCAAGA AGTCGGCAGCAGAGCCGTCGTCTAGGCGCGGCAGCGCCACCGCCGTGGAC AGCAAGGGCCAGCAGTCGTCGTCTTCCGGACGAGTGCTGTCTCCTGCTGG CGACGCCGCCGCCGCCACCGTCGCCGCCGAAGGCGGCCTCGTACCGGAGT GGGAGTGGCCTCCCGAGGGCGCGGGCGCGCCTGTGGCTTCGCCGAGGACG GAGCTTGACGCTGGCGGCGACGTTGCCGTTGGCGGCGGCGGCGGCGACAT CACCGGCGGCACGGGGGCGCAACAACAACCACCAGCAGTATTGGAGGCCG CTGCTGTGGGCGACGTTTCTCCTGCGGAGCCCTCCCCCGAGCCGTCTCCC GCTCCGCCACAGGTTACTCCCGAGAAGGTTGCGATCATCCCCGCCGGGAG GGTGGCCAGCATGGCGGCCAGCACCAACAAGAAGGTGCGGGAGGGCAGCA AGAACACGTACGCGAGAGAGAAGGCGGTCGCCGCCGCCGAGGCGCAGGAG GAGGAGGGGGAGGAGGGGGGGGTGGGGGCGGGCGACACCGGGGGCTCCGC GGACAGGAAGGCGCGTGCGGCCGCCATGCAGTCGGGCACGATCGTGGCGG CGCAGGCGGCGGCGAAGTCGGCGACGGCGCTGTGGTTGCAGCGAGAGGCC GAGTTGAAGGCCAAGGACGCAGTGGCGGCGAAGGTGGGTGTGATGTAACT TCTGTGCGCGTCATTCTGTGATGTTGCGTGTTACGTTTGTTTGTTGTCAG TGGGCGGAAATGCGCCACAGGGAGCGTCACAGTTTTTTTCACGCGTTCGT AGGAGAGGACTGGGGTCGGACGAGGTCATCGCTGCTTTACCTGAATCGGT TGGGCTGCTTGTCGACAAGCTTCGATTAGAGGCTGGCGGGCGGTGTTTCT TGTGAAGGAACAGAACGTTGAAGGAGGAAACAAGCTGTCGTTGGGAGGGA CTCTCGTTTGGCGGCGGTAGTGGTACCGGCAGCGGTACTTGTAGTCATGT GCACAGCAAAGGAAGGCCTCCGATGTACATGCAACCGCACCTTGGAAAGG GCGAAGCGTGAAACCGCGTTAGCTCTGCATGGGTGGGGGTTGATGCTGCT GTTGTTGTTGCTGCTGCTCTGCTGCTGCTGCTGCCGCCGTGCCGCCGTGC CGCCGTGCCGCCGCGTTTTATTTATTTCGTGCTGAGTGCGGCGTCGACTT GTCAACGGAGGAACCTTGATCCATGCACCTGTACCTCTAAGCTTCGGCTG TTTCGCTGAAGTAGTATTTTTTTTGCCTCATGAGTGCCGTTAATTTTCGT TGTCCTGAGCGCAGGTGGCTCGACGAGAGGCAGACGTCAAGGCCCACGAG GCAGTCAAAGCCTTGGACAGAGCCAAGGCGGCGGCAGCCCAGGTGGCGGC GTCGGTGTCGCCGTCGCCGTCGCCGCCGATCGTCGCAGCGGGCGGCGGCG GCGGCAGCGGCAGCGTTGGTTCCGCTCGAAAGAGCTACCTTGCTGCAGCA GCGGCATCGTCATCGTCATCGACGGCGGCGGCGCCTCCACCAACAGCAGA CACCGCGCCCCGCGGCGCCGATACCCCATCGGCAAAGAGCAGCGAGGCAG AGAAATCGCGGGCGGCAGAAGCCGAAGCTGCTGCTGCAGCGGCGGATGCA GCGGCGGCGGCGGATGCTGCGGCGGCGGCGGGTCGGGAACGCAGCAGGAT CGAAGCGATGGAAAGGAAAGAGGCAAGAGAAAGGTCCCGCGCCGCCGAGG AAAAGCGGCAGCAGCAGCAGCAGCTGGACGCGAGGAGGGAGGAGGAGGAA AAGGCGAGGCTACGGCAAGAGAAGGAGGAGGCGAGAGCGGCGGCGAAGGC GGCAGCGGCGAAGGAGAGGAGGCTAGCGGAGGAGGCCAGAGCGGCCGACG AGGCCCGGGAGGCGGAGGAGAGGAGGCTAGCGGAGGAGGCCAGAGCGGCG GACGAGGCCCGGGAGGCGGAGGAGGCCGCTCGCGGTTCCAGGCGCAGAAG AGAGGAGGGCCCGTCGTCCTCCTCCTCCATGTGGTTGGCCGGGGGAGGCG GGGATCCGCAGGAAGATGGAAGGGGGGCGTCGGAGAACGACGAGCCGCGG GTGCTGTACCGGAGGGAAAGGGGAGATAGCTCGGAGTCCGCCGAGATGCT GTCCGAGGAGGTGGAGGAGGAAGAGGATGAGGATGAGGACGAGGATGAGG AGAGGATGGTGCCGCAATCGAGCGGAGACGACTACGCGGAGACGCTCCTG GCGGAGCACGCGGCGGCGGTGTTGCTCGAGAAGGCCGGGGGGAAGCAACA GGCCTTCGCCATGCACAGGGTAAGCACAGCCTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9295:1490..5273-

>mRNA_Ecto-sp8_S_contig9295.30742.1 ID=mRNA_Ecto-sp8_S_contig9295.30742.1|Name=mRNA_Ecto-sp8_S_contig9295.30742.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=3153bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9295:1490..5273- (Ectocarpus species8 EcLAC_412)
AGGGCCGGAGGAACTTCGCACCAGATTCGGACGGGGGCCATGCCGAAGCT
GGACAAGAACGGCAAGAAGGTGGCCCGGCGGGGCGAGCGGCGGAGCGAGC
GACGGGGCAGCGGTGATAGCCGGCGTAGCGGTGACCAGCGCGGCAGGAGC
GGAAGCACGCGCCGCCGGCCTGACGACGGGGGGGTGGGCGACGGCGGCGG
CGGCGGCACCGTTTCGAGCTCCGGGTCCGAGGGAGACATCGGGAATCCGA
GCCGCGAGGGAGTGACTCCGGCGAGGTCCCGCCGCTCTTCGAGGAGTCTA
TCGGGCACGACTCCGGCGAGACATCGGTCGTCTCGGAGCATCACCAGCAT
CGGCAGCGGGGGGACCGCGGGGGGGCGCGCGCCGCCCTTGCCGCGGGGGA
CCGCCAGGGATAGGCACTCGACCCCGGCGAGGGAGAGGGAGGGCCGCGCG
ACGAGCGGAGGAGGCGTCGACGGGTCTTCCCGCGGCTCGCGGTCCTCCGC
GCCTTCCGGGAACAGCAGCGACGACGGCAAGGGGGCGGACGGCGGCGGCG
ACGGGCGTGGGGACGGCACCACGAGCAGACGGGGCCCCGACGGGCGGCGG
GAGACGAAGTCGCGGTCTGATCGGCGGCAATCCGCGCCGTCGTCTTCCGG
TACCCCGAGCAGGGAGGGCAAGAAGAACCGGTCCAAGAAGTCGGGCGGGA
GCGCGAGTGGGAGCACGAAGGGGGGGAGCAGCAGCGCCGGCGGCGCCGGC
GGGAAGCACAACATGTCCAGCCTGATGGCCAGCCTGATGGTCGCGCCTCT
CTCGCGGCCCATCCCGACGGAGTCGATCGGCTACCTCTATGGAGAGAACG
GAGAGGACTCTCACTCGTCAACACCTCAACCCTCGCCGTCCCCACCCCCG
GTCCCGCCGGCACCGTCTCGCTCGGAAAAATCGAAGCGAAGGGGGCTGGA
GGCCGGGGGGTCTTCGCCTCGACACGGGTACGATAACAGCAACTCGCGGT
CGTCTCGCAACGACAATCTTTCTGAAGATCCGGCGGCGGCGATGGTAGCC
TACGGCGGCAGCGGCGCCCTCGACGTCTCGGGCGGTCAGTCCTCACGACA
TCGTCGGGACAAGCAGAGCGGGTCAGCAGCTCCGCCACCGGAGTCACCAT
CTGCATCGGCGGCGGTGGCAGCAGCATCAGCATCGCCCCGCAGGGAAGGG
ACGAGGGTCAAGGACCACGAGAGGCAGCACTCGAGCACGGCCGTCAGCGA
CCTGGACAGGTCGACGTCCAAGGGTAGGTCGGCTCGCCGAGCAGCAGCGG
CGAATGCGGCGGCGGCGGCGGCAGCGGCGGCGCTCGACGAAGAGGAGGCC
GAGGCTGCCGCAGCGGCGGAGGCTGCGGCAGCGGCGGCAGCGGCGGCGGC
GGCGGCAGCCTCCTCCTCCGCCTCCTCCTCCTCCTCCTTCGTCACCAAGA
AGTCGGCAGCAGAGCCGTCGTCTAGGCGCGGCAGCGCCACCGCCGTGGAC
AGCAAGGGCCAGCAGTCGTCGTCTTCCGGACGAGTGCTGTCTCCTGCTGG
CGACGCCGCCGCCGCCACCGTCGCCGCCGAAGGCGGCCTCGTACCGGAGT
GGGAGTGGCCTCCCGAGGGCGCGGGCGCGCCTGTGGCTTCGCCGAGGACG
GAGCTTGACGCTGGCGGCGACGTTGCCGTTGGCGGCGGCGGCGGCGACAT
CACCGGCGGCACGGGGGCGCAACAACAACCACCAGCAGTATTGGAGGCCG
CTGCTGTGGGCGACGTTTCTCCTGCGGAGCCCTCCCCCGAGCCGTCTCCC
GCTCCGCCACAGGTTACTCCCGAGAAGGTTGCGATCATCCCCGCCGGGAG
GGTGGCCAGCATGGCGGCCAGCACCAACAAGAAGGTGCGGGAGGGCAGCA
AGAACACGTACGCGAGAGAGAAGGCGGTCGCCGCCGCCGAGGCGCAGGAG
GAGGAGGGGGAGGAGGGGGGGGTGGGGGCGGGCGACACCGGGGGCTCCGC
GGACAGGAAGGCGCGTGCGGCCGCCATGCAGTCGGGCACGATCGTGGCGG
CGCAGGCGGCGGCGAAGTCGGCGACGGCGCTGTGGTTGCAGCGAGAGGCC
GAGTTGAAGGCCAAGGACGCAGTGGCGGCGAAGGTGGCTCGACGAGAGGC
AGACGTCAAGGCCCACGAGGCAGTCAAAGCCTTGGACAGAGCCAAGGCGG
CGGCAGCCCAGGTGGCGGCGTCGGTGTCGCCGTCGCCGTCGCCGCCGATC
GTCGCAGCGGGCGGCGGCGGCGGCAGCGGCAGCGTTGGTTCCGCTCGAAA
GAGCTACCTTGCTGCAGCAGCGGCATCGTCATCGTCATCGACGGCGGCGG
CGCCTCCACCAACAGCAGACACCGCGCCCCGCGGCGCCGATACCCCATCG
GCAAAGAGCAGCGAGGCAGAGAAATCGCGGGCGGCAGAAGCCGAAGCTGC
TGCTGCAGCGGCGGATGCAGCGGCGGCGGCGGATGCTGCGGCGGCGGCGG
GTCGGGAACGCAGCAGGATCGAAGCGATGGAAAGGAAAGAGGCAAGAGAA
AGGTCCCGCGCCGCCGAGGAAAAGCGGCAGCAGCAGCAGCAGCTGGACGC
GAGGAGGGAGGAGGAGGAAAAGGCGAGGCTACGGCAAGAGAAGGAGGAGG
CGAGAGCGGCGGCGAAGGCGGCAGCGGCGAAGGAGAGGAGGCTAGCGGAG
GAGGCCAGAGCGGCCGACGAGGCCCGGGAGGCGGAGGAGAGGAGGCTAGC
GGAGGAGGCCAGAGCGGCGGACGAGGCCCGGGAGGCGGAGGAGGCCGCTC
GCGGTTCCAGGCGCAGAAGAGAGGAGGGCCCGTCGTCCTCCTCCTCCATG
TGGTTGGCCGGGGGAGGCGGGGATCCGCAGGAAGATGGAAGGGGGGCGTC
GGAGAACGACGAGCCGCGGGTGCTGTACCGGAGGGAAAGGGGAGATAGCT
CGGAGTCCGCCGAGATGCTGTCCGAGGAGGTGGAGGAGGAAGAGGATGAG
GATGAGGACGAGGATGAGGAGAGGATGGTGCCGCAATCGAGCGGAGACGA
CTACGCGGAGACGCTCCTGGCGGAGCACGCGGCGGCGGTGTTGCTCGAGA
AGGCCGGGGGGAAGCAACAGGCCTTCGCCATGCACAGGGTAAGCACAGCC
TAG
back to top