mRNA_Ecto-sp8_S_contig9285.30724.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: D7G899_ECTSI (UBA/TS-N domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G899_ECTSI) HSP 1 Score: 374 bits (961), Expect = 5.450e-118 Identity = 181/189 (95.77%), Postives = 186/189 (98.41%), Query Frame = 3
Query: 3 NRAHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINPRAGHAGGILASCLSINVRT 569
NRAHLRPLR+WELIPEIPCQKQFTLVTGTAEREARFQ LKREAALLSGG TGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLS+SLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINP+ GHAGGILASCL+I+VRT
Sbjct: 637 NRAHLRPLREWELIPEIPCQKQFTLVTGTAEREARFQVLKREAALLSGGETGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSISLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINPKPGHAGGILASCLTIHVRT 825
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A6H5JD35_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD35_9PHAE) HSP 1 Score: 374 bits (959), Expect = 5.130e-117 Identity = 181/189 (95.77%), Postives = 186/189 (98.41%), Query Frame = 3
Query: 3 NRAHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINPRAGHAGGILASCLSINVRT 569
NRAHLRPLR+WELIPEIPCQKQFTLVTGTAEREARFQALKREAALLS GGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGG+CSGHWPNAERVGGQNPVIVA+CEVIDRESYK RGRNAGYYVVPDEECVATRFLLINPRAG+ GGILASCL+INVRT
Sbjct: 704 NRAHLRPLREWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSRGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGTCSGHWPNAERVGGQNPVIVAVCEVIDRESYKIRGRNAGYYVVPDEECVATRFLLINPRAGYGGGILASCLTINVRT 892
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: D7FUS3_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS3_ECTSI) HSP 1 Score: 209 bits (532), Expect = 1.590e-55 Identity = 113/173 (65.32%), Postives = 130/173 (75.14%), Query Frame = 3
Query: 3 NRAHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAG-GRGGSCSG-HWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINPR 515
NRAHLRPLR E+IPEIPC+KQF LVTGTAEREA+FQ +KR A GG+GTGSFYAFHGS P NWHGIL GL+NMSG+++ S GAA G GIYMA L VSL YAG G G SG HWP + G + VIVA+CEVID+E + + YYVVPDEECVATR+LLINP+
Sbjct: 750 NRAHLRPLRGSEVIPEIPCEKQFMLVTGTAEREAKFQTMKRIAGSRRSGGSGTGSFYAFHGSKPDNWHGILHMGLRNMSGTKYQSYGAAYGKGIYMAEALGVSLKYAGMGSNGEGSGNHWPLSSIDG--SAVIVAVCEVIDKEECR-QAHGPKYYVVPDEECVATRYLLINPK 919
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A6H5JHW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW3_9PHAE) HSP 1 Score: 150 bits (379), Expect = 1.860e-35 Identity = 92/167 (55.09%), Postives = 108/167 (64.67%), Query Frame = 3
Query: 6 RAHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSG-----------------------SRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKT 437
RAHLRPLR+ E+I EIPC KQF LVTGTAEREA FQ +K+EAA S G TG SF+AFHGS P NWH ILQ GLKNMSG S++MS+GAA G+G+YMA++LSVSL YA G + HWP E G VIVA+CEV+DR+ T
Sbjct: 529 RAHLRPLREEEIIREIPCAKQFMLVTGTAEREANFQRMKKEAA--SNGRTG--SFFAFHGSKPDNWHAILQLGLKNMSGIYDPSCHQNDCWLESGSGGLPKSSKYMSSGAAYGTGVYMADKLSVSLRYAASDG---TEHWPLGETSG--MAVIVAVCEVVDRQGTAT 686
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A7S2FMF6_9STRA (Poly [ADP-ribose] polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FMF6_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.170e-30 Identity = 78/182 (42.86%), Postives = 104/182 (57.14%), Query Frame = 3
Query: 3 NRAHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQNPVI-VAICEVIDRES----YKTRG-------RNAGYYVVPDEECVATRFLLINP 512
NRAHLRPL E E+ + QF L++ ERE FQ +K + GS +A+HGSG GNWH IL+ LKNMSG++ MSTG G+GIY A+ S SLGY G + W N++ + P+ +A+CE+I+RE Y +G + G YVVP EE V TRFL++NP
Sbjct: 7 NRAHLRPLEPHERFDEVGTEHQFVLMSAPVEREVAFQEMKSVS----------GSIFAWHGSGAGNWHVILRTSLKNMSGTKHMSTGQVYGAGIYFASNSSTSLGYCG---KTRPVSWKNSKHF--KLPMTCLALCEIINREKEFTYYPGKGAAKGKKMNDQGIYVVPQEEYVMTRFLIVNP 173
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: D7FUS7_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS7_ECTSI) HSP 1 Score: 131 bits (330), Expect = 2.270e-29 Identity = 96/247 (38.87%), Postives = 113/247 (45.75%), Query Frame = 3
Query: 9 AHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGY------------------------------------------------------------------------------AGGRGGSCSGHWPNAERVGG-QNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINP 512
HL L++ E I + C+KQF L T T+ RE FQA+KREAA S GTGSF+AFHGS PGNWHGIL+ G+KNMSGS +MS G+ G GIYM L SL Y +GGRGG G+ N V + P IVA+CEVIDR YK RN V+PDE CVATRFLLI+P
Sbjct: 307 GHLHLLKEAEAIQGVSCKKQFVL-TDTSAREECFQAMKREAAASS---NGTGSFFAFHGSAPGNWHGILRLGIKNMSGSEYMSNGSVCGKGIYMGRTLGASLSYTLEVRRPVVRIAATPATAARPKATNRGIVAAISRAASRVFGRATTKASRAAASXXXXNATGAAPAPAFVGSPSTQGAASGGRGGH--GNRLNPPAVNALKAPPIVAVCEVIDRPEYK---RNNRLLVIPDEHCVATRFLLIDP 544
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A7S0QIR1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QIR1_9CRYP) HSP 1 Score: 122 bits (307), Expect = 2.260e-28 Identity = 78/171 (45.61%), Postives = 104/171 (60.82%), Query Frame = 3
Query: 6 RAHLRPLRDWELIPEIP--CQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINP 512
R H+R L E + +P QF +++G+ E EARF+A + A +GG +GSF+A+HGS NWH IL+ GLKNMS + +MSTGAA GSGIY+A L SL YA G GS G W + V G + +A+CEV+D S T + Y VVPDE+ V TR+L + P
Sbjct: 37 RTHIRRLGPEEQVRGVPDGWTHQFVMLSGSPEHEARFRAARAAARAATGG---SGSFHAWHGSPLCNWHSILRLGLKNMSNTEYMSTGAAFGSGIYLARDLGTSLSYAQGYCGSTQG-WEKS--VFGPSHCCLALCEVVDCPSKFTSVKP--YLVVPDEDLVMTRYLFVVP 199
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A6H5JA28_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA28_9PHAE) HSP 1 Score: 125 bits (313), Expect = 9.410e-27 Identity = 93/254 (36.61%), Postives = 111/254 (43.70%), Query Frame = 3
Query: 9 AHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGY--------------------------------------------------------------------------------------AGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINP 512
HL L++ E I + C+KQF L T T+ RE RFQA+KREAA S GTGS +AFHGS PGNWHGIL+ G+KNMSGS++MS G G GIYM+ L SL Y +GGRGG + P A + P IVA+ EVIDR YK RN V+PDE CVA RFLLI+P
Sbjct: 670 GHLHLLKEAEAIEGVSCKKQFVL-TDTSAREERFQAMKREAAASS---NGTGSLFAFHGSAPGNWHGILRLGIKNMSGSKYMSNGLVCGKGIYMSRTLGASLSYTLEVHRPVVRIKPGSTKAFAATPTTAATPKAANRGIGAAISRAASRVFXXXTXXXSDAXXXXXXXXXXXAAAAPAFVGSPSTQGVASGGRGGHGNRLSPPAVNAP-KTPAIVAVYEVIDRPEYK---RNNRLMVIPDEHCVAMRFLLIDP 915
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A0H5QTW3_9EUKA (Poly [ADP-ribose] polymerase (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QTW3_9EUKA) HSP 1 Score: 112 bits (281), Expect = 4.940e-24 Identity = 75/191 (39.27%), Postives = 110/191 (57.59%), Query Frame = 3
Query: 3 NRAHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSF-YAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQNPVIVAICEVIDRESYKTRGRNAGYYVVPDEECVATRFLLINPRAGHA--GGILASCLSINVR 566
NR+H+R L E ++ QF L+T + E+EARFQ+ REA S + +F YAFHGSG GNWH IL++GL NMSG++ GAA GSG+YMA L SL Y+ GGS W N+ + G+ +A+CE+ + + R N Y+VVP+ + + TR+L + A ++AS +++ R
Sbjct: 156 NRSHIRALASSETFSQVLAGHQFVLMTSSPEKEARFQSYVREARKQS-----SNAFEYAFHGSGKGNWHSILRQGLLNMSGTQHQLHGAAYGSGVYMAPDLCTSLAYSKMSGGS---GWKNS--MFGETWQALALCELANTS--RLRKPNP-YWVVPEADTIVTRYLFLFTETEIALQRNVMASSINVPFR 333
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Match: A0A6H5JCJ2_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ2_9PHAE) HSP 1 Score: 116 bits (290), Expect = 6.030e-24 Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = 3
Query: 9 AHLRPLRDWELIPEIPCQKQFTLVTGTAEREARFQALKREAALLSGGGTGTGSFYAFHGSGPGNWHGILQEGLKNMSGSRWMSTGAAMGSGIYMANQLSVSLGY 320
L L++ E I I C+KQF L T T+ERE RFQA+KREAA GTGSF+AFHGS PGNWHGIL+ G+KNMSGS +MS GA G GIYM L+VSL Y
Sbjct: 197 GELHLLKEAEAIQGISCKKQFVL-TDTSEREERFQAMKREAAASL---NGTGSFFAFHGSAPGNWHGILRLGIKNMSGSEYMSNGATSGHGIYMGGSLAVSLSY 296 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9285.30724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9285.30724.1 >prot_Ecto-sp8_S_contig9285.30724.1 ID=prot_Ecto-sp8_S_contig9285.30724.1|Name=mRNA_Ecto-sp8_S_contig9285.30724.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=113bp MSGSRWMSTGAAMGSGIYMANQLSVSLGYAGGRGGSCSGHWPNAERVGGQback to top mRNA from alignment at Ecto-sp8_S_contig9285:11..4798+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9285.30724.1 ID=mRNA_Ecto-sp8_S_contig9285.30724.1|Name=mRNA_Ecto-sp8_S_contig9285.30724.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4788bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9285:11..4798+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9285:11..4798+ >mRNA_Ecto-sp8_S_contig9285.30724.1 ID=mRNA_Ecto-sp8_S_contig9285.30724.1|Name=mRNA_Ecto-sp8_S_contig9285.30724.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=339bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9285:11..4798+ (Ectocarpus species8 EcLAC_412)back to top |