mRNA_Ecto-sp8_S_contig9268.30691.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9268.30691.1
Unique NamemRNA_Ecto-sp8_S_contig9268.30691.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 9.070e-147
Identity = 319/379 (84.17%), Postives = 330/379 (87.07%), Query Frame = 1
Query:    1 RQELEAHAGAITALRQAEDAQDDAWPKLKRAKH----------------ETPPRALPVPPPPHPQTCEDTKERLASLNSQHEILTKHLQNLTEQMEAAQAKRAREDKAVADRVVEQGEGGXXXXXXXXXADREXKEEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEAEQTKAALESAKADLTRGKAAAEKERDDANAIKAKLLPQVHELRKSLSASAAQKVSLS 1089
            RQELEAHAGAITALR AEDAQD +    + A+H                E    AL        +TCEDTKERLASLNSQHEILTKHLQNLTEQMEAAQAKRAREDKAVADRVVE+GEGG XXXXXXXX    X  EKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXX AATESVEAV+KAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQ+APLQRAQRQQSASSASLASEKESLRKEVE+WKKRVT+LTASFNAVDPKDHEDVIAEKERLAKALAEAEQ KAALE+A   LTRGKAAAEKERDDANAIKAKLLPQVHELRKSLSASAAQK + S
Sbjct:  616 RQELEAHAGAITALRHAEDAQDASNKAARDAQHAKDSLAADLIGARARWEAREAAL-------NKTCEDTKERLASLNSQHEILTKHLQNLTEQMEAAQAKRAREDKAVADRVVEEGEGGGXXXXXXXXXXXXXXXEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXRAATESVEAVTKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQMAPLQRAQRQQSASSASLASEKESLRKEVESWKKRVTNLTASFNAVDPKDHEDVIAEKERLAKALAEAEQAKAALENAXXXLTRGKAAAEKERDDANAIKAKLLPQVHELRKSLSASAAQKAATS 987          
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Match: D7FMD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD2_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 5.490e-133
Identity = 271/285 (95.09%), Postives = 277/285 (97.19%), Query Frame = 1
Query:  235 MEAAQAKRAREDKAVADRVVEQGEGGXXXXXXXXXADREXKEEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEAEQTKAALESAKADLTRGKAAAEKERDDANAIKAKLLPQVHELRKSLSASAAQKVSLS 1089
            ME AQAKRAREDKAVADRVVE+GEG XXXXXXXXX  R X EEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQ+APLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEA+QTKAALE+AKADLTRGKAAAEKERDDANAIKAK+LPQVHELRKSLSASAAQK + S
Sbjct:    1 METAQAKRAREDKAVADRVVEEGEGXXXXXXXXXXXXRXXXEEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQMAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEADQTKAALENAKADLTRGKAAAEKERDDANAIKAKVLPQVHELRKSLSASAAQKAAAS 285          
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Match: A0A7S1YNQ1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNQ1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.100e-7
Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  586 KLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAK 903
            KL E  AQ++ + ESN +LR + G  ++     E  L++ +  +AP  +         AS+ +EK+SL +E+E+WK+RV SL A FN VDP+DH+  +A+ + + K
Sbjct: 1185 KLKEAEAQLNVVSESNQLLRVEAGQLKKTVSQLETKLAEAKGAIAPKDKLALHLEGKVASMQAEKDSLSRELESWKRRVESLVAKFNHVDPEDHKKALADAQSMKK 1290          
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Match: A0A8K1CDU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDU5_PYTOL)

HSP 1 Score: 64.3 bits (155), Expect = 1.960e-7
Identity = 56/180 (31.11%), Postives = 87/180 (48.33%), Query Frame = 1
Query:  421 RDVQVVTTDLELSKQ-------RVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEAEQTKAAL 939
            ++ ++ T+ LEL+ Q       +VT +EA                    + S +    ++  K   ++ Q+S LRESN  LR +      R +  E     L  Q+APLQ ++ + +A  ASL  E  +L +  + WK RV  L   +  VDP +HE V AEK+ LAK LA+ +  +AAL
Sbjct: 1180 KESEISTSKLELANQENQRLRAQVTSLEATIARLREDLKQLEGASARLGSSSADYGLLSDETKRSAQLEQLSLLRESNATLRDECQKNLARFKAEEERAKALEGQLAPLQTSESRLTAEVASLKQELAALTEANKRWKSRVEQLVEKYQQVDPAEHEKVCAEKDALAKELADLQTKEAAL 1359          
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Match: A0A662YA30_9STRA (TPR_MLP1_2 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YA30_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.370e-5
Identity = 50/181 (27.62%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  385 VKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXX----AATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAE 915
            + +L  ++ +  R+ ++  + LEL++Q + +  A                       A+    A + +E  K + ++ Q++ LRESN  LR +      + +  E  +  L A++ PL+ A+       AS+  E  +L    + WK+RV  L   +  VDP +H+ VIAEKE LAK LAE
Sbjct: 1193 IDDLRSVIAYLRRESEIAESKLELAQQELQRDRATIFSLESTVERLRGEIKALSAAVASTGKPATTASEDEKRVAQLEQLNLLRESNATLRDESQKNLAKLKEEEEKVRSLEAKLVPLRNAETSLKTQVASMKQEIVTLSDANKRWKQRVDQLVEKYQQVDPAEHDKVIAEKEALAKQLAE 1373          
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Match: A0A448ZKX7_9STRA (TPR_MLP1_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKX7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.210e-5
Identity = 84/327 (25.69%), Postives = 144/327 (44.04%), Query Frame = 1
Query:    7 ELEAHAGAITALRQAEDAQD-------DAWPKLK--RAKHETPPRALPVPPPPHPQTCEDTKERLASLNSQHEILTKHLQNLTEQMEAAQAKRAREDKAVADRVVEQGEGGXXXXXXXXXADREXKEEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSK------AEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEAEQTKAALE 942
            EL  HA A T+LR A +  +       DA  +L    +K++     L V      +  ++   ++ +  +++ +L   L+ + EQ+E  Q++   + +A AD   E   G                EE  RL   V EL ELV+    +   +   L+ +K R T+ E                      ES+E          A+  K  EE +++  L +SN  L+ ++ D E     A+  + + +  + P    Q+Q  +  A L +EK+SL +E+++WK RV SL + FN VDP++H  V+ + E L K +   E+ K+  E
Sbjct: 1084 ELTLHAEARTSLRLAREENEKANRLRNDAIEELAALESKYKIQDSILEVEKTKREEAEKEFTTKMDATRAENTLLHSQLEKINEQVEKMQSRHTLKSEA-ADAEPEDATGD---------------EEMFRLRMTVSELRELVKFVRAEKDSIQLQLDSAK-RSTERERTKAAVARRTVEETQAELDVLRESLENKXNGATDEGADKLKTAEEQSRL--LSDSNAHLQRQVQDLEANLAXAKQEVEESKKALQPSADKQKQLESDKAVLLAEKDSLLREIDDWKGRVQSLVSKFNQVDPEEHLKVVKKSEELEKQVKSLEEKKSYAE 1391          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9268.30691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KRL3_9PHAE9.070e-14784.17TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
D7FMD2_ECTSI5.490e-13395.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1YNQ1_9STRA1.100e-736.79Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A8K1CDU5_PYTOL1.960e-731.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662YA30_9STRA1.370e-527.62TPR_MLP1_2 domain-containing protein n=2 Tax=Notho... [more]
A0A448ZKX7_9STRA3.210e-525.69TPR_MLP1_2 domain-containing protein n=1 Tax=Pseud... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9268contigEcto-sp8_S_contig9268:2..6887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score406.4
Seed ortholog evalue1.4e-110
Seed eggNOG ortholog2880.D7FMD2
Model size1089
KEGG koko:K09291,ko:K10405,ko:K12472,ko:K20283
KEGG TC1.I.1
KEGG Pathwayko03013,ko04144,ko05200,ko05216,map03013,map04144,map05200,map05216
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000278,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005730,GO:0005737,GO:0005829,GO:0005911,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007275,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009506,GO:0009507,GO:0009536,GO:0009791,GO:0009892,GO:0009908,GO:0009909,GO:0009910,GO:0009987,GO:0010467,GO:0010468,GO:0010564,GO:0010605,GO:0010639,GO:0010948,GO:0010965,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016973,GO:0019222,GO:0022402,GO:0022414,GO:0030054,GO:0030071,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031503,GO:0031577,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033233,GO:0033234,GO:0034613,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0046907,GO:0048367,GO:0048437,GO:0048438,GO:0048443,GO:0048466,GO:0048519,GO:0048523,GO:0048580,GO:0048581,GO:0048608,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0051028,GO:0051093,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051641,GO:0051649,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055044,GO:0060255,GO:0060968,GO:0061458,GO:0065007,GO:0070013,GO:0070727,GO:0071166,GO:0071173,GO:0071174,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0090567,GO:0099402,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1903047,GO:1903320,GO:1903321,GO:1905818,GO:1905819,GO:2000026,GO:2000241,GO:2000242,GO:2000816,GO:2001251
Exons8
EggNOG free text desc.spindle assembly checkpoint
EggNOG OGsKOG4674@1,KOG4674@2759
Cds size1089
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9268.30691.1prot_Ecto-sp8_S_contig9268.30691.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9268 2..6887 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145280.152149-CDS-Ecto-sp8_S_contig9268:1..671681145280.152149-CDS-Ecto-sp8_S_contig9268:1..67Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 2..67 +
1681145280.16652-CDS-Ecto-sp8_S_contig9268:1644..18941681145280.16652-CDS-Ecto-sp8_S_contig9268:1644..1894Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 1645..1894 +
1681145280.184302-CDS-Ecto-sp8_S_contig9268:2299..24151681145280.184302-CDS-Ecto-sp8_S_contig9268:2299..2415Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 2300..2415 +
1681145280.20035-CDS-Ecto-sp8_S_contig9268:3631..37381681145280.20035-CDS-Ecto-sp8_S_contig9268:3631..3738Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 3632..3738 +
1681145280.2183695-CDS-Ecto-sp8_S_contig9268:4230..43831681145280.2183695-CDS-Ecto-sp8_S_contig9268:4230..4383Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 4231..4383 +
1681145280.239667-CDS-Ecto-sp8_S_contig9268:5380..55371681145280.239667-CDS-Ecto-sp8_S_contig9268:5380..5537Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 5381..5537 +
1681145280.252776-CDS-Ecto-sp8_S_contig9268:6019..62021681145280.252776-CDS-Ecto-sp8_S_contig9268:6019..6202Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 6020..6202 +
1681145280.275193-CDS-Ecto-sp8_S_contig9268:6830..68871681145280.275193-CDS-Ecto-sp8_S_contig9268:6830..6887Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9268 6831..6887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9268.30691.1

>prot_Ecto-sp8_S_contig9268.30691.1 ID=prot_Ecto-sp8_S_contig9268.30691.1|Name=mRNA_Ecto-sp8_S_contig9268.30691.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=363bp
RQELEAHAGAITALRQAEDAQDDAWPKLKRAKHETPPRALPVPPPPHPQT
CEDTKERLASLNSQHEILTKHLQNLTEQMEAAQAKRAREDKAVADRVVEQ
GEGGGAASGGGGDADREEKEEKMRLARAVKELTELVRHKGRDVQVVTTDL
ELSKQRVTKVEAELERTKQSLREAREEVQRAATESVEAVSKAEHRKLLEE
VAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQVAPLQRAQRQQS
ASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLA
KALAEAEQTKAALESAKADLTRGKAAAEKERDDANAIKAKLLPQVHELRK
SLSASAAQKVSLS
back to top

mRNA from alignment at Ecto-sp8_S_contig9268:2..6887+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9268.30691.1 ID=mRNA_Ecto-sp8_S_contig9268.30691.1|Name=mRNA_Ecto-sp8_S_contig9268.30691.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6886bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9268:2..6887+ (Ectocarpus species8 EcLAC_412)
CGACAGGAGCTCGAGGCGCACGCGGGAGCCATCACCGCGCTCAGGCAGGC GGAAGATGCCCAAGACGTGAGGGCTGCCTTTTCCGATCTTGTTTGCTGTC GTTGTGGTTGGTGATGATGCTGCTGCTGCTGCTGCTGCTGCTGCCGCCTC TGCTGCTGATGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGTTG TTGATGCTGTCGTTTTGGGGAGATGCCTTTGCAGTATCTCTCGGGACGAT CTCTCCTTACAGATGCGAGCTCTGCAGTCTGCGGCTATCGTTCAAGCGCA TTCACGAACGACATTTGAATGCATACTTCCCCCCACACCTTGCTAAGTGC AAGGGTAAAAGATGGACCTCTTCTCCGACGAAAGACGAACGTCGTGCATA GTCTTGAGTACACCCACCCATCCACCGATGGTGAAGGGAACTATGTACGG CAATCAACAAGAAAGCGCCCCCCCCCACCCCCCCCAATCCTATCAACCCA TGGCTTATCTGGTTTAGCGCAGCAAACGCAAGGATGATGACCAGCTTGTG GTCCATCCTTGCGGAACGCATCTAGCCTGGGCCAGCGAAAACCCGGCGTA TCGCTCCGTCCCGGCATTTTTTGTAGGGATACGAGGGTAATGGTCTAGCG AACACGTCATGATGCGTATACATGAGTACGCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCTTCCCCCCCCCCGCTCCTTCCTTCTAGAG ACAGCGGGGGGGGAAAAGGAAGTAGTGGTGGGTGNNNNNNNNNNATTCCG CCCCCCCCCCCCCCCCCCTTTCCACGCTACCCCCTTTCTCAAAACCTGCT GTTGTCTCTTGGTTTGGCACTGCTGCATTGGTATCGACAGGCGAGTAACA GGGCCGCGAGGGACGCGCAGCATGCCAAGGACAGTCTGGCGGCGGACTTG ATTGGCGCCAGGGCTCGGTGGGAGGCCCGCGAGGCTGCTCTCAACAAGGT ACACTACGGTGGTAGCACGCATCTTGAAATGAGGTTGATACAGAACGCGC CCGCACTACCAAGGTGTTCACGCATCTTGAAATGAGGAGGTTTATACAGA AGACGCCCGCACATGAAGACCCCTCTTTGGTAAATTTCAAACATAGCCGT ATGACGTTGCTGAAGAACAGATATCGCGCCTTGCTTTTGTGCATTTTGGC TGAGGGTCGTCCGTTTCTTAGTCTTCTCTGATGCTCCCGACAGCGACTAT ATACTTGTAGGCTTCTTAATGACAGAGCACGTTTTTTCACGTTTTTTTTG TTGTTGAGCCTGAATTTCTTGTTTCCCCAAGCTTTTTTTTAAGTGCGGAC GCTAACTGTACGCGATCACGATGGTTGATGGGGCAAGGAGAAGCGGCTGA CGGTCCCAACGCGGGATGTGCAAATTTCGCCTGTCCTGTCCTGTCCTCTT GTCGAAGTACGTTAAGAACACGCAACAACCTTTGAAACCGCCTCGCGCGA GCCCTAACTCCGAGCGCTTAGTACCCACCCCCCGCCCAAAAGTGATACGG GTAGGATAGGGAAAGCATTCTTGAGGCACCTTTGGCACTGTGGGAAGGAA CGATTAGCCATCGGCGATCCATCCCGTGGGAACAATGCTAGAGGACGCGT GGCCAAAGTTAAAGCGCGCGAAGCATGAGACCCCCCCCCGCGCGCTCCCT GTGCCCCCCCCCCCACACCCACAGACATGCGAAGACACGAAGGAACGCCT GGCAAGCCTGAACTCCCAGCACGAGATCCTCACGAAGCACCTCCAGAACC TCACGGAACAGATGGAAGCCGCCCAGGCGAAGCGCGCTAGGGAGGACAAG GCCGTGGCTGACAGGGTCGTCGAGCAAGGGGAGGGCGGGGGAGGTGAGTA GTTTCGGGCTTCCGTTAGGGTCCGGTTGACAGGGGGGACGGCGGGCGGAG GTCCCCCGCTGATTGGTTGATGGTTTGATTTTTTAGGGAAGGGGAGAGGT GGGGGGGTTGAGTAGTCTCAGGCTACCATTCTTTCGGGTCGGGGTGTCGG GCGAACGGCGGGCGGAGGTCCCCCGCTGATTTTTTTCTTTTTTTTCAACT CTTTTTTTTGGCGCCGCCGCCGTGTTGACCCCCCCCCCACCGCCGGCGTG CTTGTCGCTCCTCGGCGTTGTTAGTCGGTGTTTTGGTTTGAATATATCTC GTGTGCGTGCGTGTGTTTGTTTTGTTATTAGCATCGACCGCGCTAACGGG CTGACAAGTGCTTTGTGTGTGTGTGTGTGTTTTTTTTTATTCACCCAGCT GCGAGCGGCGGCGGGGGGGACGCGGACAGGGAGGAGAAGGAGGAGAAGAT GCGTCTCGCGCGCGCCGTGAAGGAATTGACTGAACTTGTCCGCCACAAGG GCCGAGATGTCCAGGTATGTACATATGCAGTGTTTTTTTTGCTTAATCTA CAAATTAACCTTTTCCACAGACAAACAGTCTGAGATAGGTTAGCAAATCA ATTCGTGTAATAGCTGCAGCGGAACACAGCGATTTTTGTCTTTTTCGCAC TTATGGCACAACAAATATTTCATCTCTTTCACAGATAAACGAGTCTGAGA TACGTTAGCAATGCATTCATGGCGTCAGTGGAATACAGAAGTTTACGTTT GTTTGGGGGGCGGGAGCGCAGAGTAGGGGTGACGGGTCGGTGTGATTGTC GCGTTAAGGTGTAGTCTATACGCTGAGGTCGCCCACCCTTGTGCCCTTGC TGCCGTTGAAGGTGTGTGATATTCCGCCTTTGCGTACTGAAGGAGGTGTT GGTGATGGCGAGCTTGTTGTCTGTCGCGAAGTTGAGCAGTCGATTGCCGT TATCGTTCAGCTCATCGCGTCCATAAGGGCGAAGAACACCCTCCTCCGAC AGGTTGTCTCCCTCCGTTCTCTTTTGCCCGTTCGTGCATTAAGCATCCAC TAAAACATACACACACCGCTGCATGAGGTTATCGAGCTCATTCCAGAACC TATTATTTTGTCCATCATCTGCGACCTCTGTCGGTGCGTAGGCAGTTCCG AAAGTCACCGCTCCGCTCTTCTCGCTCTGTTCCTCAAACCGCATGGCCAT GAGGCGGTGGCTGGTACCGTATTCGACCGTGTAGGTGGAGTCGCGGCACA TGGACTCCTTCCGCTGCTAACCCCACCCCATGTGTCCCACCTCTCTCGCT CCCACGACAGAAAACCCTGAATCCTGCCGCTGTAAACTCCGTTTGCCCAG CCCTCCTCGTCTCCTGCATCCCCACCACGGCGATGCCTAGTTGCGCCGTT TGGTAGAGCACACTCAAGTCCGAACGTTGTAGGTAGCTACGCGTAGAGCA GAAAAGGGTTGCACCTGCCTGCGAAGAAAAAAGACACGAACCGGGTTAGC ACACACCTTTGCCAGAAAATCCAAATGGCGATTTGGCGAAAACAAATAAA AAGGAGTCGGAAAAGGAGGAGACGGGGCCGGGTGGGGCGTAGGCTGTTGC TCGGAGAGCAGCACGTGAGCCATGGGCGACACAGCGGAGCAAACTTGTAC TCTATTTAGTCTTTATACCTCAGTACTTTTGTACTAACATAAGAAAACCG ATGGATGGACGGTAAACCGCAACACCGCAGGTGGTGACGACGGACTTGGA GCTGTCGAAGCAGAGGGTGACCAAGGTAGAGGCGGAGCTGGAGCGCACGA AGCAGTCGCTCCGGGAGGCACGGGAGGAAGTCCAGAGGTAGGTACCTGCC TGCCTACCTGCCTATACATAAGACTGACTACTGTACTATATCCAGATTTG TGAGTTTTTGTTCGTGGGCGTTCACTGCGCGAGCCTTCGAGTCTCTTGGA GTCAACAACAGGCCGTTGAGCTTGGGAAATGTCACAAGTGGCAGTAGAGC TGGCAGCCAGCTGTGGGCTGATCCTGCCTGCCTGGTTTTGTGTCGCTTCA CGTCCTGATGGCACTGTTCTCTCATGGGCCCACTTCTACCTACAGTGGTG GCTACGGTTTAAGGGAGACTATATAAGAGACAGTACCGATTTAAGAGAGT CAAACTGGCTTGTCACGACCATGAAAAATACATACATTTCACAGTGCGGT TCAAGAGAAAACCGGATTTAAGAGAGAAACACTGGCTTGTCACGACCCTC TCTTAAACCGTGTCCACCACTGCTGTATGTAAATACCGTCTTTTTTATCA CCGCATGTTTGCTTGCGCTGTTGTGCCAGGGCGGCGACCGAGAGCGTGGA GGCCGTCTCCAAGGCAGAGCACAGGAAACTCCTGGAAGAGGTGGCCCAGA TCAGCACCCTTCGCGAGAGCAACGACATGCTCCGGAGCAAGCTCGGGGAC GCGGAGCGCAGGAGCCGTACGGCCGAAGGGAGGTGCGTGCCTATTTTTTT TCACAAGTATAAAAAGTGTGGGGTGTATGCCTTGCCAGCGTGATTTCACC TTGGCTAGCTGCGTCGTTCATGTAAATTGTCATCTCTCTTTTCCGTGCTT GCCTTGTTGTGCGCGCGAAGCGTGGGGTGTATACCTTGGCCCGCGACTGC ACCTTAGGCTAGCTGCGTCGTTCGTGTAAATTGTTTTCTCTCTTTTCCGT GCTTGCCTTGTTATGCGTGCGAAGCGTGGGATGAATACACTGCCCCATGA TTTTTGCACCTTTGAGGCCATCAGTGCATTTGTTGGTGCAGTCTCCGGTT GTGCAAGAGAACAACAGCAGTCCGGGGTCTCTTGTGCGTACGACGTGCTG GTGTTCGTCACAGCATGCTGCGTGCGTGCGAAGCGAAGGGCTGACATCAT GGTGTTGTTGAAACGTGTGTGATGCCACTTCTGTGTGACGGTGTGACGGA CACATGACTAGCCCACTCTTGGGGCTGGCAAGTTTGGACTATAACAAGTA GAAATTTCCTCAACATGGTTTGGAGCTTGAAGTTTTTTTCGTGCAAAAGC CATAACGAATTAGTCGCTATCTACAGATAGGAGCATTGTCTTCATAGGGT TACAGCAACGACCAATCTGTGTTTCCGCTGCTGTTCCCCGAGCAGCATGT ACAGCGATATCTCCCCTGTGGGTAACAGGTTTGAAACCGTATAAATAGTT GAACCCGAACCCGAGCCTGAACTTATTTGGGTCGCGAAGAGGCACGCAAA CAACACACGCTTCTTTGTGTGAATCCTCATCCACGTCCCGAGTTTCACCC CAATCACTAGTGTTTCGCTTGTTCTGCTAAATATTCATAAGCCGTGAGTT GTTTGTGGGGCTCTCTCGGAACCGTTTTCGTGAAAAACCTTGCATCCCAA TCACATTTTTGAGCTGTCTCCTGCTACGCGTGCGCACGCCGTGAATTGTT TGTTGGGCTCTCTTTTGTCGCGAATATAGCCTGAGCCAGCTGCGTGCCCA GGTGGCTCCGCTCCAGCGTGCGCAGAGGCAGCAGTCGGCGTCATCGGCAT CCCTTGCCTCGGAGAAGGAAAGCCTCCGCAAGGAGGTGGAAAACTGGAAG AAGCGCGTCACCAGCCTCACCGCCAGTTTCAACGCGGTAAACCTCCAATC TGTAGCACATTGTTGTTGTTGTTGTTGGGTGTTGGGTATGATGTTTTTGT TGTTGTTGATGGGGTTGGGGTTGGAGTTGGTACTGGTGCTGTTGTGGTTG CCGTTGTTGTTGCTGTTGCTGTTGTTGTTATTTCTTATTTTCTTGTATTG TTGTTGTTATTGTTGATGACCGATTGTCGTTGGTTTTGATTATGTTGTTG ATGATCATGCTGCTATTGCCGTTGCCGTTGCTGTTGCTGTTGCTGTTGTT TTTTCTTCTAGCGTTGTTGTCGTTGTTGTTGTTGATGACGATGTTGTCGT TGATCTTGATTTGTGTTGTTAATGATTATGATGTTGGTGGTGCTGTTGTT GTTGTTGTCGTTGTTGTCGTTGTTATCGTTGTTGATGACGATGTTGTCGT TGATTTCGATTATGTTGTTGATGATGATGATGTTGTTGGTGTTGTTGTCA TTGTTGTTGTGGTGTTAGGTGGACCCCAAGGACCACGAAGACGTTATCGC CGAGAAGGAGCGGCTGGCCAAGGCCCTCGCCGAAGCGGAGCAAACGAAGG CCGCCCTGGAGAGCGCCAAGGCCGACCTCACCCGCGGCAAGGCAGCGGCG GAGAAAGAGCGGGACGACGCCAACGCCATCAAGGCCAAGCTCCTCCCTCA GGTGAACGGGAGGAAGGAAAGCTCTGTTGTTTTTATTTTTGTTAATATGA CACAATGAATCCATCTCTATCCATAGAAAAGAGTCTAGGATAGATTTAAA TAGCAATTAATTCATAGCGTCTTCACATTGAAAATCTACAGTTTTTTTTT TTTTGTCATCACTTCAAATCAGCGCTTTACGGCGTTCGTGCCATGTACTC CAACCCGTGGTCACGCAGAAGGGTCCCTCTCCCTGAGACACACTACCCAC CCCTCCTGGGGTGCTTTGCCTTCAATTTTTTATGCGAGAAGAGTTCAGCA CTCTCTTCCCTCTGTGTACACACGAACAAAATAGCGCTTTCCACCCAAGA CCAGGAACGGAAGCGAGAGGAAAACTCACTTTGCAAGAAAAATGCTCGCT TCCGCCGATGATTGGAACAGCACATGTGCAGAGAGAAACGGTGCTCCGAT GAGATCCATCCGCGCTTTTTGTGATGTAGAGCTATGCAACAACAAAAATG CACGATCCTCCCGTAAACCTCAAACAGGGGAGCGAGCGTCTCTTTCTCTT TCGCGCGGAGGCATTTGTCGCTTTTGCATATTCTTTCATAAAATGTCTCC TTTTTTCCCCATGCCCGCCTTTTGTTAAGGTGCACGAGCTGAGGAAGTCG CTTTCTGCTTCGGCCGCCCAAAAGGTAAGCCTTTCT
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9268:2..6887+

>mRNA_Ecto-sp8_S_contig9268.30691.1 ID=mRNA_Ecto-sp8_S_contig9268.30691.1|Name=mRNA_Ecto-sp8_S_contig9268.30691.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1089bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9268:2..6887+ (Ectocarpus species8 EcLAC_412)
CGACAGGAGCTCGAGGCGCACGCGGGAGCCATCACCGCGCTCAGGCAGGC
GGAAGATGCCCAAGACGACGCGTGGCCAAAGTTAAAGCGCGCGAAGCATG
AGACCCCCCCCCGCGCGCTCCCTGTGCCCCCCCCCCCACACCCACAGACA
TGCGAAGACACGAAGGAACGCCTGGCAAGCCTGAACTCCCAGCACGAGAT
CCTCACGAAGCACCTCCAGAACCTCACGGAACAGATGGAAGCCGCCCAGG
CGAAGCGCGCTAGGGAGGACAAGGCCGTGGCTGACAGGGTCGTCGAGCAA
GGGGAGGGCGGGGGAGCTGCGAGCGGCGGCGGGGGGGACGCGGACAGGGA
GGAGAAGGAGGAGAAGATGCGTCTCGCGCGCGCCGTGAAGGAATTGACTG
AACTTGTCCGCCACAAGGGCCGAGATGTCCAGGTGGTGACGACGGACTTG
GAGCTGTCGAAGCAGAGGGTGACCAAGGTAGAGGCGGAGCTGGAGCGCAC
GAAGCAGTCGCTCCGGGAGGCACGGGAGGAAGTCCAGAGGGCGGCGACCG
AGAGCGTGGAGGCCGTCTCCAAGGCAGAGCACAGGAAACTCCTGGAAGAG
GTGGCCCAGATCAGCACCCTTCGCGAGAGCAACGACATGCTCCGGAGCAA
GCTCGGGGACGCGGAGCGCAGGAGCCGTACGGCCGAAGGGAGCCTGAGCC
AGCTGCGTGCCCAGGTGGCTCCGCTCCAGCGTGCGCAGAGGCAGCAGTCG
GCGTCATCGGCATCCCTTGCCTCGGAGAAGGAAAGCCTCCGCAAGGAGGT
GGAAAACTGGAAGAAGCGCGTCACCAGCCTCACCGCCAGTTTCAACGCGG
TGGACCCCAAGGACCACGAAGACGTTATCGCCGAGAAGGAGCGGCTGGCC
AAGGCCCTCGCCGAAGCGGAGCAAACGAAGGCCGCCCTGGAGAGCGCCAA
GGCCGACCTCACCCGCGGCAAGGCAGCGGCGGAGAAAGAGCGGGACGACG
CCAACGCCATCAAGGCCAAGCTCCTCCCTCAGGTGCACGAGCTGAGGAAG
TCGCTTTCTGCTTCGGCCGCCCAAAAGGTAAGCCTTTCT
back to top