mRNA_Ecto-sp8_S_contig9263.30683.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: D8LL80_ECTSI (Calcium ion binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL80_ECTSI) HSP 1 Score: 476 bits (1226), Expect = 6.430e-167 Identity = 262/276 (94.93%), Postives = 270/276 (97.83%), Query Frame = 1
Query: 1 KMADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAGRRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTADELAMEAEAAAAAELKREGGQARRKSSVSVARKTSVMAKEISRRISSAFLPQVDSAADPGGSNNDDASDLAASSPKDAVGASAATGPPVKSAMSPSALASGRKSHAANRSVGFAGGSEKAEEEESMKGGAGA 828
KMADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPA AEAEAAARAAGRRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTADELAMEAEAAAAAE KREGGQ+RRKSSVSVARKTSVMAKEI+RRISSA LPQ+DSAADPGGSNNDDA+D AASSPK+A GASAAT PPVKSAMSPSALASG+KSHAAN+SVGFAGGSEKA+EEESMKGGAGA
Sbjct: 103 KMADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPATAEAEAAARAAGRRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTADELAMEAEAAAAAESKREGGQSRRKSSVSVARKTSVMAKEITRRISSALLPQIDSAADPGGSNNDDANDPAASSPKNATGASAATRPPVKSAMSPSALASGQKSHAANKSVGFAGGSEKAKEEESMKGGAGA 378
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: A0A7S3XZL5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZL5_HETAK) HSP 1 Score: 111 bits (277), Expect = 3.520e-24 Identity = 72/169 (42.60%), Postives = 87/169 (51.48%), Query Frame = 1
Query: 31 LTMKQFLVVLAMGYVLDAIPDLM---ENPANAEAEAAAR---------------------AAG----------RRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTAD 435
L +K+FLV L +GYVL+ IPDL+ E AN E + +AG RR SNFY EQ + + L YLLFD + +G I R V V E G K+ + S+ERW EMDWD NG ISF EFVYAFT+WVDVD ED AD
Sbjct: 116 LNLKEFLVALTVGYVLEVIPDLLAEAEERANNMNEMSVMIRNAPEEYELEEERSMTMVPSSAGNTVRRRPKRRRRSSNFYGLEQELCYVMHLIVGCYLLFDTKGRGYIRRRDVGAAVRERGGKEGSASGFFSEERWGEMDWDHNGSISFEEFVYAFTRWVDVDDEDEAD 284
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: A0A482T3U5_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3U5_9ARCH) HSP 1 Score: 72.8 bits (177), Expect = 1.640e-11 Identity = 47/115 (40.87%), Postives = 62/115 (53.91%), Query Frame = 1
Query: 10 DFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAG---RRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEM 345
D E +TMK+FLV L +G VLDAIP L P +A A A A R S ++ L L AYL+FD E KG I R V ++ E+G K G ++LSQ+RW++M
Sbjct: 108 DVQETNVITMKEFLVALTIGMVLDAIPALA-TPHDASGTAGAPAKPSLKRSFSGLLGHNSEIKEMLNLIVSAYLIFDPEGKGYIERSSVEKLLDEHGAKQGGGNAMLSQQRWNDM 221
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: A0A067CAK8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAK8_SAPPC) HSP 1 Score: 72.4 bits (176), Expect = 4.790e-11 Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 1
Query: 7 ADFYEDKQLTMKQFLVVLAMGYVLDAIPDL--MENPANAEAEAAARAAGRRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSI---------------------LSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGED 426
AD E+ QL+ K+FLV LAMG+VL IP L E P + A + + + +R A +L +L FD + G+I +E+++ + E+ + + + +SQ+R++EMDWD +G I+F EF+ AF WV VD +D
Sbjct: 119 ADMAENGQLSFKEFLVCLAMGFVLHRIPALETTETPQLSIFYAPLAGKTEPKTLLFGEGNKLRQAFQLAVDVFLWFDMDGDGLIEKEEMLRRLTESMHEHSPTKKMSKARKLGSTTKSGSTCPANAFISQKRFNEMDWDHDGSITFKEFLMAFESWVGVDDDD 281
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: A0A0B0MQV4_GOSAR (Putative calcium-binding CML21-like protein n=12 Tax=Gossypium TaxID=3633 RepID=A0A0B0MQV4_GOSAR) HSP 1 Score: 70.9 bits (172), Expect = 6.510e-11 Identity = 46/147 (31.29%), Postives = 77/147 (52.38%), Query Frame = 1
Query: 1 KMADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAGRRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVD-GEDTADE 438
K DF ++ + +F+V+L + Y+L +N E G+ N E T E F A++ DK G +S+ +++ + E+G++ G +++ +R++EMDWD NG +SF EF++AFT WV +D ED DE
Sbjct: 85 KACDFNQNMGIKFNEFIVLLCLVYLLK------DNAPGHE--------GKSRMGMPNLEAT----FETFVDAFVFLDKNKDGFVSKNEMVQAINESGERSSGRIAM---KRFEEMDWDKNGSVSFKEFLFAFTNWVGIDDAEDDEDE 210
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: D8SHN1_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SHN1_SELML) HSP 1 Score: 71.2 bits (173), Expect = 7.230e-11 Identity = 45/150 (30.00%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 7 ADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAGRRMSNFYNK------EQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTADE 438
+D + K + K+F++VLA+ Y+L + P + E + G ++ N ++ E T ++ F + FDK+ G +SR++++ + E S + +R++EMDWD NG I+F EF++AFT WV ++ E+ ADE
Sbjct: 99 SDMDKSKGVDFKEFIIVLALVYLLG---ETGAKPVKQKEEDKGK--GSQLKNLKSRIGLAELESTFETIVDTFRF----FDKDGDGYVSRKEMITAINEASPGQSSSGESIGVKRFEEMDWDKNGMITFKEFLFAFTDWVGIEEEEDADE 239
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: A0A1V9Z9T1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9T1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.240e-10 Identity = 55/167 (32.93%), Postives = 85/167 (50.90%), Query Frame = 1
Query: 7 ADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAGRRMSN-------FYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAEN-------------------GQKDEGSM----SILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVD 417
AD E+ QL+ K+FLV LA+G+VL IP E+ E E + A +SN + + +R A +L +L FD + G+I +E++ + E+ GQK +G + +SQ+R++EMDWD++G I+F EF+ AF WV VD
Sbjct: 116 ADMAENGQLSFKEFLVCLAIGFVLHRIPAFEES----EKELSIFYAP--LSNTTEPKTLLFGEGNKLRQAFQLAVDVFLWFDIDGNGLIQKEEMQSRLYESMHEHSPTKKMSKARVAKMAGQKTQGKSCPANAFISQKRFNEMDWDNDGSITFKEFLMAFESWVGVD 276
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: A0A813C2D6_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C2D6_9DINO) HSP 1 Score: 70.9 bits (172), Expect = 2.010e-10 Identity = 54/193 (27.98%), Postives = 93/193 (48.19%), Query Frame = 1
Query: 7 ADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENP-ANAEAEAAARAAGRRMSNF----------------YNKEQTVRNA------------------------LELFTYAYLLFDKECKGVISREQVM----IVVAENGQKDEG-------SMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDT 429
ADFY+++QLT ++F+V LA+GY+L IP L P A ++A AA + A + + + QT+ + L A+ FD + G+I +E++ + A++G K ++S L++ER++E+DWD +G ++F EF++AF WV +D ED+
Sbjct: 112 ADFYDNEQLTFREFVVSLALGYLLGQIPILDAMPVARSDAGAAVKEANAKQAAMDAGEDVEVDTEQPAARSRRSQTISRSKVQKMSSMSEGQLLGSEGAAIAYSFTLVLEAFFYFDPKHTGMIKKEELASSMAALSAQSGAKGVSPHGHSGEALSFLTEERYNELDWDHDGSVTFKEFLFAFMAWVGLDDEDS 304
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: K3WUQ5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUQ5_GLOUD) HSP 1 Score: 68.9 bits (167), Expect = 5.850e-10 Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 7 ADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPAN---AEAEAAARAAGR-RMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAENGQ------------------KDEGSMSI---LSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTAD 435
+D ED +L K+FLV LA+G+VL IP L + A + AG + + + +R A +L A+L FD + G+I+++++ + + + Q K+ G MSI + + R++EMDW+++G I F EF+ AF WV +D +D D
Sbjct: 91 SDMLEDGRLNFKEFLVCLAIGFVLHKIPSLERERLSIFYAPLATKDKEAGPPNQALLFGEGNKLRIAFQLAVDAFLWFDVDGNGLINKDEMAMRLGTSTQLHSPTKKTSTLKERAGFHKESGEMSINAEIWERRFNEMDWNNDGTIQFKEFLMAFESWVGLDDDDLVD 258
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Match: K3YVI1_SETIT (Uncharacterized protein n=13 Tax=Poaceae TaxID=4479 RepID=K3YVI1_SETIT) HSP 1 Score: 67.8 bits (164), Expect = 9.640e-10 Identity = 44/145 (30.34%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 10 DFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAGRRMSNFYNKEQTVRNALELFTYAYLLFDKECKGVISREQVMIVVAEN--GQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTADE 438
D YE + +F+V L + Y+L+ +PA +EA R+ + E T +E F + DK G +S+ +++ + E G++ G + + +R++EMDWD NG ++F EF++AFT+WV +D ED +E
Sbjct: 101 DIYEHMGMKFNEFIVFLCLVYLLN-------DPAVSEA--------RKRMGLGSLEPTFETLVESFVF----LDKNKDGYVSKNEMIQAINETTAGERSSGRIGV---KRFEEMDWDKNGTVTFKEFLFAFTRWVGIDNEDDDEE 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9263.30683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9263.30683.1 >prot_Ecto-sp8_S_contig9263.30683.1 ID=prot_Ecto-sp8_S_contig9263.30683.1|Name=mRNA_Ecto-sp8_S_contig9263.30683.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=276bp MADFYEDKQLTMKQFLVVLAMGYVLDAIPDLMENPANAEAEAAARAAGRRback to top mRNA from alignment at Ecto-sp8_S_contig9263:33..3676+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9263.30683.1 ID=mRNA_Ecto-sp8_S_contig9263.30683.1|Name=mRNA_Ecto-sp8_S_contig9263.30683.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3644bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9263:33..3676+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9263:33..3676+ >mRNA_Ecto-sp8_S_contig9263.30683.1 ID=mRNA_Ecto-sp8_S_contig9263.30683.1|Name=mRNA_Ecto-sp8_S_contig9263.30683.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=828bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9263:33..3676+ (Ectocarpus species8 EcLAC_412)back to top |