mRNA_Ecto-sp8_S_contig92403.30643.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: D7FMX9_ECTSI (Boron transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX9_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 3.210e-18 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 1
Query: 4 LFQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
L QIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP
Sbjct: 678 LAQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 718
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A6H5JQF4_9PHAE (HCO3_cotransp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF4_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.360e-16 Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 1
Query: 4 LFQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
L QIPLPVTTGLFLYLGVTGLAGNEMW+RTKLL TDP LRP
Sbjct: 156 LAQIPLPVTTGLFLYLGVTGLAGNEMWERTKLLVTDPNLRP 196
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A4D9DEQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEQ9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 7.280e-9 Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 10 QIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
Q+PL V GLFLYLG + LAGN+MW+R KLL TDP RP
Sbjct: 493 QVPLAVLMGLFLYLGKSSLAGNQMWERLKLLITDPAQRP 531
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A0G4GX26_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX26_VITBC) HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 13 IPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
+P V GLFL+LGV+ LAGNEMW RTKL T+PKL P
Sbjct: 472 LPEAVLKGLFLFLGVSTLAGNEMWQRTKLFVTEPKLAP 509
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: C1MM55_MICPC (Anion exchanger family n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MM55_MICPC) HSP 1 Score: 53.5 bits (127), Expect = 4.260e-7 Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 10 QIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
+IP+ V GLFLYLG+TGLA ++ W R K++F DP+L P
Sbjct: 338 EIPMAVLYGLFLYLGITGLATSQFWTRIKMIFMDPRLLP 376
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A7S4J9J5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9J5_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.090e-6 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 4 LFQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
L Q+PLPV +G+FLYLG+T L G E+WDR + LF D + P
Sbjct: 404 LTQVPLPVLSGVFLYLGLTSLQGLELWDRVRGLFQDATVAP 444
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A7S2URZ4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URZ4_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.380e-6 Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 4 LFQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
L Q+PLPV +G+F+YLG+T L G E+WDR + LF D + P
Sbjct: 104 LSQVPLPVLSGVFMYLGLTSLQGLELWDRIRGLFQDSSVAP 144
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: C1E204_MICCC (Anion exchanger family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E204_MICCC) HSP 1 Score: 51.6 bits (122), Expect = 2.030e-6 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 10 QIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
QIP+ V GLFLY+G+TGLA +++W R K++ DP+L P
Sbjct: 718 QIPMAVLYGLFLYMGITGLATSQLWTRIKMIAMDPRLLP 756
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A7S0NMS8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NMS8_MICPS) HSP 1 Score: 50.4 bits (119), Expect = 5.210e-6 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 10 QIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
+IP+ V GLFLY+G+TGLA +++W R K++ DP+L P
Sbjct: 724 EIPMAVLYGLFLYMGITGLATSQLWTRMKMIAMDPRLLP 762
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Match: A0A7S0SIG3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SIG3_9CHLO) HSP 1 Score: 50.4 bits (119), Expect = 5.220e-6 Identity = 20/42 (47.62%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 VLFQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRP 126
VL ++P+ V GLFL++G+TGLA ++ W R K++F +P+L P
Sbjct: 321 VLREVPMAVLYGLFLFMGITGLATSQFWTRIKMIFMEPRLLP 362 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92403.30643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig92403.30643.1 >prot_Ecto-sp8_S_contig92403.30643.1 ID=prot_Ecto-sp8_S_contig92403.30643.1|Name=mRNA_Ecto-sp8_S_contig92403.30643.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=42bp VLFQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRPback to top mRNA from alignment at Ecto-sp8_S_contig92403:460..585+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig92403.30643.1 ID=mRNA_Ecto-sp8_S_contig92403.30643.1|Name=mRNA_Ecto-sp8_S_contig92403.30643.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=126bp|location=Sequence derived from alignment at Ecto-sp8_S_contig92403:460..585+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig92403:460..585+ >mRNA_Ecto-sp8_S_contig92403.30643.1 ID=mRNA_Ecto-sp8_S_contig92403.30643.1|Name=mRNA_Ecto-sp8_S_contig92403.30643.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=126bp|location=Sequence derived from alignment at Ecto-sp8_S_contig92403:460..585+ (Ectocarpus species8 EcLAC_412)back to top |