mRNA_Ecto-sp8_S_contig9237.30631.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: D8LE31_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE31_ECTSI) HSP 1 Score: 176 bits (445), Expect = 5.140e-54 Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 1
Query: 88 MLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
MLQCSLKEYLGFTDSRLTEVADAVFSTFDDDK NHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL
Sbjct: 1 MLQCSLKEYLGFTDSRLTEVADAVFSTFDDDK---NHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 91
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.150e-37 Identity = 74/123 (60.16%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 1 VPRACVLDLWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
VP A V LW+AFND+AEG GLT E E+L+ LK+ LG+ + +L ++ ++F DDD+ N LIDALE LA+L +SGM+ EQKI +IFGI+DFDESGVL+VDETILALRST+SGLCKL
Sbjct: 20 VPSASVHHLWDAFNDIAEGMGLTSDETCEILRVCLKDVLGYAEKKLDALSRSLFVALDDDQ---NELIDALEFLAALGALSGMSQEQKITFIFGIFDFDESGVLTVDETILALRSTLSGLCKL 139
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A7S3JVR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVR1_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.560e-37 Identity = 70/123 (56.91%), Postives = 95/123 (77.24%), Query Frame = 1
Query: 1 VPRACVLDLWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
+P C+ +LW+AFNDVAEGFGLT E E+L+ +L+E+LG+T+ +L ++ +FS DDDK N L DALE L+ L I+SGM+ +K+ ++FG+YDFDESGVL+VDE IL LRST+SGLCKL
Sbjct: 20 LPCRCIHELWKAFNDVAEGFGLTREEMIEILRVALREFLGYTEKKLENLSRELFSILDDDK---NDLADALEFLSCLCIISGMSAREKMVFVFGMYDFDESGVLTVDEMILLLRSTLSGLCKL 139
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A7S2KZJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZJ6_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.100e-29 Identity = 50/102 (49.02%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 1 VPRACVLDLWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESG 306
+P V +LWEAFNDVAEGFGL I EF++M++ S+K++ G +D RL +++ +F +DDD N ++D+ E L+S+AI+S M+ +K+RY++ IYDFDESG
Sbjct: 20 LPHKTVQELWEAFNDVAEGFGLNIDEFQDMIRLSVKDFTGISDKRLNALSEVLFRVYDDD---CNSMVDSFEFLSSIAILSSMSNVEKLRYLYRIYDFDESG 118
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A835ZKM6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM6_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.680e-28 Identity = 68/168 (40.48%), Postives = 92/168 (54.76%), Query Frame = 1
Query: 1 VPRACVLDLWEAFNDVAEGFGLTIIEFREMLQCSLKEYL---------------------------------------------GFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
+P+ V DLWEAFNDVAEGFGL+ E R+ML +L+ +L +D++ VADA+F+ DDD+ N L+DALE L +A++SGM++ K R++F IYDFDESG LS DE +LALRST+SG+ KL
Sbjct: 21 LPKPRVYDLWEAFNDVAEGFGLSPEEVRDMLHAALRAHLRSAQPQLPPFRYLLPHSLHTPCVSRPHCSXXXXXXXXXXXXXXXXXLSDAQRDGVADALFTALDDDR---NGLVDALELLGGVALLSGMSLADKARFVFAIYDFDESGRLSADEMVLALRSTVSGISKL 185
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A7S3H5W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5W4_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.160e-28 Identity = 53/98 (54.08%), Postives = 76/98 (77.55%), Query Frame = 1
Query: 76 EFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
EF+E+++ ++ EYL T+ +L DAVF FDDD+ N L+D+LE L++ AI+SGMT E+KIR+IF +YDFDESGVL++DE +L+ RS++SGL KL
Sbjct: 2 EFQEIVKSAIMEYLSVTERQLNFDTDAVFRLFDDDE---NKLVDSLEFLSAFAILSGMTPEEKIRFIFAMYDFDESGVLTLDEMVLSFRSSLSGLAKL 96
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A8J5J1R4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J1R4_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.320e-25 Identity = 53/115 (46.09%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 25 LWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
LWE+FNDVAEGFGL+ E E+ + + S + +++ A+F+ D D+V N L+DALE L ++A+MS M I QK+ +++ YDF+E+G LS+DE LA +ST++GLCKL
Sbjct: 28 LWESFNDVAEGFGLSQDELVEICRSMQQTLEIHARSEMDQLSAALFAALDTDEVMENGLVDALEFLGTMAMMSAMPIPQKVTFVYNCYDFNETGQLSLDELTLAFKSTLTGLCKL 142
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A8K1C8I5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8I5_PYTOL) HSP 1 Score: 107 bits (266), Expect = 1.860e-24 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 1
Query: 25 LWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
LWEAFNDVAEGFGL E E+ + + + ++ +F+ FD D+ N L+DALE L ++AIMS MTI QK+ +++ YDF+ES +S+DE LALRST++GLCKL
Sbjct: 28 LWEAFNDVAEGFGLNQDEMCEICRSLMPTLEIHAKIDMDQLTIPLFNAFDTDE---NGLVDALEFLGTIAIMSAMTIRQKLTFVYNCYDFNESSQISIDELTLALRSTLTGLCKL 139
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A7S2FF76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FF76_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.940e-24 Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 1 VPRACVLDLWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQ 261
+P+A V DLW+ FND++EGFGLT EF E+L+C LK+YL +++ +L + AVF +DDD+ N L+DALE L+S AI+SGM E+
Sbjct: 20 LPKASVYDLWDGFNDISEGFGLTCDEFLEILRCCLKDYLNYSEKKLDNIGKAVFIIYDDDQ---NDLVDALEFLSSFAILSGMVPEE 103
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Match: A0A3R7XU11_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7XU11_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.270e-24 Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 7 RACVLDL--------WEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVADAVFSTFDDDKVGINHLIDALECLASLAIMSGMTIEQKIRYIFGIYDFDESGVLSVDETILALRSTISGLCKL 369
RACV + WE+FNDVAEGFG+ +E ++ + + + + +F D D+ N L+DALE L +LA++S MTI QKI +++ YDF+ESG +++DE LA++ST++GLCKL
Sbjct: 5 RACVYTVSEKDVNKCWESFNDVAEGFGINRVEMIDICSPLQDTFEIKAKAEMERITGLLFDAMDTDE---NGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKL 130 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9237.30631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9237.30631.1 >prot_Ecto-sp8_S_contig9237.30631.1 ID=prot_Ecto-sp8_S_contig9237.30631.1|Name=mRNA_Ecto-sp8_S_contig9237.30631.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=123bp VPRACVLDLWEAFNDVAEGFGLTIIEFREMLQCSLKEYLGFTDSRLTEVAback to top mRNA from alignment at Ecto-sp8_S_contig9237:6032..7043+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9237.30631.1 ID=mRNA_Ecto-sp8_S_contig9237.30631.1|Name=mRNA_Ecto-sp8_S_contig9237.30631.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1012bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9237:6032..7043+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9237:6032..7043+ >mRNA_Ecto-sp8_S_contig9237.30631.1 ID=mRNA_Ecto-sp8_S_contig9237.30631.1|Name=mRNA_Ecto-sp8_S_contig9237.30631.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9237:6032..7043+ (Ectocarpus species8 EcLAC_412)back to top |